mRNA_Ecto-sp6_S_contig10.524.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 1.630e-162 Identity = 363/416 (87.26%), Postives = 368/416 (88.46%), Query Frame = 1
Query: 4 MTRSLTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAGSVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQG-QTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL 1239
MTRSLTVKTLKGEVFRIDVAEESVMSDVK KI+EVRGHDP TQVLICGGKTLKDGD LA SVAAGGFLVLMVKRRANPVANAAP PAA XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NE L++DPTNV+MLTAMGFP DQATAALRAAFNDVSRAASYLMEGIP N GAG+GG DAR XXXXXXXXXXXXXXX XXXX AGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQ LATQSPELI RINQHPD FLRLMNEPPDAEGQAIMEMG EGLLEGMDQE XXXXXXXXXXXXXXXXXX QTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL
Sbjct: 1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVKRRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGANETLSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPHNAGAGTGGGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQALATQSPELIGRINQHPDAFLRLMNEPPDAEGQAIMEMGVEGLLEGMDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL 416
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.460e-37 Identity = 101/257 (39.30%), Postives = 132/257 (51.36%), Query Frame = 1
Query: 478 MGFPEDQATAALRAAFNDVSRAASYLMEGIPD----NVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGM--DQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFE 1230
MGFPEDQ AAL+AAFN++ AA+YLM G+PD + A + G G A +A G E G NPL +R+HPQF ELR LV+ NPA LP+++QG+ QSPEL+ IN HP F++LMN D ++G EG LEG+ D+E GG Q T LT E++AAV LMA+VP R +VIEA+++CDKN E A N+LF+
Sbjct: 1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIETSGVGGTVGIVPADILSGPMGDTLGD---ADDMEAAQGFEGG-ANPLAALRYHPQFLELRELVQSNPAALPEIIQGIGEQSPELLNMINAHPQAFVQLMNSTGD-------DLGMEGDLEGVLGDEEGEQQESMDA---------------------GGSDQAPTAALTAEDNAAVDQLMAIVPNMSRQRVIEAYLSCDKNVEYAMNMLFD 225
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.470e-29 Identity = 190/467 (40.69%), Postives = 230/467 (49.25%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDP----------------TNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNV--GAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP---------PDAEGQAIMEMGAEG------------LLEGMDQEDXXXXXXXXXXXXXXXXXXSF------PGV------------GVAGREGGQGQTVT---VELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
LTVKTL+G F +D +S VK +I E++ Q LI GK LKD LA +V FLV+MV + AP PAAAXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ L MGFPEDQ +ALRAAFN+ RA YLM GIP+ A + A GG A+ A A A+ G EA N L +R HPQFD LR LV+ NPA LP VLQ + QSPEL+ I+Q+ D F++++NEP P G A ++G G L++ + E S PG G+ G GG G + L+EEE AAV L M G R VI+A++ACDKN +AAN L ++
Sbjct: 3 LTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQKFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPK------APKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGAS---------------------AATATAVTGDEA---NTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFDLGMGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGGGLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFLMDS 437
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.530e-28 Identity = 168/439 (38.27%), Postives = 207/439 (47.15%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKRRA---NPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP----------------PDAEG-------QAIM------EMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
LTVKTL+G I+ E + VK K+ V G Q LI GK LKD LA ++ FLV+MV + P PAPAAAXXXXXXXXXXXXXXXX XXXXXXXXX EAL + L MGFPE+Q AL+AAFN+ RA YLM GIP+ A A A G N L +R HPQFD LR L++ NPA LP VLQ + +QSPEL+ I+ + ++F+R++NEP DA G Q +M + A GM + XXXXXXXXXXXXXX + G G G + LTEEE AAV L M G R++VI+A++ACDKN +AAN L ++
Sbjct: 3 LTVKTLQGVAHAIEAELEDTVLSVKHKVEAVNGAAVENQKLIHAGKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAAGAEGLVV------------GEALN---DTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPEQPAA----------------------------------PPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQLMASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGG---GVGAPTRIHLTEEEAAAVGRLCDM--GFDRNEVIQAYLACDKNEALAANFLMDS 387
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A1Y1XXG2_9FUNG (UV excision repair protein RAD23 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXG2_9FUNG) HSP 1 Score: 126 bits (316), Expect = 1.630e-28 Identity = 152/412 (36.89%), Postives = 208/412 (50.49%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAAPAPAA-AXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDP---TNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
+T+KTL+ + F+IDV E +S +K KI + +GH Q LI GK L D +A +V F+V+MV K +A+P A +PAPA A XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX L P + + MGF +Q T ALRA+FN+ RA YLM GIP+++ + + + A + G G L+F+R PQF +LR LV++NPA+L +LQ L +P+L++ IN + D FL+L++E G EG +G T+++T+EE A++ L + G R +VIEA+ ACDKN E+AAN LF++
Sbjct: 3 VTIKTLQQKAFQIDVEPEDKISTLKEKIEQSQGHQVSHQKLIFSGKILNDDQTVASCNVTEKDFMVVMVSKPKASPAAAKSPAPATPAVTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGWESGNGLVTGPEYEAAINNMIEMGFEREQVTKALRASFNNPERAVEYLMNGIPEHLLGNTQQPAQQEAHTPSQVPASPASGQPQNLFTAAAQQAAQERGAQPQATGGGGDLSFLRSQPQFQQLRQLVQQNPALLQPLLQQLGQANPQLLQLINANQDTFLQLLSEA-----------GGEGXXX---------------------------------XDGIPPGAHTIQVTQEEKEAIERLCGL--GFDRARVIEAYFACDKNEELAANYLFDH 368
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.200e-28 Identity = 155/441 (35.15%), Postives = 202/441 (45.80%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP----------PDAEGQAIMEMGAEGLLE-----------------------GMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
LTVKTL+G + I+ E + VK K+ V G Q LI GK LKD L+ +V FLV+MV K + A PAP + XXXXXXXXXXXXXXXX XXXXXXXXXXXX EAL+ V L MGFPEDQ AAL+AAF++ RA YLM GIP+ A + A A G+ G L +R HPQFD LR +++ NP+ LP VLQ + Q+P+L++ I+Q+ + F+ ++NEP P + GA+G+ GM E + AG EGG G + LTEEE AAV L+ M G R++VI+A++ACDKN +AAN L ++
Sbjct: 3 LTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQKLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPAAGAPGIVV---------GEALS---ETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAA--------------------------------PPASTTAPASGGL--GAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSVPASPFGDSGADGMPTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM--AGGEGGHGAPTRIHLTEEEAAAVGRLVDM--GFDRNEVIQAYLACDKNEALAANFLMDS 393
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A8H4RQ14_9HELO (UV excision repair protein RAD23 n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RQ14_9HELO) HSP 1 Score: 126 bits (316), Expect = 2.240e-28 Identity = 149/440 (33.86%), Postives = 202/440 (45.91%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAA--------PAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNV-----------GA--------------GSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFE 1230
LT K LK + F I+ ++SDVK KIS+ +G + TQ LI GK L+D + + + GF+V M+ K +A P A+ + PAPAAAXXXXXXXXXXX XXXXXXXXXXX E A + + +MGF Q A+RAAF + RA YL+ GIPDNV GA G GG + +AA XX G A G AG GN L+F+R +PQF +LR +V++NP ML +LQ + +P+L + I QHP+ FL+L++E D + A + GA+ + +TEEE AA++ L+ + G RDQ I+A+ ACDKN E+AAN LF+
Sbjct: 3 LTFKDLKQQKFVIEAEPSELISDVKEKISKEKGWEASTQKLIYSGKILQDANTVESYKIEEKGFIVCMISKPKAAPSASTSTPSKAPSTPAPAAAXXXXXXXXXXXVASSSANVVPATPSPAGSGAAXXXXXXXXXXXGTASSGLAMGAERAA----QIAEMESMGFERSQIDLAMRAAFYNSERAIEYLLTGIPDNVQQEQRPTAPAPGAQXXXXXXXXXXXXXGDGGEEPINLFEAAAQAGAXXRGGADAARGAAGNLFGAAGVGAGAAAGLGN-LDFLRNNPQFQQLRQVVQQNPQMLEPILQQVGAGNPQLAQLIGQHPEQFLQLLSE--DGDNDAPLPPGAQA----------------------------------------------ISVTEEERAAIERLVLL--GFPRDQAIQAYFACDKNEELAANFLFD 387
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A8K1FAF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAF9_PYTOL) HSP 1 Score: 125 bits (315), Expect = 6.220e-28 Identity = 174/459 (37.91%), Postives = 205/459 (44.66%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKR---------------RANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP-----------PDAEGQAIMEMGAEG-----------LLE--------------GMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVT-VELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
L+VKTL+G F I+ + VK KI E + Q LI GK LKD PL+ + FLV+MV + AN A AAPA XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX E + V+ L MGFPEDQ AAL+AAFN+ RA YLM GIP AG A A + L +R HPQFD LR LV+ NPA LP VLQ + QSPEL+ INQ+ +NEP PDA A +MG G LL+ GM E X G AG GG T + LTEEE AAV L +M G R +V++A++ACDKN +AAN L +N
Sbjct: 3 LSVKTLQGVAFTIEAEPTDTVVAVKGKIQEAQSFSIEQQKLIHAGKVLKDESPLSEYGIKENDFLVVMVTKPKAPKPAXXXXXXXXXANTPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPAVQGGAVVVGEEMN---ATVQQLCEMGFPEDQVRAALQAAFNNPDRAVEYLMNGIPQRA-------------------------------TNPPPSAGAADTAAPGXAAAAS-LEALRQHPQFDALRQLVQTNPAALPAVLQQIGGQSPELLRLINQNXXXXXXXLNEPIGTGSAPSAVAPDAGAGAPFDMGGMGGGMPSPQQIQQLLDSLSPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPEAMEXXXXSXGGAGGAGGAPPGATRIMLTEEEAAAVDRLCSM--GFDRSEVVQAYLACDKNETLAANFLMDN 424
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A813H1J7_POLGL (UV excision repair protein RAD23 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H1J7_POLGL) HSP 1 Score: 124 bits (312), Expect = 8.430e-28 Identity = 149/439 (33.94%), Postives = 202/439 (46.01%), Query Frame = 1
Query: 16 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPG-TQVLICGGKTLKDGDPLAGS-VAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNP------LNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPD-----------------------AEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXX--SFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
+T K LKGE F+++ E + ++K KI+E + P Q LI GK L D + S V + GF+V+MV + P +AAPA XXXXXXXXXXXXXX A A A + + L MGF Q L+AAFN+ RA YLM GIP G +AA XXXXXXXXXXXXXX A M AG G P L +R HPQF +L G V +NP +L Q+L +A PE+++ I HP+ F+R++ E A+ A++E +L ++Q D + G G+ G GG + ++LTEEE+AAV+ L A+ G ++ +A++ACDKN EMAAN LF+N
Sbjct: 2 ITFKPLKGENFQVEANPEEKIGELKKKIAEAKPEYPADAQKLIFAGKILADDATIQDSGVTSEGFVVIMVAKAKPPPGSAAPAXXXXTPXXXXXXXXXXXXXXXXXAEAQAAAGLV--------------------------AAAGMESTITQLCDMGFERPQVIRCLQAAFNNPDRAVEYLMSGIPA-------------GAEAAAAQQXXXXXXXXXXXXXXEG------AFPAMPAGGGTPEPLPPALAELRNHPQFQQLAGAVAQNPQLLAQMLPAIAQTHPEIVQAIQAHPEAFMRMLQEAGAGXXXXXXXQDPRHANMVQLAAMLAQNPAMLEQILPEMLPEIEQNDPAAAAAIRENPQILLQMIQAAAAGGGMPGGPGGSPGAMQIQLTEEENAAVERLAAL--GFDKNNAAQAYLACDKNEEMAANFLFDN 393
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A022R109_ERYGU (Ubiquitin receptor RAD23 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R109_ERYGU) HSP 1 Score: 121 bits (304), Expect = 8.100e-27 Identity = 142/418 (33.97%), Postives = 183/418 (43.78%), Query Frame = 1
Query: 22 VKTLKGEVFRIDVAEESVMSDVKTKISEVRG---HDPGTQVLICGGKTLKDGDPL-AGSVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDP--TNVEMLTAMG---FPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGG-----GDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 1233
VKTLKG F I+V E ++DVK I V+G + G Q+LI GK LKD L A +VA F+V+M+ + + AAPAPAA AA XXXXXXXXXXXXXXXXXX + +A T V+ + MG + D ALRAAFN+ RA YL GIP+ + GG A GL MG L+F+R QF LR +V+ NP +L +LQ L Q+P+L+ I H DFLRL+NEP + EG + + L E M Q TV +T EE A++ L AM G R V+E F AC+KN E+AAN L ++
Sbjct: 5 VKTLKGSHFEIEVKPEDTVADVKKNIETVQGSNIYPAGQQMLIHQGKVLKDDTTLEANNVAEKSFVVIMLTKSKASSSGAAPAPAAPLSTAQPVSNTSQPTQPVTAAPTPAXXXXXXXXXXXXXXXXXXAASVGVYDQAASNLVAGSTLETTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEIPPVAQLPAGGQPVIPSTQAAAPPVAAPGGGPNANPLDLFPQGLPN--MGGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQDHQADFLRLINEPVEGEGNILGQ-----LAEAMPQ--------------------------------------TVNVTPEEREAIERLEAM--GFDRALVLEVFFACNKNEELAANYLLDH 375 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.524.1 >prot_Ecto-sp6_S_contig10.524.1 ID=prot_Ecto-sp6_S_contig10.524.1|Name=mRNA_Ecto-sp6_S_contig10.524.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=413bp MTRSLTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKback to top mRNA from alignment at Ecto-sp6_S_contig10:1122991..1131611+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.524.1 ID=mRNA_Ecto-sp6_S_contig10.524.1|Name=mRNA_Ecto-sp6_S_contig10.524.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8621bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1122991..1131611+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1122991..1131611+ >mRNA_Ecto-sp6_S_contig10.524.1 ID=mRNA_Ecto-sp6_S_contig10.524.1|Name=mRNA_Ecto-sp6_S_contig10.524.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1239bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1122991..1131611+ (Ectocarpus species6 EcLAC_371)back to top |