mRNA_Ecto-sp6_S_contig10.633.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.633.1
Unique NamemRNA_Ecto-sp6_S_contig10.633.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A6H5K6H3_9PHAE (FAA_hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H3_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 2.680e-141
Identity = 207/216 (95.83%), Postives = 210/216 (97.22%), Query Frame = 2
Query:  236 EHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTTH 883
            EHALEMGGNPDK+PPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGR IP RDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALT TPPAKGGG+GAAAGL GDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTP GVAPLAVGDDVEA VEGLEPCRFRVGP+LPPTTH
Sbjct:   72 EHALEMGGNPDKEPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRCIPPRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTTTPPAKGGGVGAAAGLVGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPKGVAPLAVGDDVEAGVEGLEPCRFRVGPVLPPTTH 287          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: D7FPA3_ECTSI (Fumarylacetoacetate (FAA) hydrolase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPA3_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 7.110e-102
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 2
Query:  404 GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTTH 883
            GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPT PAK GG+GAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPT H
Sbjct:   10 GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTLPAKDGGVGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTIH 169          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: B6IQ60_RHOCS (Fumarylacetoacetate (FAA) hydrolase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IQ60_RHOCS)

HSP 1 Score: 256 bits (655), Expect = 5.770e-79
Identity = 132/234 (56.41%), Postives = 161/234 (68.80%), Query Frame = 2
Query:  161 PSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGP 862
            P+LA+VG  ++FPVRR+YCVG NY  HA EMGG+PD++PPFFF KP DA V   A GA V YPP T+DLQHEVE+VVA+G+GGR IP  +A   VFA  VG+DLTRRD+Q AA+KAG+PWD +K FD S P+G L P  P            AG     RIWL V G RRQ + L +M WSV E+IA LS LF L  GD++FTGTPSGV  L  GD ++A ++GLEP   R+ P
Sbjct:   16 PTLAIVGRPERFPVRRIYCVGRNYAAHAREMGGDPDREPPFFFQKPADAVV---ADGADVPYPPRTDDLQHEVELVVALGRGGRNIPVAEAGALVFAQAVGIDLTRRDLQAAARKAGKPWDTAKAFDHSAPVGILHPVGP------------AGPLTRGRIWLAVNGDRRQQADLADMTWSVAEVIAELSTLFDLAPGDLIFTGTPSGVGSLLPGDRIDAGIDGLEPLVTRIVP 234          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A2U8GRV2_9RHOO (5-carboxymethyl-2-hydroxymuconate isomerase n=4 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2U8GRV2_9RHOO)

HSP 1 Score: 251 bits (642), Expect = 4.860e-77
Identity = 127/235 (54.04%), Postives = 162/235 (68.94%), Query Frame = 2
Query:  155 AAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
            A PS+AV GS ++FPVRRVYCVG NY +HA EMG +PD++PPFFFTK PD+ +   A+G+V  YP E+ D+ HE+E+VVAIG+GGR I   DAL+HVF YGVG+D+TRRD+Q AAKKAGRPW+  K FD++ P   +    PA G G  AA           IWL+V G RRQ   L   +WSVPE+IA LS  F LEAGD+++TGTP+GV P+ VGD +E  + G+      VG
Sbjct:   14 AVPSVAVSGSAKRFPVRRVYCVGRNYADHAREMGHDPDREPPFFFTKHPDSLI---ASGSVFPYPSESNDVHHEIELVVAIGRGGRNIAAEDALEHVFGYGVGLDMTRRDLQGAAKKAGRPWEIGKAFDAAAPCSEIV---PASGSGHPAAG---------EIWLDVNGERRQQGDLSSQIWSVPEVIAHLSRYFALEAGDLIYTGTPAGVGPVKVGDRLEGGIAGVGSIAVTVG 233          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A6N7DA73_9BURK (Fumarylpyruvate hydrolase n=1 Tax=Xylophilus sp. TaxID=2653893 RepID=A0A6N7DA73_9BURK)

HSP 1 Score: 249 bits (635), Expect = 4.870e-76
Identity = 128/245 (52.24%), Postives = 161/245 (65.71%), Query Frame = 2
Query:  137 YAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTP----PAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
            YA+   A  SLA+ G  ++FP+RRV+CVG NY EHA EMG +PD++PPFFF+KP DA V    A   V YPP T DL HE+E++VAIGKGG  IP   AL+HV+ YGVGVDLTRRD+Q AAKK GRPWD +KGFD+SGP   L P      P+KG                RIWL V G  RQ   LG+++W V ++IA LS+   LE GD++FTGTP+GV P+  GD++   VEG+    FR+G
Sbjct:    5 YAIAPPAVASLAIQGQPERFPLRRVFCVGRNYAEHAREMGHDPDREPPFFFSKPADAVV---PAEGTVPYPPLTSDLHHEIELLVAIGKGGADIPAAQALEHVWGYGVGVDLTRRDLQAAAKKQGRPWDGAKGFDASGPSAPLVPASKIGHPSKG----------------RIWLSVNGQERQAGDLGDLIWPVADVIAYLSQSVRLEPGDLIFTGTPAGVGPVQPGDEIHGGVEGVAELHFRLG 230          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A0S1Y7W2_9BORD (Fumarylacetoacetate hydrolase n=5 Tax=Alcaligenaceae TaxID=506 RepID=A0A0S1Y7W2_9BORD)

HSP 1 Score: 246 bits (627), Expect = 7.830e-75
Identity = 126/246 (51.22%), Postives = 158/246 (64.23%), Query Frame = 2
Query:  137 YAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTP----PAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGP 862
            Y +      SLAV GSD++FPVRRVYCVG NY EHA EMG +PD+DPPFFF+KP DA V    A   + YPP+TED  +E+E++VAIGKGG+ IP   AL HV+ Y VG+DLTRRD+Q  AKK GRPW+ +KGFD SGP   L P      P+KG                RIWL V G  RQ   L E++WSVPE+I+ +SE   L+ GD++FTGTP+GV  +  GD V   V+G+     +VGP
Sbjct:    4 YVITPAEQASLAVAGSDKRFPVRRVYCVGRNYAEHAREMGHDPDRDPPFFFSKPADAIV---PAEGTIQYPPQTEDFHYEIELIVAIGKGGKNIPVDQALDHVWGYSVGIDLTRRDLQATAKKMGRPWEWAKGFDVSGPSTPLKPASEVGHPSKG----------------RIWLGVNGDVRQQGDLSELIWSVPEVISYISESMALQPGDLIFTGTPAGVGAIRPGDVVTGGVDGIGSFEMKVGP 230          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: UPI00105EA182 (fumarylacetoacetate hydrolase family protein n=1 Tax=Paraburkholderia flava TaxID=2547393 RepID=UPI00105EA182)

HSP 1 Score: 246 bits (627), Expect = 7.830e-75
Identity = 124/243 (51.03%), Postives = 160/243 (65.84%), Query Frame = 2
Query:  131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
            +Q+A+P  A  S+A+ GSD++FPVRRV+CVG NY +HALEMGGNPD++PPFFF KP DA V    A   + YPP T DL HE+EMV+AIGK G  +   DAL  V+ YG+GVDLTRRD+Q  AKK GRPWD  KGFD+S P+   TP  P             G  G  RIWL V G  RQ   L +++W V ++I  +SE  TL+ GD++F+GTP+GVA L  GD V+  +EG+    F++G
Sbjct:    2 VQFAIPAPAVTSVAIAGSDERFPVRRVFCVGRNYADHALEMGGNPDREPPFFFQKPTDAVV---PAAGTIPYPPLTRDLHHEIEMVIAIGKEGTNVAAGDALDLVWGYGLGVDLTRRDLQGEAKKTGRPWDWGKGFDASAPV---TPLHPVS---------AVGHLGAGRIWLSVNGTLRQQGDLNQLIWPVADIIRYVSESVTLKPGDLIFSGTPAGVAALQPGDTVQGGLEGIGEFEFKIG 229          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A8J3DWL2_9RHOB (Fumarylpyruvate hydrolase n=1 Tax=Agaricicola taiwanensis TaxID=591372 RepID=A0A8J3DWL2_9RHOB)

HSP 1 Score: 244 bits (623), Expect = 2.450e-74
Identity = 126/228 (55.26%), Postives = 155/228 (67.98%), Query Frame = 2
Query:  158 APS-LAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLE 838
            APS + V G+DQ FPVRR+YCVG NY +HA EMGG+PD++PPFFFTKP DA V    +G+ V YPP+T++L HE+E+VVAIGK G  IP   AL+HV+ Y VG+DLTRRD+Q  AKKAGRPWD +KGFD S P+ AL P            A   G     RIWL+V  G RQDS L + +W+VPE IA LS L  LE GD+L TGTP GV  +  GD V   ++GL+
Sbjct:    8 APSVMPVAGTDQTFPVRRIYCVGQNYADHAREMGGDPDRNPPFFFTKPADAIV---PSGSAVPYPPQTDNLHHEIELVVAIGKAGADIPVDRALEHVYGYTVGIDLTRRDLQAEAKKAGRPWDMAKGFDKSAPMAALHP------------AEKIGHPSSGRIWLKVNDGIRQDSDLAKQIWAVPEAIAYLSTLVRLEPGDLLMTGTPDGVGAIVRGDRVSGGIDGLD 220          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A2E7FBA2_9PROT (Fumarylacetoacetate hydrolase n=2 Tax=unclassified Rhodospirillaceae TaxID=41296 RepID=A0A2E7FBA2_9PROT)

HSP 1 Score: 244 bits (623), Expect = 2.800e-74
Identity = 121/236 (51.27%), Postives = 157/236 (66.53%), Query Frame = 2
Query:  131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLE 838
            ++YA+P     S+A+ GSD +FPVRR+YCVG NYR HA+EMG +PD+DPPFFF KP DA V+    GA + YPP+TE+L HE+E+V AIG GG  I   DAL HV+ YGVG+DLTRRD+Q  AK+ GRPWD  KGFD S P  AL P          +  G    E  R IW++V G  RQ+S L   +WS  E I+ LS L TL+AGD+++ GTP GVA +  GD +E  ++G++
Sbjct:    1 MKYAIPPFEQVSIAIEGSDDRFPVRRIYCVGRNYRAHAIEMGADPDRDPPFFFMKPADAIVE---NGATIPYPPQTENLHHEIELVAAIGAGGADISVADALNHVWGYGVGIDLTRRDIQNKAKEMGRPWDMGKGFDQSAPCTALHPV---------SEVGHPDTEESRSIWIKVNGKIRQESTLDHHIWSTAETISYLSGLVTLQAGDLIYMGTPDGVAAVMSGDKMEGHIDGVD 224          
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A1B1ANA1_9PROT (Fumarylacetoacetate hydrolase n=2 Tax=Candidatus Viadribacter manganicus TaxID=1759059 RepID=A0A1B1ANA1_9PROT)

HSP 1 Score: 243 bits (620), Expect = 7.330e-74
Identity = 121/242 (50.00%), Postives = 157/242 (64.88%), Query Frame = 2
Query:  131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRV 856
            +Q+       PS+A+ GSD +FPVRR++CVG NY +H  EMG +P  +PP FF+KP DA V+   +G  + YP  T +  HEVE+V+AIG GG  I   DA+ +V+ YGVGVDLTRRD Q  AKKAG PWD +KGFD S PI ALTP                GD    RIW++V G  RQD+   +M+WS+PE+IA LS+ + L  GD++FTG+PSGVAPL  GD +E  V+GL P RF +
Sbjct:    1 MQFTFAAPPQPSVAIAGSDVRFPVRRIFCVGRNYADHVREMGNDPKSEPPLFFSKPADAVVE---SGNAIPYPSHTSNFHHEVELVIAIGAGGSNIVVADAINYVWGYGVGVDLTRRDRQAEAKKAGAPWDTAKGFDRSAPISALTPIAS------------CGDVTNARIWIKVNGETRQDANTHDMIWSIPEIIAALSQWWDLRPGDLIFTGSPSGVAPLNPGDTIECGVDGLAPLRFSI 227          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6H3_9PHAE2.680e-14195.83FAA_hydrolase domain-containing protein n=1 Tax=Ec... [more]
D7FPA3_ECTSI7.110e-10297.50Fumarylacetoacetate (FAA) hydrolase, putative n=1 ... [more]
B6IQ60_RHOCS5.770e-7956.41Fumarylacetoacetate (FAA) hydrolase, putative n=1 ... [more]
A0A2U8GRV2_9RHOO4.860e-7754.045-carboxymethyl-2-hydroxymuconate isomerase n=4 Ta... [more]
A0A6N7DA73_9BURK4.870e-7652.24Fumarylpyruvate hydrolase n=1 Tax=Xylophilus sp. T... [more]
A0A0S1Y7W2_9BORD7.830e-7551.22Fumarylacetoacetate hydrolase n=5 Tax=Alcaligenace... [more]
UPI00105EA1827.830e-7551.03fumarylacetoacetate hydrolase family protein n=1 T... [more]
A0A8J3DWL2_9RHOB2.450e-7455.26Fumarylpyruvate hydrolase n=1 Tax=Agaricicola taiw... [more]
A0A2E7FBA2_9PROT2.800e-7451.27Fumarylacetoacetate hydrolase n=2 Tax=unclassified... [more]
A0A1B1ANA1_9PROT7.330e-7450.00Fumarylacetoacetate hydrolase n=2 Tax=Candidatus V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2195910..2200607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score315.1
Seed ortholog evalue2.6e-83
Seed eggNOG ortholog2880.D7FPA3
Model size1613
KEGG rclassRC00326,RC00446
KEGG koko:K01557
KEGG ReactionR01085
KEGG Pathwayko00350,ko01100,ko01120,map00350,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.acylpyruvate hydrolase activity
EggNOG OGsCOG0179@1,KOG1535@2759
Ec32 ortholog descriptionFumarylacetoacetase, C-terminal-related
Ec32 orthologEc-15_004170.1
EC3.7.1.5
Cds size654
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.633.1prot_Ecto-sp6_S_contig10.633.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 2196619..2199251 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348714.737309-UTR-Ecto-sp6_S_contig10:2195909..21966181682348714.737309-UTR-Ecto-sp6_S_contig10:2195909..2196618Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 2195910..2196618 -
1682348714.7785082-UTR-Ecto-sp6_S_contig10:2199251..21992671682348714.7785082-UTR-Ecto-sp6_S_contig10:2199251..2199267Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 2199252..2199267 -
1682348714.7859807-UTR-Ecto-sp6_S_contig10:2200373..22006071682348714.7859807-UTR-Ecto-sp6_S_contig10:2200373..2200607Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 2200374..2200607 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348714.7490816-CDS-Ecto-sp6_S_contig10:2196618..21967891682348714.7490816-CDS-Ecto-sp6_S_contig10:2196618..2196789Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2196619..2196789 -
1682348714.7565165-CDS-Ecto-sp6_S_contig10:2197387..21975881682348714.7565165-CDS-Ecto-sp6_S_contig10:2197387..2197588Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2197388..2197588 -
1682348714.7638533-CDS-Ecto-sp6_S_contig10:2198115..21982431682348714.7638533-CDS-Ecto-sp6_S_contig10:2198115..2198243Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2198116..2198243 -
1682348714.7711043-CDS-Ecto-sp6_S_contig10:2199097..21992511682348714.7711043-CDS-Ecto-sp6_S_contig10:2199097..2199251Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2199098..2199251 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.633.1

>prot_Ecto-sp6_S_contig10.633.1 ID=prot_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=218bp
MGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIG
KGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSG
PIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVW
SVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRF
RVGPLLPPTTHLLASEV*
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mRNA from alignment at Ecto-sp6_S_contig10:2195910..2200607-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.633.1 ID=mRNA_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4698bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2195910..2200607- (Ectocarpus species6 EcLAC_371)
TGGTTGCCATAGGTCCCTGCGCTATGCAACGGCAAAGCGCGCTGCCACGG TCATTTGCGGGACGCTACCGCCACCACCAACAGCGGTGCAGCTGCACTGC AGCAGACATGCGAGTGGTAGTGCGGGGGATCTCCAGTACGCCGTGCCCAG GGTTGCTGCGCCGAGCCTAGCCGTGGTTGGCTCCGACCAGAAGTTCCCCG TCAGGCGTGTGTACTGCGTGGGCAGCAACTACAGGCGAGTCAGCGACTAC AGAGTGCGCTCGAAGTTGGTTGTTGTTCAGTGGCACGAGCCAACGTGGGC CAGATCTTCGCACGAAGAAGAGCGAGTTGCACCGCAATAGCCAGTGCACG CCCGCTCCTCCCTTCCCCGAGTCGATTTCCGCGTCCAGCTCAGTCCACAG AGGGGCGAGTTCGACGTCTCGCCATCTAGAAAGTGCCCGAGCGGAAGAGC TGGTAGGTTTGTTGAAAGGTTTATTGTTGTCCCAACACCCAACACCCTCG GCGGAGCTCAACACATGTTCAACCTACGCTTACAGAGGAGCAGAGGGTAC TGCTTTGTAGGAACAACGTTGAACTGCCAACACCAACTTCAGCCGATTCT AATACTTATCCAGCAGTTTGCTTACTTACCAACTTACCAAAAACTGCGAA GACTTCTGGGGATGAAGACATATGTACCCCGCTGTGCGTTCCCCCCAAGG GCGGGCCTCTTGTAACCCTCCCCCCCCCGATGTTTGCCATCGGGGTTGGG TTTTCGTCGCCTGGCAACGACGTTGTAAAACATGCCGCCCCCCCCGGTGT TTGGCATCGGGGTTGGGTTTTCGTCGCTTGGCAGCGATGTTGCAAAACAA GCCGATCATTTGGTGAGCTCGGCAACCAGGTTACCGCTTTTTTTTCACCT CTGGTTATTTTTTTGGGCGGTAACCATGAATGGTGGTCGAGTAGATCATG TTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAAGGGGATGATCGCACCA TGTTGTGTTAAAATTGTCAAGCATCCTCGAGGCAGTTACATAGTGCTTAT AACTGTCTCTGGAAGTGAAACCACCAGAAAATAAATTAAGTTATACGCAG CTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGTCGAACACCCTTAGC AGGATGCAGCTAACACCTCATGCGACTCGCCGAATACCTCACGGTGCTTG GTGATGTGAGAGCTTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCT TTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTAT GAGTACCCCCCTGTTCCTGCCCACACGCGTATGCTGACAGAGAGCACGCG CTGGAAATGGGAGGCAACCCGGACAAAGACCCCCCCTTCTTCTTCACCAA GCCACCGGACGCCGCCGTCGACGTTTCCGCGGCCGGCGCGGTCGTCCACT ACCCGCCGGAGACGGAAGATCTCCAGCACGAGGTGGAGATGGTCGTTGCC ATCGGGAAGGGTGGGTCTGCAGTGAGCGCCGCTCCAAGGAGATACATACC GTAAGAGTCGGAGAGATGGCACCCCCGTGTTAGCGTTTTTGTATAGCGTA TTGCTCCACAGCCAGGGGGGTACCACTGCCGAAAAGGGTGGTTTTGGAAA CATCTCGTCGACGGCTTTCCTGAGAGGTATCGGTTGGTGTTCGCACCCTC CTATTATAGTTGTGGAGAAATACGCTACAAAAAAACGCGAACACGGGGGT GCCATCTCTCCGACTCATACGGTACCTGGTAGATGGATAGGATCGTTGTT TGTACATGTCCATTGTTGTCGCCTTAGAAACAACGCAAAGCAGCGGCTGA TTGAACCACTCGCGGCAAAACAACGTACTTTCGTCTAGAATAGGACACAC ACCAAACCTTGTGCATTCATTGGGTATGGTTGATTTTCTGCTTTCGTGCA GCATAGTGTCGGGCAGATTGTTGTGTGGGTGTACGTACGGTTGAACTCGC CCACATCGTCGTGTTGTAACGACGTGTTAGTAACTGGGTGTGAAGCGTCT CCCAAGACGGGGAACGTCCCACGGAATTTCGCCGCGAGGGCGTTGATTTT CAAGATAAAGAGGGACCTCAAACATGTGCACAAGATTTTGGATACGCTTC AGCAGCAGTGTTGAATCAGCTCAAATAGCGCGAAGCCGCTAAAACAGCAG CTTTTCGTTGTAGACGATGCAGTTTTGGAGCACGGCAGAATTTTCCAGCA TCTCTTCTGCATCCCCCTCCCTCCCTGTACACCACGACACTCTACAAGAT AACAATCGAGAAGTTCATCACCACAGCAACGTCAACATGCCTTGTGTAAC CCACCGGCTGGCAGGAGGCCGCGGCATCCCAACGCGAGACGCTCTGCAAC ACGTCTTCGCCTACGGCGTTGGCGTGGACCTCACTCGGCGAGACATGCAG CGTGCCGCTAAGAAGGCCGGTCGCCCGTGGGACTGTAGCAAGGTGCGCGC ACTGATCGAGAGACAAAGAAAGCGTATGGCGCGTGTCGGCATGCATACGC TCGACTAAAGGCCTTGCGCTCCTGCTACGTATTTGCACACCGCCTCTGTA GCCAGTACCTGAGGTGAAACACACAGAGGTGACGTATGCCACGCCGCTGA CAAGCTCCTGCTACTTGTATCGTCGGAAGCTAGAAATGCTATTATTACCA AATCGTTGGCAGAGCAACTCCCCCCCCCCCGCGCGCCCTTCTCCCGCCCC CGATTTCTTTCCAACCCTGCGCGGCTACCATGGATCGTTCCGTACCACAT TTCGTAGGTTCGTTCTTGTTACCGTTTCGTTTCGCAACAAAAAACTGAAA CAGTCAAATCATCTAGAACGCCCTACGACCATTCCGCGGTGGTGCTGGCG TTTTCTGGAGTCTACAACTTGGTGGATTGCGCACATCAGCCAACAGGCTG CATTCGAAAACATACGCTCGCGTTCTTGTTCGCGCCTTGCTTCTGGTAAC CGGTGCGCAACTGCGGCAGGGTTTCGACAGCTCTGGACCCATCGGTGCCC TGACCCCGACTCCCCCGGCGAAGGGCGGGGGGTTAGGCGCTGCCGCCGGA CTCGCGGGCGACGAGGGGGGCCGCCGGATATGGTTGGAGGTGGGGGGGGG CAGACGCCAGGATTCGGTGCTCGGGGAGATGGTGTGGAGCGTCCCCGAGA TGATCGCCAGGTTGTCGGAGGTGAGGGGGGACGATGCGGAAGGGTACCGC CTTCTTTCTTCGGACGGGCTTGGTTGGTGCTCCACGGTCTTGGGTCGTGT CTCTTGCCTTGTAGTATGCTAGTCTACACGATTTGCTGTTGTTGATATTG GGAGGCAATCATTGGCAAGAGGTATATAAGTACGCGTCGGATGGGTTTGT GTCGTCGAAGCGTTGTCTGTCGCAATCTGTTTCCCTGCTTGAACCCTCCT TTTTCGCGCCGCATGTGCGTGCACCTGAGAGTATCGATCGACCACGTAGC TTCTCTGCGTTGAGCTCGGACCCATTGGCATCCATGCGCGTGTCGCCCCC ATGCGGTCTTTGCTGTTGACACCCGCCAGAAAACAGGAGTCCTTACCCCC TCTCCTGCTGCCGCACCTCGCAAGGTATTCGCATGATGCACGGCAGTACA CTTCTTACCCTAGTGCTGCTGTCAATCGCATAGCTTCTTCACGTTTGAAG TGGCTAAAATACGTCCTGTTCACAATGCCGAACCTCGCATGCTAATAGCA CAATGCATGGTCATAGACCCCCCATCAACTACAAGTATCCCCTCTTAACA CTGCTGTTAATCGGACAGCTCTTCACCCTAGAGGCTGGGGACGTCTTGTT CACGGGGACCCCGTCGGGGGTAGCACCTCTGGCGGTGGGCGACGACGTGG AAGCGAGGGTCGAGGGCTTGGAACCGTGCCGATTCCGGGTCGGCCCGCTG CTTCCGCCAACGACTCACTTATTAGCATCAGAAGTGTAGAAACGAAACTA TGCAAAGGTTCACCGCCAGGGAAACATGGGCTGCTCTGTCGTTGTATTGG TCGCATGGTAGAGCACCTCGCGCATTGGTACGGACAACGGGAGCGGAGCA ATTTTGAGCGCGGGTGTCTTGTGGGTCGCTTCCTCCGTCTGTGTCGACTT TGGAGGGCTGAATTGAGTCTTCAGGTACAATCAAAATTTTCTCGTGTGAC GACAGCAACAGCTGTCTGGGAAGTCGCGAGAAAAATATTTTGGGCGAGGG CGGCGAAATGGCCTCGAGACGATCACAGAGTCGATCAATGCAGCGTTGAT GTGGCGCACTGGAAGCCTCGTGGAAGAGGGTGGAGGACGGAACGCTTTCA TGTGAAACACCAACACCCGGCGTTGTGATACCGCCTTGCTGAAGGTACAG AATGTCAGCGTGCAGGATTCGCCATTTCTTCTGTCTTGACCCGATCGACG GCAGGCAGCGCAAGCGCGATCAAATTTCTACATGTTAAGATAGTCCGGGG TTATGATAGGTGGTCGATAAAATGGGCCATGAAGAACATATTCCCGACGG TCCAAGTAGGTCAACAGATGTTGGGGTTCCGAAAGGTGCCACAAGAGACA TATCCTAGCACCGGGGAGTAGCGGAGAATGGCCCGACTAGGGGATATCGG GCGCAAAATCAACATGAGCGCAAAAACATACAGCGGTGACAAGTTTTG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2195910..2200607-

>mRNA_Ecto-sp6_S_contig10.633.1 ID=mRNA_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2195910..2200607- (Ectocarpus species6 EcLAC_371)
ATGGGAGGCAACCCGGACAAAGACCCCCCCTTCTTCTTCACCAAGCCACC
GGACGCCGCCGTCGACGTTTCCGCGGCCGGCGCGGTCGTCCACTACCCGC
CGGAGACGGAAGATCTCCAGCACGAGGTGGAGATGGTCGTTGCCATCGGG
AAGGGAGGCCGCGGCATCCCAACGCGAGACGCTCTGCAACACGTCTTCGC
CTACGGCGTTGGCGTGGACCTCACTCGGCGAGACATGCAGCGTGCCGCTA
AGAAGGCCGGTCGCCCGTGGGACTGTAGCAAGGGTTTCGACAGCTCTGGA
CCCATCGGTGCCCTGACCCCGACTCCCCCGGCGAAGGGCGGGGGGTTAGG
CGCTGCCGCCGGACTCGCGGGCGACGAGGGGGGCCGCCGGATATGGTTGG
AGGTGGGGGGGGGCAGACGCCAGGATTCGGTGCTCGGGGAGATGGTGTGG
AGCGTCCCCGAGATGATCGCCAGGTTGTCGGAGCTCTTCACCCTAGAGGC
TGGGGACGTCTTGTTCACGGGGACCCCGTCGGGGGTAGCACCTCTGGCGG
TGGGCGACGACGTGGAAGCGAGGGTCGAGGGCTTGGAACCGTGCCGATTC
CGGGTCGGCCCGCTGCTTCCGCCAACGACTCACTTATTAGCATCAGAAGT
GTAG
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