mRNA_Ecto-sp6_S_contig100.691.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.691.1
Unique NamemRNA_Ecto-sp6_S_contig100.691.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: D7FKI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI1_ECTSI)

HSP 1 Score: 725 bits (1871), Expect = 1.990e-257
Identity = 395/401 (98.50%), Postives = 401/401 (100.00%), Query Frame = 1
Query:  136 MHVQRPKQQSHPGQNNNWLRLGSGCNKYNPALVTRGGADVSKTQPEKSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAEAREAAAGAAQNPPNGGN 1338
            MHVQRPKQQSHPGQ+NNWLRLGSGCNKYNPALVTRGGADVSKTQPE+SPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVG+GLSRVLAAGG+HPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVV+TPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLP+VHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAEAREAAAGAAQNPPNGGN
Sbjct:    1 MHVQRPKQQSHPGQHNNWLRLGSGCNKYNPALVTRGGADVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGVGLSRVLAAGGVHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPIVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAEAREAAAGAAQNPPNGGN 401          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S2SW23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW23_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.000e-72
Identity = 153/332 (46.08%), Postives = 207/332 (62.35%), Query Frame = 1
Query:  337 AMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAG-----GMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAP-TLRTRAEAREAAAG 1308
            A V  A + P  G  GG+L   + V    VSL+F L GL + L EL  AALN RLN L Q F+L   PA+  GL ++L        G    L DG+++  C+PTTVNMCV+LTQSA GN A A FNAVLGNLLG+V+TP  +LLLL +    A S L   KKL IKV++P+ LGQ  RFTP+  +  +  K  SR SE +LLS+++TTFCDTF+    +              LM  LP++HL +LA + +LSR+P L++   +++A  FC + KT+AFGIPL+K +FEG+PSL +++ PLL+YHP +L++GSAL P   R  A+  E   G
Sbjct:    2 ASVLVAAMNPGLGAKGGVLRPEMWVDVGAVSLIFVLSGLGLPLKELRSAALNMRLNFLVQGFNLVAAPAIVFGLRQILEPLSNQWLGSTAWLWDGLIVGACVPTTVNMCVVLTQSAGGNVATALFNAVLGNLLGIVVTPLSILLLLNQATSTA-SFLTVLKKLAIKVLVPVGLGQALRFTPVLAVRNKHKKLFSRASETLLLSVVFTTFCDTFSRRVSIG-------LPNLLGLMVCLPLLHLAALATVFSLSRLPALQLRRDEQVAAAFCASQKTVAFGIPLLKTIFEGNPSLALISAPLLIYHPLQLVVGSALVPFAQRYIAQGEEGRGG 325          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A835Z827_9STRA (Putative sodium bile acid cotransporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z827_9STRA)

HSP 1 Score: 238 bits (607), Expect = 6.320e-68
Identity = 157/341 (46.04%), Postives = 203/341 (59.53%), Query Frame = 1
Query:  301 FLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAA--AFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPL-RKLHERKPKAISRFSECVLLSIIYTTFCDTFT--NSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPS----LGMLATPLLLYHPSELMLGSALAPTLRTRAEA 1290
            FLN  FF+LG   +V +A++ P  G TGGLL   L V KA ++ +FFL G   +L +L  AA N RLN L Q F+LG+LP VG+G  + LAA  M P L +GV  +MCLPTT++M V+L+Q+A G  A A  AFNAV GNLLG+V+TPAL+L  L   +     L+ +  +LG KVV PLA G L R  P  R+  +R  + +SR SE VLL+I+Y TFCD        G    A         +L A L V+   SL A  A++    L   E     VMF G HKTL+FGIPL+K +F G  S    L  L+ PLLLYHP EL++GSAL P L+ + EA
Sbjct:   51 FLNDNFFILGLVGVVTSAKIAPGLGCTGGLLRPELVVGKAAIAAIFFLTGFRTELRDLGYAAKNTRLNALVQGFNLGLLPLVGLGAGKALAALRMSPVLCEGVTAMMCLPTTISMSVVLSQAAGGAAAGAGAAFNAVAGNLLGLVVTPALILTTLPGGVRGEVQLIKSLLQLGSKVVAPLATGSLLRLVPAAREWQQRYKQPLSRLSEAVLLAIVYNTFCDALVPGKPGGAGALAGVLSPRDAFLLPAALVVLQAASLTAGAAIAHAADLPPQELP--VVMFAGAHKTLSFGIPLLKTMFGGPGSDPVRLAALSAPLLLYHPLELLIGSALVPKLQAKLEA 389          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S2MPW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MPW2_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.800e-67
Identity = 142/311 (45.66%), Postives = 191/311 (61.41%), Query Frame = 1
Query:  364 PSPGTTGGLLS--LSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGM-HPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAE 1287
            PS G  GG+L   L+V    VS +F L GLA+   ELA AAL+ RLN L Q  +L ++P + I L  +L A  +  P++ DG+L + CLPTTVNMC++LTQSA GN A + FNAVLGN+LGV +TP  +  LLG  L +  S L    KL  KV+LP+ +GQL R T L     R  K   R SE +LLSI+YTTFCDTF    G               L A+LP+ HL+      A++R+P LK+    ++A  F  +HKTLAFG+PL+K LF+GHP+L ++  PLL+ HP +L++GS L P+L+   E
Sbjct:    7 PSLGAKGGILKPELTVDLFAVSTIFLLNGLALPSRELAKAALDIRLNGLIQFINLVLVPFLAIPLCAILRASSLIEPSVVDGLLAMACLPTTVNMCIVLTQSASGNVAVSLFNAVLGNMLGVFVTPLAIFTLLGTNL-VGVSYLQVMAKLSKKVLLPVVIGQLLRGTKLAAYRARHKKVFGRVSEVLLLSIVYTTFCDTFVKGYG------FIQFQTLAFLFALLPLCHLIVFRFTLAVTRLPVLKLGRDKQVAAAFVSSHKTLAFGVPLLKTLFQGHPNLALICAPLLIIHPLQLLIGSTLVPSLKRYVE 310          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S0NFI1_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NFI1_9EUKA)

HSP 1 Score: 231 bits (589), Expect = 8.230e-66
Identity = 159/361 (44.04%), Postives = 214/361 (59.28%), Query Frame = 1
Query:  229 LVTRGGADVSKTQPEKSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAEAREAAA 1305
            L+  GG D +  +     Y  +  FL++R+FL+GAA+ VA A + P+ G TGG     L+V+      +FFL GL +   ELA AA   R +   Q  +L VLP +   ++ +L A  +   L  G+L +  LPTTVNMCV LT+SA GN A A FNAV+GN+LGVV+TP LLLLLLG   D+  S++    KL  KVV+PL +GQL R      L  RK K +SR SE +LL+I+YTTFCDTF    G+  +          +L A+L   H+  L     L+++  L +  RDRIA + C THKTLA G+PL K +F G   L +L TPLLL HP +L++GS LAP L+  AEA +A A
Sbjct:   11 LLRGGGDDATAARV----YRAVTGFLDRRYFLVGAASAVAMAAIAPTIGCTGGFFRPELTVNWGATCGIFFLSGLTLPTSELAAAAFRVREHTAIQGVNLIVLPLIMWSITTLLGAR-ISATLRAGLLAMSALPTTVNMCVALTRSAGGNEALAIFNAVIGNVLGVVVTPPLLLLLLGASADI--SIVDAMTKLTKKVVVPLVVGQLVRPALADALKGRK-KLLSRSSETLLLAIVYTTFCDTFLRGFGMPASTVA-------LLGALLAAGHVACLGLTWQLAKL--LGLQARDRIAFIMCSTHKTLALGLPLFKVIFAGRSDLAVLCTPLLLQHPLQLIIGSILAPRLKKIAEAEDAGA 354          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A8J2SZL0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZL0_9STRA)

HSP 1 Score: 218 bits (556), Expect = 3.940e-60
Identity = 140/351 (39.89%), Postives = 202/351 (57.55%), Query Frame = 1
Query:  232 VTRGGADVSKTQPEKSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTP-LRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTR 1281
            V RGG  V     + +P  ++ AF+++ FF+ G  A VA A + P PG         V K  V+ +F L GL +KL EL  AA N +LN LTQ  +L   PA+ + +  VL    +   L DG+L+  CLPTTVNMCV LTQ+++G+ AAA  NAV+GNLLGVV+TPAL+  L+ + + + P+ +   K LG KV LP+ +GQL R +  +R + E++     R  E  LLS+++  F   F    GV+G+           L+  LP++H++ L     + R  F   D R+  A  FC +HKTLAFG+PLI+ LFEG P L     P+++ HP++L +GS  AP L+ R
Sbjct:  101 VLRGGGAV-----DTAPVKRITAFVDRNFFVCGMVASVAVAGLSPGPGQA---CEKFVGKYAVATIFVLSGLGLKLSELKKAATNTKLNGLTQGANLIAFPALMLPVISVLRKTSLDGRLLDGLLVTSCLPTTVNMCVALTQASDGDVAAALTNAVIGNLLGVVVTPALVFALMQKSVQLPPASIVA-KSLGAKVALPVFVGQLLRRSQWIRSMLEKRKTLAKRAQELALLSVVWCAFSAAFGKGLGVSGS-------DLVALLVGLPLLHVMILRLCLKIGRTQF---DNREATAFAFCASHKTLAFGLPLIRTLFEGSPDLAYYCAPIMVLHPAQLFIGSLFAPGLKER 432          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S2LF02_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LF02_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.870e-59
Identity = 135/359 (37.60%), Postives = 203/359 (56.55%), Query Frame = 1
Query:  232 VTRGGADVSKTQPEKSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLP-AVGIGLSRVL---AAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGV-AGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAE 1287
            +  GG D +      S   + +AF++K FFL+G    V+ A+++P  G  G +L   L + K GV+++F L GL++KL EL  AA N +LN L Q  + G  P  VG+ L++ L   A   +   L +G+LIL CLPTT+NMC+ILT ++ GN A +  N V+ N+ G+ +TPALLL   G  +++         KL  KV+LP+A+GQ  R TP+++ + +      R  E VLL I++  FC+ F+   G+  G A          L  +LP++H+ SL       +   L +   + +A  FC +HKTLAFG+PLI  +FEG+P+L     PL+L HP +L+LGS L P  +T  E
Sbjct:   71 IRGGGGDAASP----SIVAKSRAFVSKNFFLIGMGVAVSFAKLLPELGKNGSILRPELFIGKYGVTIIFLLSGLSLKLSELTNAAANLKLNGLIQLMTFGAWPFLVGVPLTKGLELFAPSLLSKPLLEGLLILTCLPTTINMCIILTSASGGNVATSLCNTVISNMAGIFLTPALLLRFFGTTIEL--PFFELVSKLCNKVLLPVAVGQALRATPVKEFYTKHSSFFKRLQEVVLLGIVWNAFCNAFSKGLGLDLGNAIT--------LFTILPLLHIGSLMTFFTFFKSKLLNVSPGEAVAAAFCSSHKTLAFGLPLINTIFEGNPNLAAYCAPLMLIHPLQLVLGSLLVPYFKTYTE 415          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S2U717_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U717_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.410e-59
Identity = 139/365 (38.08%), Postives = 204/365 (55.89%), Query Frame = 1
Query:  223 PALVTRGGADVSKTQPE-KSPY--------DQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLP-AVGIGLSRVLA---AGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTL 1272
            P+L+   G D   + P+ K P          +L  F  K FFLLG    V +A++ P  G  GG+L   L +   GV+ +F L GL++++ EL  AA N++LNL+ Q  +    P  VG+ L+R L     G +   L DG+LIL  LPTTVNMC+ LT +A G+ A++  NAV+ NL G+ +TPALL    G+ +++     A   KL  KV+LP+ +GQL R T ++ ++    K   R  E +LLSI++  FC+ FT   G+             VL+ +LP++HL SL A   L R        R+++A MFC +HKTLAFG+PL+  +FEG+ +L     P++  HP +L+LGS L P L
Sbjct:   76 PSLLFMNGGDAGDSLPQPKKPLAIKTSDTMSKLGTFAQKNFFLLGMIVAVGSAKLFPHIGKNGGMLRPELFIGNFGVTCIFLLSGLSLEVSELKEAASNYKLNLMVQLITFLAWPFLVGVPLTRGLEFCFPGLLPKPLLDGLLILTTLPTTVNMCIFLTSAAGGSVASSLCNAVISNLFGIFLTPALLFRFFGQAIELPFG--AMVIKLCNKVLLPVTVGQLLRGTKMKDVYNNNSKKFKRLQEIILLSIVWNAFCNAFTKGMGL-------DLHHGIVLLTLLPLLHLGSLLASFGLFRTKMFNFSRREQVAAMFCASHKTLAFGLPLVNTIFEGNSNLAAYCAPIMFIHPLQLVLGSLLVPRL 431          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: B8BQS8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQS8_THAPS)

HSP 1 Score: 210 bits (534), Expect = 3.020e-57
Identity = 128/356 (35.96%), Postives = 202/356 (56.74%), Query Frame = 1
Query:  226 ALVTRGGADVSKTQPEKSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAA---GGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRT 1278
            A V+  G D S     KS  ++  AF++  FFL+G    VA   V    G  G ++   L + K GV+++F L G+++KL EL  AA N +LN L Q  + G  P  G+ ++  +       +  +L DG+LI+ CLPTT+NMC++LT ++ GN A A  N V+ N+ G+ ITPALLL   G+ +++    L   +KL  KV+LP+ +GQ+ R TP++ ++ +      R  E VLL I++  FC+ FT+  G+              L+ +LP++H+ SLA++ +   +  L     + +A  FCG HKTLAFG+PLI  +FEG+P+L     P++  HP +L++GS L P  ++
Sbjct:   65 AAVSLRGGDRSY----KSIVERANAFVSNNFFLIGMVVAVAGEAVRGVDGKNGSIVRPELFIGKYGVTVIFLLSGISLKLEELTKAASNVKLNGLIQTMTFGAFPLAGLAITTTIERFLPSLLPKSLLDGLLIMTCLPTTINMCILLTSASGGNVATALCNTVISNMAGIFITPALLLQFFGKSIEL--PFLDLVRKLVNKVLLPVGIGQVLRMTPVKDVYAKYTIFFKRLQEIVLLGIVWNAFCNVFTSGLGLE-------VKHAAALLTMLPLLHVGSLASMFSFFSLKELNFSPSEVVAATFCGAHKTLAFGLPLINTIFEGNPNLAAYCAPIMFMHPLQLVIGSLLVPYFKS 407          
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Match: A0A7S3PZ27_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ27_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.620e-56
Identity = 128/339 (37.76%), Postives = 197/339 (58.11%), Query Frame = 1
Query:  289 QLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLS--LSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLP-AVGIGLS---RVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLLLGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISRFSECVLLSIIYTTFCDTFTNSAGVAGTAXXXXXXXXXVLMAVLPVVHLLSLAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLGMLATPLLLYHPSELMLGSALAPTLRTRAE 1287
            +++AF  K  FLLG A  V  A++ PS G  GG++   L + K GV+++F L G++++L EL  A  N +LN + QA S    P  VG+ L+   + L    +  AL +G+LIL CLPTTVNMCV+LT +A GN AA+  NAV+GN++G+ +TPALL+   G  +++    L    KL  KV++P+A+GQ+ R TP +       KA     E +L+ +++  FC+ FT   G+  +           L+ +L  +HL S A L  L +   +     D IA  +C +HKTLAFG+PL+  +FEG+P+L     P++  HP +L+LGS +A  ++  +E
Sbjct:   90 KIRAFTQKNSFLLGMATAVMFAKLFPSLGVNGGVMKPELFIGKFGVTMIFLLSGVSLELSELKSAVANIKLNGMVQAGSFLAWPFLVGVPLTTALKKLLPNFLPKALMEGILILTCLPTTVNMCVLLTGAAGGNVAASLANAVMGNMMGIFVTPALLMYFFGTAIEL--PFLNMVLKLCNKVLVPVAVGQVLRATPAKHFFVNNKKAFKSLQEFILIGLVWNAFCNAFTKGLGIEFSHGLF-------LLGLLSSLHLGSFAVLYKLFKSKLVNFSNADAIAATYCTSHKTLAFGLPLLNTIFEGNPNLAAYCAPVMFIHPLQLLLGSLIASKIKEESE 419          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKI1_ECTSI1.990e-25798.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SW23_9STRA1.000e-7246.08Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A835Z827_9STRA6.320e-6846.04Putative sodium bile acid cotransporter n=1 Tax=Tr... [more]
A0A7S2MPW2_9STRA1.800e-6745.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0NFI1_9EUKA8.230e-6644.04Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J2SZL0_9STRA3.940e-6039.89Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2LF02_9STRA1.870e-5937.60Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S2U717_9STRA5.410e-5938.08Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8BQS8_THAPS3.020e-5735.96Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3PZ27_9STRA2.620e-5637.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:79759..84828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score726.5
Seed ortholog evalue7.7e-207
Seed eggNOG ortholog2880.D7FKI1
Model size2190
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-12_001980.1
Cds size1341
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.691.1prot_Ecto-sp6_S_contig100.691.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 80608..84828 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348720.7210839-UTR-Ecto-sp6_S_contig100:79758..806071682348720.7210839-UTR-Ecto-sp6_S_contig100:79758..80607Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 79759..80607 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348720.7299235-CDS-Ecto-sp6_S_contig100:80607..807781682348720.7299235-CDS-Ecto-sp6_S_contig100:80607..80778Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 80608..80778 -
1682348720.737449-CDS-Ecto-sp6_S_contig100:82126..822041682348720.737449-CDS-Ecto-sp6_S_contig100:82126..82204Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 82127..82204 -
1682348720.7478063-CDS-Ecto-sp6_S_contig100:82473..825981682348720.7478063-CDS-Ecto-sp6_S_contig100:82473..82598Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 82474..82598 -
1682348720.7548954-CDS-Ecto-sp6_S_contig100:82945..830991682348720.7548954-CDS-Ecto-sp6_S_contig100:82945..83099Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 82946..83099 -
1682348720.762-CDS-Ecto-sp6_S_contig100:83329..834751682348720.762-CDS-Ecto-sp6_S_contig100:83329..83475Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 83330..83475 -
1682348720.7784681-CDS-Ecto-sp6_S_contig100:83808..840601682348720.7784681-CDS-Ecto-sp6_S_contig100:83808..84060Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 83809..84060 -
1682348720.7946439-CDS-Ecto-sp6_S_contig100:84413..848281682348720.7946439-CDS-Ecto-sp6_S_contig100:84413..84828Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 84414..84828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.691.1

>prot_Ecto-sp6_S_contig100.691.1 ID=prot_Ecto-sp6_S_contig100.691.1|Name=mRNA_Ecto-sp6_S_contig100.691.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=447bp
MRVVSSLSCFAAASPLLRSQLPFTTTATSSNDVQQLGNTHLGRPSMHVQR
PKQQSHPGQNNNWLRLGSGCNKYNPALVTRGGADVSKTQPEKSPYDQLKA
FLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLA
IKLGELAGAALNFRLNLLTQAFSLGVLPAVGIGLSRVLAAGGMHPALADG
VLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVITPALLLLL
LGRRLDMAPSLLATFKKLGIKVVLPLALGQLARFTPLRKLHERKPKAISR
FSECVLLSIIYTTFCDTFTNSAGVAGTAAGGGGGGVLVLMAVLPVVHLLS
LAALDALSRVPFLKIDERDRIAVMFCGTHKTLAFGIPLIKALFEGHPSLG
MLATPLLLYHPSELMLGSALAPTLRTRAEAREAAAGAAQNPPNGGN*
back to top

mRNA from alignment at Ecto-sp6_S_contig100:79759..84828-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.691.1 ID=mRNA_Ecto-sp6_S_contig100.691.1|Name=mRNA_Ecto-sp6_S_contig100.691.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5070bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:79759..84828- (Ectocarpus species6 EcLAC_371)
ATGCGTGTTGTGTCTTCTCTTTCTTGCTTCGCTGCTGCGAGCCCTCTCTT GCGTTCACAGCTCCCCTTCACGACAACGGCAACATCAAGCAATGACGTAC AGCAGCTCGGCAACACACATCTTGGTCGCCCATCCATGCATGTCCAGCGT CCAAAGCAGCAGAGCCATCCCGGGCAGAACAACAACTGGCTCAGGCTGGG TAGTGGCTGCAACAAGTACAACCCCGCTCTTGTGACAAGAGGCGGTGCTG ATGTGTCCAAGACCCAGCCTGAAAAGAGTCCGTATGACCAGCTGAAGGCT TTCCTCAACAAACGGTTCTTTCTGCTAGGGGCGGCGGCGATGGTTGCCGC GGCGAGGGTTGTACCTTCTCCCGGGACCACGGGAGGCTTGTTGTCGCTTT CGGTGTCTAAAGCTGGTGAGGGAGGGTTGGTCAGTCTGGGTAGGGCCGAT TTCTTCAGTTGCTATTGAGAGCGAATGACAACGAGTACGTAATCGTTGCC ACGAGGACCAACACAGGTACGATACGTGTGTTGTGCAATAGACGGAGTCG CCAGAGGGAACCATGTCTGCGCGGAGCGAAACTGTGATTAACGTCGACAA AGAAACTCCAATCGACCTCTATCTTCAATTGCGTGACGGAGAACTGGAAA TGACACCGTGTATAAATATAATTCGACGTCGTAGCGTAGTGAAACCTGAC CTCGCATTCCTACGTGACATGACTGCTATTCGTATGCTCCGCTGCGCCCT GCACCTCAAAACTTGCAGGAGTGTCGTTGGTCTTCTTCTTGGTTGGTCTC GCCATCAAGCTGGGCGAGCTTGCGGGAGCCGCCCTAAACTTCAGGCTGAA CTTGCTGACCCAGGCCTTCTCGTTGGGTGTGCTCCCCGCGGTGGGCATAG GGCTCTCGCGTGTCCTCGCCGCAGGCGGGATGCATCCAGCGCTCGCAGAT GGCGTGCTGATTTTGATGTGCCTTCCCACGACTGTCAACATGTGCGTCAT TTTGACGCAGAGCGCTGAAGGTGCGTGTGTATGTGTGAATCAGCTGCAAG AACGCGTCCAGTCGTTGGGTACGTCAGACATGCCGCATCGTGTCCGCTTT CGTATCAATCCTGTGCTCCGCGCCGTTGGGCGTGAGTCCTCCTCGCCTGT TGACTCTGGCCGAGGTAGAGCGAAAACCTTTGAAGGTGCACCTTTAGGCC TAGGAGGCAGCCTCCGTGTTGGGCAGAGAAAGCCTCCCTATCACACAGGG TTCCACCGCGATAGAATGATTCGGAATTCGAGTCGGTTGCCGGGCTCGTA GCTGCGTGATACGTTTCGGCGTTGTTCTGCAAATGGACCCGAATCTCGTG CAGGCAACACAGCGGCAGCGGCCTTCAACGCGGTGCTCGGCAACTTGTTG GGGGTCGTAATCACCCCTGCTCTCCTGCTTTTGCTCCTTGGTCGTCGCTT GGACATGGCTCCATCTCTGTTGGCTACGTTCAAAAAGCTAGGAATAAAGG TGCGCGCCAGTCATGTTGGGGATGCGGTGTAGCGCTGCTGTCAGTATTCT TCAGCCGGGTATCCGTCGCCGCATATCTACACCAAGGTTGCAACGAACGT ACACAGCCGGTCTTTGTTCGTGGTCCGAAATCTACAGCACTGTCCGCTAG AAACGACAGTCAGCTCCCCCCCCCCGCATCCTTCACGCTTTACGTTCATG ACAACCCACCCGATCGACTCGTGGAAAAGGTGGTGCTACCGCTGGCGCTT GGCCAGCTCGCTCGTTTCACGCCCTTGCGGAAGCTGCACGAGCGCAAGCC CAAGGCTATATCGCGCTTTTCCGAGTGCGTCCTCCTGAGCATCATCTACA CCACGTTCTGCGACACTTTCACAAACAGCGCGGGTGAGTGGCGACGCATG CGGCTGTTTTTGTTGATGGCCAGCCGTTTGGCTCGTGTTGCTTGTCGCGT CGTTTTGGGTCATGACTTCGGATGATCGTGTGATGCACACTTGATGGCAT GTGTGTCGACACTCTCCGATTGCGACTCACCCCCGAGGGCACACACCTAT CGACGACGGGAAATAAACAAAAATCACCCATTAGAACGATTGCATTCATA GCAAACCTCCTACAGCAGCCCAACGACTCGCGTCACAAATTACCTCAAGG TTCCTAACACACCATCGACATCATGTCCGCTCGCTCGCTTGTCTCCTCTT CACCTCCGCGATATCCGATGTTGTATGCAGGCGTTGCGGGAACCGCCGCT GGCGGTGGAGGGGGCGGGGTTCTGGTACTGATGGCGGTGTTACCCGTCGT TCACCTGTTGAGCCTCGCGGCTTTGGACGCACTCTCGCGTGTACCGTTTC TGAAGGTGCGTGCTGTGATCTTTCTTGCCCCGTGCAAGGCTTTTGCGGCA TGATGCCCGCTGCCTGACATTAGTCGCGCTTGTCAGGCTGGGCGGAAGTA TCGGACATACCGACTACTGTCGAGGTGCCCTCTTGCACCGCAGGAGTTTC TGCAGGCAACGATGGTGTGCCGAGCGTGGTGTATTCGTTGAGCCATGTCT CGATTACGCTCTTGCACGGTTTTAATCTTGCGATGCATCGTTGCACGTGC TTTCCGACCTCGGTTCTATCGCAGATTGACGAAAGAGATCGCATTGCGGT AATGTTCTGCGGCACGCACAAGACTCTCGCATTCGGCATTCCGTTGATAA AGGTACGAACAGCACCTAGGTGGGGGGCAGCTGTCTACAACAATGGTTTG GTGGTACTGGTGCGCTATAAATATTTAATGCGTTCAGACCCCATCCGTAC AACATGCTTAGGGGTTTTCCTGAGCTTTCCTGATCATGATGACGTTTGAT ACTGGCCGAAGTATGTTCCATCCGTGTTCCAACCTTCACCGAAGTAGCAG TCTGACTGGAGATGTTGTTGTAGTTGTCTACACCTTAAAAACCATTCCGG TTTCTCTATCCGGTACCTTCATCTGTCCGTACAAATCTAGCACTTGACGG GGGCGATTCCCGTGGTCACAGGCTATCTTACCCTTGACAGGTGTACTAAA ATGCAATGGACGAAAATGTAATGGATCCGAAGGGTCCGCAAGCCACTACA AATCAACGATAGAAAGTCTAGAGCCCTCTCCTCGCCTCTACACTCTCTGC GAGGTAAGCTTGAGACTGGAAGTCAAGTCACGAGCCAGAGAGGTAGGTAT TTTCCCTGGTTCAATCTTGGTACTTCGCAGAAAAAAGAGAGAAGGCCATC TGGAGAGGAAAAACAAAGGAAAAGAAAAAGAAAAAGAGAAAGACACAAAC CAGAACCCCTACTGTAACGAACAAACAAACAGAAACGAGGGCCACCAGAG ATAGCAAAGGCACGTTCACCATTCGTGGGGGGTTGGTGCAATGGTGCAGA GATGGGGGGGGGGGGAGATTAGTCAAGGGTTCAATCCGACACATTTCGCG CCCCTCGGTTCGCCGCTTGTGGTTTGCTTGCTTCCCTCGCCGTCTCGTCC GTCGGCTGCCCCCCTCCCGCCTCATTGGTTGTAGCCATGCCTGTGCTGTT GCTGGGCTTGTTGTTTCGTTTGAGCGCTCGTTGTCGGCTGGCCTCTCCTT CATCTTTGTGCCAGGAGGTCATGAATCTTAGCTCCTTGCAGTACCACCGT ATGCCGGACCGCCTTGGAGAGAAGTAAGCTTGTGAGGAAACAGAGCAGGG AGGGGATACGCAGACCCTATCCCTAACCCTAGCCCTAACTCTAGCCCTAA CCCAACTTGCCCGATTGCATGCTTTGTCCAACATGTTTACTTAATCGAAA AACCCTGCGAAGACTACTGCGTATGCTACGGTACACCTCGCTCCACCCTC GCTGCTTCCGTCCGAGTTACTCGCGGGACTCCGAAAACACATGGCTCGGT GTCCGTAGATCCGTGCTTTGCCTCGAACATCTTGAAGTCGTCATTCAGGC ACATCTGAAGATACACATGATTTACAAACGTGGCCTGTCCTGGTAGCTGA CAATTGGCCTCCCTGCAACTTGTGATGAACTCGGTCTTGCCCGACGTTAG GCGTTGTTCGAAGGGCACCCGTCTTTGGGCATGCTGGCGACGCCTCTTCT GCTGTACCATCCCTCAGAGCTGATGCTCGGCAGTGCTCTCGCGCCAACGC TGAGAACAAGAGCAGAGGCTAGGGAGGCAGCGGCTGGTGCCGCACAAAAC CCTCCAAATGGAGGGAACTGATAGCTTCATAGTTTGGATCAAAGGTCAAT TTCGACGGAAGTTTTTTGTTGAGTATAGGAGCAAATCGATTGTTCTACGC AAGATGGTGCAACAGGTTCTTGCATTTCAGCGCTCGTGTCTTTTGCCGTG TAGGTTTGTGTGGTGGGCGTGTTGATCCATGCGCTGTGTGTACAGCCACC TTTCTGGTTCGTAAAACTAGAGCGCCAAGCTGACACGAATGCACCGTCGG CTTTATCGTGGTGCGTGTAGGCGACAGACCTTTGTAAGGAATGCTTGACC ATGCAGCAGTCTTCACATGTACAGGGACTAGTCTAGAGCTCTGTCGTGAG AGGCCACGAAGAGGTCTTGGGGAGGGGGGAATTCGATTTACTTAGCGCCA TGCCACGTGCTTCGCAAACGAGTTTCGACAAACCAAACGTCGGCGTACTT TGGGCGCAGACTGTGACGCAGCGTAGAAAATGGGGAGGTTGTAGAACAAG GGAAGCTCAAAAGGGAGAGGGTATGGGTATGGGCTTGTCGCCTGTTGCGG GGCATGGCCAAATTCAGTTCTGGAGTTGACACCATTTTCTGCTGACCGAA CAGTTCGAGATCACGACCATGTTCGTTCGCGTATCTCATGCCCGATCTAC TGATTCACTCCGGAACGCAAGTGCTTTGTTTGAGTTTCCAACAGAGAAAA GGCGAGAGATGGTGCGAGCGGAGACACGGCCGCGTGCGCGTAGCTTTCGT GAGCTCCGATAAATCAGGAGGGGTCAAGAAAACGGCTGAAAATAACGGTG AAGAAAACGGAGCCAACATTCCCCGCAACAGAAACCAACCCTTTTCAGGA TACAACTGCATCAACTTGGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:79759..84828-

>mRNA_Ecto-sp6_S_contig100.691.1 ID=mRNA_Ecto-sp6_S_contig100.691.1|Name=mRNA_Ecto-sp6_S_contig100.691.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1341bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:79759..84828- (Ectocarpus species6 EcLAC_371)
ATGCGTGTTGTGTCTTCTCTTTCTTGCTTCGCTGCTGCGAGCCCTCTCTT
GCGTTCACAGCTCCCCTTCACGACAACGGCAACATCAAGCAATGACGTAC
AGCAGCTCGGCAACACACATCTTGGTCGCCCATCCATGCATGTCCAGCGT
CCAAAGCAGCAGAGCCATCCCGGGCAGAACAACAACTGGCTCAGGCTGGG
TAGTGGCTGCAACAAGTACAACCCCGCTCTTGTGACAAGAGGCGGTGCTG
ATGTGTCCAAGACCCAGCCTGAAAAGAGTCCGTATGACCAGCTGAAGGCT
TTCCTCAACAAACGGTTCTTTCTGCTAGGGGCGGCGGCGATGGTTGCCGC
GGCGAGGGTTGTACCTTCTCCCGGGACCACGGGAGGCTTGTTGTCGCTTT
CGGTGTCTAAAGCTGGAGTGTCGTTGGTCTTCTTCTTGGTTGGTCTCGCC
ATCAAGCTGGGCGAGCTTGCGGGAGCCGCCCTAAACTTCAGGCTGAACTT
GCTGACCCAGGCCTTCTCGTTGGGTGTGCTCCCCGCGGTGGGCATAGGGC
TCTCGCGTGTCCTCGCCGCAGGCGGGATGCATCCAGCGCTCGCAGATGGC
GTGCTGATTTTGATGTGCCTTCCCACGACTGTCAACATGTGCGTCATTTT
GACGCAGAGCGCTGAAGGCAACACAGCGGCAGCGGCCTTCAACGCGGTGC
TCGGCAACTTGTTGGGGGTCGTAATCACCCCTGCTCTCCTGCTTTTGCTC
CTTGGTCGTCGCTTGGACATGGCTCCATCTCTGTTGGCTACGTTCAAAAA
GCTAGGAATAAAGGTGGTGCTACCGCTGGCGCTTGGCCAGCTCGCTCGTT
TCACGCCCTTGCGGAAGCTGCACGAGCGCAAGCCCAAGGCTATATCGCGC
TTTTCCGAGTGCGTCCTCCTGAGCATCATCTACACCACGTTCTGCGACAC
TTTCACAAACAGCGCGGGCGTTGCGGGAACCGCCGCTGGCGGTGGAGGGG
GCGGGGTTCTGGTACTGATGGCGGTGTTACCCGTCGTTCACCTGTTGAGC
CTCGCGGCTTTGGACGCACTCTCGCGTGTACCGTTTCTGAAGATTGACGA
AAGAGATCGCATTGCGGTAATGTTCTGCGGCACGCACAAGACTCTCGCAT
TCGGCATTCCGTTGATAAAGGCGTTGTTCGAAGGGCACCCGTCTTTGGGC
ATGCTGGCGACGCCTCTTCTGCTGTACCATCCCTCAGAGCTGATGCTCGG
CAGTGCTCTCGCGCCAACGCTGAGAACAAGAGCAGAGGCTAGGGAGGCAG
CGGCTGGTGCCGCACAAAACCCTCCAAATGGAGGGAACTGA
back to top