mRNA_Ecto-sp6_S_contig10.633.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A6H5K6H3_9PHAE (FAA_hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H3_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 2.680e-141 Identity = 207/216 (95.83%), Postives = 210/216 (97.22%), Query Frame = 2
Query: 236 EHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTTH 883
EHALEMGGNPDK+PPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGR IP RDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALT TPPAKGGG+GAAAGL GDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTP GVAPLAVGDDVEA VEGLEPCRFRVGP+LPPTTH
Sbjct: 72 EHALEMGGNPDKEPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRCIPPRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTTTPPAKGGGVGAAAGLVGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPKGVAPLAVGDDVEAGVEGLEPCRFRVGPVLPPTTH 287
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: D7FPA3_ECTSI (Fumarylacetoacetate (FAA) hydrolase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPA3_ECTSI) HSP 1 Score: 313 bits (801), Expect = 7.110e-102 Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 2
Query: 404 GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTTH 883
GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPT PAK GG+GAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPT H
Sbjct: 10 GGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTLPAKDGGVGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGPLLPPTIH 169
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: B6IQ60_RHOCS (Fumarylacetoacetate (FAA) hydrolase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IQ60_RHOCS) HSP 1 Score: 256 bits (655), Expect = 5.770e-79 Identity = 132/234 (56.41%), Postives = 161/234 (68.80%), Query Frame = 2
Query: 161 PSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGP 862
P+LA+VG ++FPVRR+YCVG NY HA EMGG+PD++PPFFF KP DA V A GA V YPP T+DLQHEVE+VVA+G+GGR IP +A VFA VG+DLTRRD+Q AA+KAG+PWD +K FD S P+G L P P AG RIWL V G RRQ + L +M WSV E+IA LS LF L GD++FTGTPSGV L GD ++A ++GLEP R+ P
Sbjct: 16 PTLAIVGRPERFPVRRIYCVGRNYAAHAREMGGDPDREPPFFFQKPADAVV---ADGADVPYPPRTDDLQHEVELVVALGRGGRNIPVAEAGALVFAQAVGIDLTRRDLQAAARKAGKPWDTAKAFDHSAPVGILHPVGP------------AGPLTRGRIWLAVNGDRRQQADLADMTWSVAEVIAELSTLFDLAPGDLIFTGTPSGVGSLLPGDRIDAGIDGLEPLVTRIVP 234
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A2U8GRV2_9RHOO (5-carboxymethyl-2-hydroxymuconate isomerase n=4 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2U8GRV2_9RHOO) HSP 1 Score: 251 bits (642), Expect = 4.860e-77 Identity = 127/235 (54.04%), Postives = 162/235 (68.94%), Query Frame = 2
Query: 155 AAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
A PS+AV GS ++FPVRRVYCVG NY +HA EMG +PD++PPFFFTK PD+ + A+G+V YP E+ D+ HE+E+VVAIG+GGR I DAL+HVF YGVG+D+TRRD+Q AAKKAGRPW+ K FD++ P + PA G G AA IWL+V G RRQ L +WSVPE+IA LS F LEAGD+++TGTP+GV P+ VGD +E + G+ VG
Sbjct: 14 AVPSVAVSGSAKRFPVRRVYCVGRNYADHAREMGHDPDREPPFFFTKHPDSLI---ASGSVFPYPSESNDVHHEIELVVAIGRGGRNIAAEDALEHVFGYGVGLDMTRRDLQGAAKKAGRPWEIGKAFDAAAPCSEIV---PASGSGHPAAG---------EIWLDVNGERRQQGDLSSQIWSVPEVIAHLSRYFALEAGDLIYTGTPAGVGPVKVGDRLEGGIAGVGSIAVTVG 233
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A6N7DA73_9BURK (Fumarylpyruvate hydrolase n=1 Tax=Xylophilus sp. TaxID=2653893 RepID=A0A6N7DA73_9BURK) HSP 1 Score: 249 bits (635), Expect = 4.870e-76 Identity = 128/245 (52.24%), Postives = 161/245 (65.71%), Query Frame = 2
Query: 137 YAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTP----PAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
YA+ A SLA+ G ++FP+RRV+CVG NY EHA EMG +PD++PPFFF+KP DA V A V YPP T DL HE+E++VAIGKGG IP AL+HV+ YGVGVDLTRRD+Q AAKK GRPWD +KGFD+SGP L P P+KG RIWL V G RQ LG+++W V ++IA LS+ LE GD++FTGTP+GV P+ GD++ VEG+ FR+G
Sbjct: 5 YAIAPPAVASLAIQGQPERFPLRRVFCVGRNYAEHAREMGHDPDREPPFFFSKPADAVV---PAEGTVPYPPLTSDLHHEIELLVAIGKGGADIPAAQALEHVWGYGVGVDLTRRDLQAAAKKQGRPWDGAKGFDASGPSAPLVPASKIGHPSKG----------------RIWLSVNGQERQAGDLGDLIWPVADVIAYLSQSVRLEPGDLIFTGTPAGVGPVQPGDEIHGGVEGVAELHFRLG 230
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A0S1Y7W2_9BORD (Fumarylacetoacetate hydrolase n=5 Tax=Alcaligenaceae TaxID=506 RepID=A0A0S1Y7W2_9BORD) HSP 1 Score: 246 bits (627), Expect = 7.830e-75 Identity = 126/246 (51.22%), Postives = 158/246 (64.23%), Query Frame = 2
Query: 137 YAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTP----PAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVGP 862
Y + SLAV GSD++FPVRRVYCVG NY EHA EMG +PD+DPPFFF+KP DA V A + YPP+TED +E+E++VAIGKGG+ IP AL HV+ Y VG+DLTRRD+Q AKK GRPW+ +KGFD SGP L P P+KG RIWL V G RQ L E++WSVPE+I+ +SE L+ GD++FTGTP+GV + GD V V+G+ +VGP
Sbjct: 4 YVITPAEQASLAVAGSDKRFPVRRVYCVGRNYAEHAREMGHDPDRDPPFFFSKPADAIV---PAEGTIQYPPQTEDFHYEIELIVAIGKGGKNIPVDQALDHVWGYSVGIDLTRRDLQATAKKMGRPWEWAKGFDVSGPSTPLKPASEVGHPSKG----------------RIWLGVNGDVRQQGDLSELIWSVPEVISYISESMALQPGDLIFTGTPAGVGAIRPGDVVTGGVDGIGSFEMKVGP 230
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: UPI00105EA182 (fumarylacetoacetate hydrolase family protein n=1 Tax=Paraburkholderia flava TaxID=2547393 RepID=UPI00105EA182) HSP 1 Score: 246 bits (627), Expect = 7.830e-75 Identity = 124/243 (51.03%), Postives = 160/243 (65.84%), Query Frame = 2
Query: 131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRVG 859
+Q+A+P A S+A+ GSD++FPVRRV+CVG NY +HALEMGGNPD++PPFFF KP DA V A + YPP T DL HE+EMV+AIGK G + DAL V+ YG+GVDLTRRD+Q AKK GRPWD KGFD+S P+ TP P G G RIWL V G RQ L +++W V ++I +SE TL+ GD++F+GTP+GVA L GD V+ +EG+ F++G
Sbjct: 2 VQFAIPAPAVTSVAIAGSDERFPVRRVFCVGRNYADHALEMGGNPDREPPFFFQKPTDAVV---PAAGTIPYPPLTRDLHHEIEMVIAIGKEGTNVAAGDALDLVWGYGLGVDLTRRDLQGEAKKTGRPWDWGKGFDASAPV---TPLHPVS---------AVGHLGAGRIWLSVNGTLRQQGDLNQLIWPVADIIRYVSESVTLKPGDLIFSGTPAGVAALQPGDTVQGGLEGIGEFEFKIG 229
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A8J3DWL2_9RHOB (Fumarylpyruvate hydrolase n=1 Tax=Agaricicola taiwanensis TaxID=591372 RepID=A0A8J3DWL2_9RHOB) HSP 1 Score: 244 bits (623), Expect = 2.450e-74 Identity = 126/228 (55.26%), Postives = 155/228 (67.98%), Query Frame = 2
Query: 158 APS-LAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLE 838
APS + V G+DQ FPVRR+YCVG NY +HA EMGG+PD++PPFFFTKP DA V +G+ V YPP+T++L HE+E+VVAIGK G IP AL+HV+ Y VG+DLTRRD+Q AKKAGRPWD +KGFD S P+ AL P A G RIWL+V G RQDS L + +W+VPE IA LS L LE GD+L TGTP GV + GD V ++GL+
Sbjct: 8 APSVMPVAGTDQTFPVRRIYCVGQNYADHAREMGGDPDRNPPFFFTKPADAIV---PSGSAVPYPPQTDNLHHEIELVVAIGKAGADIPVDRALEHVYGYTVGIDLTRRDLQAEAKKAGRPWDMAKGFDKSAPMAALHP------------AEKIGHPSSGRIWLKVNDGIRQDSDLAKQIWAVPEAIAYLSTLVRLEPGDLLMTGTPDGVGAIVRGDRVSGGIDGLD 220
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A2E7FBA2_9PROT (Fumarylacetoacetate hydrolase n=2 Tax=unclassified Rhodospirillaceae TaxID=41296 RepID=A0A2E7FBA2_9PROT) HSP 1 Score: 244 bits (623), Expect = 2.800e-74 Identity = 121/236 (51.27%), Postives = 157/236 (66.53%), Query Frame = 2
Query: 131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLE 838
++YA+P S+A+ GSD +FPVRR+YCVG NYR HA+EMG +PD+DPPFFF KP DA V+ GA + YPP+TE+L HE+E+V AIG GG I DAL HV+ YGVG+DLTRRD+Q AK+ GRPWD KGFD S P AL P + G E R IW++V G RQ+S L +WS E I+ LS L TL+AGD+++ GTP GVA + GD +E ++G++
Sbjct: 1 MKYAIPPFEQVSIAIEGSDDRFPVRRIYCVGRNYRAHAIEMGADPDRDPPFFFMKPADAIVE---NGATIPYPPQTENLHHEIELVAAIGAGGADISVADALNHVWGYGVGIDLTRRDIQNKAKEMGRPWDMGKGFDQSAPCTALHPV---------SEVGHPDTEESRSIWIKVNGKIRQESTLDHHIWSTAETISYLSGLVTLQAGDLIYMGTPDGVAAVMSGDKMEGHIDGVD 224
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Match: A0A1B1ANA1_9PROT (Fumarylacetoacetate hydrolase n=2 Tax=Candidatus Viadribacter manganicus TaxID=1759059 RepID=A0A1B1ANA1_9PROT) HSP 1 Score: 243 bits (620), Expect = 7.330e-74 Identity = 121/242 (50.00%), Postives = 157/242 (64.88%), Query Frame = 2
Query: 131 LQYAVPRVAAPSLAVVGSDQKFPVRRVYCVGSNYREHALEMGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGKGGRGIPTRDALQHVFAYGVGVDLTRRDMQRAAKKAGRPWDCSKGFDSSGPIGALTPTPPAKGGGLGAAAGLAGDEGGRRIWLEVGGGRRQDSVLGEMVWSVPEMIARLSELFTLEAGDVLFTGTPSGVAPLAVGDDVEARVEGLEPCRFRV 856
+Q+ PS+A+ GSD +FPVRR++CVG NY +H EMG +P +PP FF+KP DA V+ +G + YP T + HEVE+V+AIG GG I DA+ +V+ YGVGVDLTRRD Q AKKAG PWD +KGFD S PI ALTP GD RIW++V G RQD+ +M+WS+PE+IA LS+ + L GD++FTG+PSGVAPL GD +E V+GL P RF +
Sbjct: 1 MQFTFAAPPQPSVAIAGSDVRFPVRRIFCVGRNYADHVREMGNDPKSEPPLFFSKPADAVVE---SGNAIPYPSHTSNFHHEVELVIAIGAGGSNIVVADAINYVWGYGVGVDLTRRDRQAEAKKAGAPWDTAKGFDRSAPISALTPIAS------------CGDVTNARIWIKVNGETRQDANTHDMIWSIPEIIAALSQWWDLRPGDLIFTGSPSGVAPLNPGDTIECGVDGLAPLRFSI 227 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.633.1 >prot_Ecto-sp6_S_contig10.633.1 ID=prot_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=218bp MGGNPDKDPPFFFTKPPDAAVDVSAAGAVVHYPPETEDLQHEVEMVVAIGback to top mRNA from alignment at Ecto-sp6_S_contig10:2195910..2200607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.633.1 ID=mRNA_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4698bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2195910..2200607- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2195910..2200607- >mRNA_Ecto-sp6_S_contig10.633.1 ID=mRNA_Ecto-sp6_S_contig10.633.1|Name=mRNA_Ecto-sp6_S_contig10.633.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2195910..2200607- (Ectocarpus species6 EcLAC_371)back to top |