prot_Ecto-sp6_S_contig10.524.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.524.1
Unique Name	prot_Ecto-sp6_S_contig10.524.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	413

Homology

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 4.570e-163
Identity = 363/416 (87.26%), Postives = 368/416 (88.46%), Query Frame = 0

Query:    1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAGSVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQG-QTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL 412
            MTRSLTVKTLKGEVFRIDVAEESVMSDVK KI+EVRGHDP TQVLICGGKTLKDGD LA SVAAGGFLVLMVKRRANPVANAAP PAA XXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    NE L++DPTNV+MLTAMGFP DQATAALRAAFNDVSRAASYLMEGIP N GAG+GG DAR      XXXXXXXXXXXXXXX XXXX AGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQ LATQSPELI RINQHPD FLRLMNEPPDAEGQAIMEMG EGLLEGMDQE XXXXXXXXXXXXXXXXXX                QTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL
Sbjct:    1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVKRRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGANETLSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPHNAGAGTGGGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQALATQSPELIGRINQHPDAFLRLMNEPPDAEGQAIMEMGVEGLLEGMDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL 416

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.240e-37
Identity = 101/257 (39.30%), Postives = 132/257 (51.36%), Query Frame = 0

Query:  159 MGFPEDQATAALRAAFNDVSRAASYLMEGIPD----NVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGM--DQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFE 409
            MGFPEDQ  AAL+AAFN++  AA+YLM G+PD    +  A     +  G G                        A   +A  G E G  NPL  +R+HPQF ELR LV+ NPA LP+++QG+  QSPEL+  IN HP  F++LMN   D       ++G EG LEG+  D+E                              GG  Q  T  LT E++AAV  LMA+VP   R +VIEA+++CDKN E A N+LF+
Sbjct:    1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIETSGVGGTVGIVPADILSGPMGDTLGD---ADDMEAAQGFEGG-ANPLAALRYHPQFLELRELVQSNPAALPEIIQGIGEQSPELLNMINAHPQAFVQLMNSTGD-------DLGMEGDLEGVLGDEEGEQQESMDA---------------------GGSDQAPTAALTAEDNAAVDQLMAIVPNMSRQRVIEAYLSCDKNVEYAMNMLFD 225

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.910e-29
Identity = 190/467 (40.69%), Postives = 230/467 (49.25%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDP----------------TNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNV--GAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP---------PDAEGQAIMEMGAEG------------LLEGMDQEDXXXXXXXXXXXXXXXXXXSF------PGV------------GVAGREGGQGQTVT---VELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            LTVKTL+G  F +D      +S VK +I E++      Q LI  GK LKD   LA  +V    FLV+MV +        AP PAAAXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          V+ L  MGFPEDQ  +ALRAAFN+  RA  YLM GIP+     A +    A GG  A+                     A  A A+ G EA   N L  +R HPQFD LR LV+ NPA LP VLQ +  QSPEL+  I+Q+ D F++++NEP         P   G A  ++G  G            L++ +  E                   S       PG             G+ G  GG G       + L+EEE AAV  L  M  G  R  VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQKFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPK------APKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGAS---------------------AATATAVTGDEA---NTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFDLGMGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGGGLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFLMDS 437

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.830e-28
Identity = 168/439 (38.27%), Postives = 207/439 (47.15%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKRRA---NPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP----------------PDAEG-------QAIM------EMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            LTVKTL+G    I+   E  +  VK K+  V G     Q LI  GK LKD   LA  ++    FLV+MV +      P     PAPAAAXXXXXXXXXXXXXXXX    XXXXXXXXX                         EAL      +  L  MGFPE+Q   AL+AAFN+  RA  YLM GIP+   A                                      A A      G  N L  +R HPQFD LR L++ NPA LP VLQ + +QSPEL+  I+ + ++F+R++NEP                 DA G       Q +M      +  A     GM  +   XXXXXXXXXXXXXX      +   G   G G    + LTEEE AAV  L  M  G  R++VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAHAIEAELEDTVLSVKHKVEAVNGAAVENQKLIHAGKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAAGAEGLVV------------GEALN---DTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPEQPAA----------------------------------PPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQLMASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGG---GVGAPTRIHLTEEEAAAVGRLCDM--GFDRNEVIQAYLACDKNEALAANFLMDS 387

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A1Y1XXG2_9FUNG (UV excision repair protein RAD23 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXG2_9FUNG)

HSP 1 Score: 124 bits (312), Expect = 1.990e-28
Identity = 152/412 (36.89%), Postives = 208/412 (50.49%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAAPAPAA-AXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDP---TNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            +T+KTL+ + F+IDV  E  +S +K KI + +GH    Q LI  GK L D   +A  +V    F+V+MV K +A+P A  +PAPA  A     XXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXX         L   P     +  +  MGF  +Q T ALRA+FN+  RA  YLM GIP+++   +     +     +                     A   +       G G  L+F+R  PQF +LR LV++NPA+L  +LQ L   +P+L++ IN + D FL+L++E            G EG                                     +G      T+++T+EE  A++ L  +  G  R +VIEA+ ACDKN E+AAN LF++
Sbjct:    3 VTIKTLQQKAFQIDVEPEDKISTLKEKIEQSQGHQVSHQKLIFSGKILNDDQTVASCNVTEKDFMVVMVSKPKASPAAAKSPAPATPAVTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGWESGNGLVTGPEYEAAINNMIEMGFEREQVTKALRASFNNPERAVEYLMNGIPEHLLGNTQQPAQQEAHTPSQVPASPASGQPQNLFTAAAQQAAQERGAQPQATGGGGDLSFLRSQPQFQQLRQLVQQNPALLQPLLQQLGQANPQLLQLINANQDTFLQLLSEA-----------GGEGXXX---------------------------------XDGIPPGAHTIQVTQEEKEAIERLCGL--GFDRARVIEAYFACDKNEELAANYLFDH 368

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.630e-28
Identity = 155/441 (35.15%), Postives = 202/441 (45.80%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP----------PDAEGQAIMEMGAEGLLE-----------------------GMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            LTVKTL+G  + I+   E  +  VK K+  V G     Q LI  GK LKD   L+  +V    FLV+MV K +      A PAP + XXXXXXXXXXXXXXXX    XXXXXXXXXXXX                      EAL+     V  L  MGFPEDQ  AAL+AAF++  RA  YLM GIP+   A                                   +  A A  G+  G    L  +R HPQFD LR +++ NP+ LP VLQ +  Q+P+L++ I+Q+ + F+ ++NEP          P        + GA+G+                         GM  E                       +  AG EGG G    + LTEEE AAV  L+ M  G  R++VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQKLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPAAGAPGIVV---------GEALS---ETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAA--------------------------------PPASTTAPASGGL--GAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSVPASPFGDSGADGMPTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM--AGGEGGHGAPTRIHLTEEEAAAVGRLVDM--GFDRNEVIQAYLACDKNEALAANFLMDS 393

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A8H4RQ14_9HELO (UV excision repair protein RAD23 n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RQ14_9HELO)

HSP 1 Score: 124 bits (312), Expect = 2.710e-28
Identity = 149/440 (33.86%), Postives = 202/440 (45.91%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMV-KRRANPVANAA--------PAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNV-----------GA--------------GSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFE 409
            LT K LK + F I+     ++SDVK KIS+ +G +  TQ LI  GK L+D + +    +   GF+V M+ K +A P A+ +        PAPAAAXXXXXXXXXXX                     XXXXXXXXXXX           E  A     +  + +MGF   Q   A+RAAF +  RA  YL+ GIPDNV           GA              G GG +     +AA     XX               G A    G  AG GN L+F+R +PQF +LR +V++NP ML  +LQ +   +P+L + I QHP+ FL+L++E  D +  A +  GA+                                               + +TEEE AA++ L+ +  G  RDQ I+A+ ACDKN E+AAN LF+
Sbjct:    3 LTFKDLKQQKFVIEAEPSELISDVKEKISKEKGWEASTQKLIYSGKILQDANTVESYKIEEKGFIVCMISKPKAAPSASTSTPSKAPSTPAPAAAXXXXXXXXXXXVASSSANVVPATPSPAGSGAAXXXXXXXXXXXGTASSGLAMGAERAA----QIAEMESMGFERSQIDLAMRAAFYNSERAIEYLLTGIPDNVQQEQRPTAPAPGAQXXXXXXXXXXXXXGDGGEEPINLFEAAAQAGAXXRGGADAARGAAGNLFGAAGVGAGAAAGLGN-LDFLRNNPQFQQLRQVVQQNPQMLEPILQQVGAGNPQLAQLIGQHPEQFLQLLSE--DGDNDAPLPPGAQA----------------------------------------------ISVTEEERAAIERLVLL--GFPRDQAIQAYFACDKNEELAANFLFD 387

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A8K1FAF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAF9_PYTOL)

HSP 1 Score: 124 bits (311), Expect = 7.410e-28
Identity = 174/459 (37.91%), Postives = 205/459 (44.66%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKR---------------RANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP-----------PDAEGQAIMEMGAEG-----------LLE--------------GMDQEDXXXXXXXXXXXXXXXXXXSFPGVGVAGREGGQGQTVT-VELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            L+VKTL+G  F I+      +  VK KI E +      Q LI  GK LKD  PL+   +    FLV+MV +                AN  A AAPA    XXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX             E +      V+ L  MGFPEDQ  AAL+AAFN+  RA  YLM GIP                                        AG A       A   + L  +R HPQFD LR LV+ NPA LP VLQ +  QSPEL+  INQ+       +NEP           PDA   A  +MG  G           LL+              GM  E                  X     G AG  GG     T + LTEEE AAV  L +M  G  R +V++A++ACDKN  +AAN L +N
Sbjct:    3 LSVKTLQGVAFTIEAEPTDTVVAVKGKIQEAQSFSIEQQKLIHAGKVLKDESPLSEYGIKENDFLVVMVTKPKAPKPAXXXXXXXXXANTPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPAVQGGAVVVGEEMN---ATVQQLCEMGFPEDQVRAALQAAFNNPDRAVEYLMNGIPQRA-------------------------------TNPPPSAGAADTAAPGXAAAAS-LEALRQHPQFDALRQLVQTNPAALPAVLQQIGGQSPELLRLINQNXXXXXXXLNEPIGTGSAPSAVAPDAGAGAPFDMGGMGGGMPSPQQIQQLLDSLSPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPEAMEXXXXSXGGAGGAGGAPPGATRIMLTEEEAAAVDRLCSM--GFDRSEVVQAYLACDKNETLAANFLMDN 424

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A813H1J7_POLGL (UV excision repair protein RAD23 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H1J7_POLGL)

HSP 1 Score: 123 bits (308), Expect = 1.040e-27
Identity = 149/439 (33.94%), Postives = 202/439 (46.01%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPG-TQVLICGGKTLKDGDPLAGS-VAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNP------LNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPD-----------------------AEGQAIMEMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXX--SFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            +T K LKGE F+++   E  + ++K KI+E +   P   Q LI  GK L D   +  S V + GF+V+MV +   P  +AAPA      XXXXXXXXXXXXXX   A                                   A A   + +  L  MGF   Q    L+AAFN+  RA  YLM GIP              G +AA    XXXXXXXXXXXXXX        A   M AG G P      L  +R HPQF +L G V +NP +L Q+L  +A   PE+++ I  HP+ F+R++ E                          A+  A++E     +L  ++Q D                    +  G G+ G  GG    + ++LTEEE+AAV+ L A+  G  ++   +A++ACDKN EMAAN LF+N
Sbjct:    2 ITFKPLKGENFQVEANPEEKIGELKKKIAEAKPEYPADAQKLIFAGKILADDATIQDSGVTSEGFVVIMVAKAKPPPGSAAPAXXXXTPXXXXXXXXXXXXXXXXXAEAQAAAGLV--------------------------AAAGMESTITQLCDMGFERPQVIRCLQAAFNNPDRAVEYLMSGIPA-------------GAEAAAAQQXXXXXXXXXXXXXXEG------AFPAMPAGGGTPEPLPPALAELRNHPQFQQLAGAVAQNPQLLAQMLPAIAQTHPEIVQAIQAHPEAFMRMLQEAGAGXXXXXXXQDPRHANMVQLAAMLAQNPAMLEQILPEMLPEIEQNDPAAAAAIRENPQILLQMIQAAAAGGGMPGGPGGSPGAMQIQLTEEENAAVERLAAL--GFDKNNAAQAYLACDKNEEMAANFLFDN 393

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Match: A0A485KDA0_9STRA (Aste57867_4066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDA0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.030e-26
Identity = 175/441 (39.68%), Postives = 214/441 (48.53%), Query Frame = 0

Query:    5 LTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGKTLKDGDPLAG-SVAAGGFLVLMVKRRANPVANAAPAPAAAXXXXXXXXXXXXXXXXEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEALAIDPTNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRDARGGGDAAXXXXXXXXXXXXXXXXXXXXXAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMNEP------------------PDAEG-------QAIM------EMGAEGLLEGMDQEDXXXXXXXXXXXXXXXXXX---SFPGVGVAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 410
            LTVKTL+G  + ID   +  +  VK K+  V G  P  Q LI  GK LKD   L+  ++    FLV+MV +    V   A  P   XXXXXXXXXXXXXXXX A AXXXXXXXXXXXXXXXXX                 EAL      +  L  MGFPE+Q   AL+AAFN+  RA  YLM GIP+   A                                  X            G  N L  +R HPQFD LR L++ NPA LP VLQ + +QSPEL+  I+Q+ + F+ ++NEP                   DA G       Q +M      +  A     GM  + XXXXXXXXXXXXX           G G A   GG G    + LTEEE AAV  L  M  G  R++VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAYSIDAELDETVESVKRKVEGVNGAAPENQKLIHAGKVLKDESKLSEYNIKENDFLVVMVTKP-KVVRKTATEP---XXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXAATATTPAVGAAGLVVGEALN---DTIRQLCDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPERPAA------------------------------PPASXXXXXXXXXXXVFGAPNSLEALRNHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHQNQEQFVAMLNEPIAESAAPAGGVPASPFGDADAGGMPTPQQLQQLMASLSPQQQAAMAAQMGMTPDXXXXXXXXXXXXXXEAMAQIMQQMQGGGAAA--GGLGAPTRIHLTEEEAAAVGRLCDM--GFDRNEVIQAYLACDKNEALAANFLMDS 402

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KET6_9PHAE	4.570e-163	87.26	UV excision repair protein RAD23 n=2 Tax=Ectocarpu...	[more]
A0A836CLA0_9STRA	1.240e-37	39.30	UV excision repair protein RAD23 n=1 Tax=Tribonema...	[more]
A0A225X0I0_9STRA	3.910e-29	40.69	UV excision repair protein RAD23 n=13 Tax=Phytopht...	[more]
A0A6G0WDE9_9STRA	1.830e-28	38.27	UV excision repair protein RAD23 n=1 Tax=Aphanomyc...	[more]
A0A1Y1XXG2_9FUNG	1.990e-28	36.89	UV excision repair protein RAD23 n=1 Tax=Basidiobo...	[more]
A0A024TCU4_9STRA	2.630e-28	35.15	UV excision repair protein RAD23 n=2 Tax=Aphanomyc...	[more]
A0A8H4RQ14_9HELO	2.710e-28	33.86	UV excision repair protein RAD23 n=1 Tax=Cudoniell...	[more]
A0A8K1FAF9_PYTOL	7.410e-28	37.91	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A813H1J7_POLGL	1.040e-27	33.94	UV excision repair protein RAD23 n=1 Tax=Polarella...	[more]
A0A485KDA0_9STRA	1.030e-26	39.68	Aste57867_4066 protein n=1 Tax=Aphanomyces stellat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 364..380 score: 35.83 coord: 273..295 score: 35.97 coord: 383..397 score: 47.27 coord: 398..412 score: 42.9
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 4..411 e-value: 7.6E-66 score: 220.8
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 3..73 e-value: 2.7E-8 score: 43.6
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 5..75 e-value: 5.6E-9 score: 35.6
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 3..78 score: 13.01
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 149..186 e-value: 1.6E-10 score: 51.0 coord: 370..409 e-value: 1.2E-4 score: 31.4
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 148..184 e-value: 1.2E-10 score: 41.0 coord: 370..407 e-value: 2.0E-9 score: 37.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 147..187 score: 13.631
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 367..410 score: 9.848
None	No IPR available	GENE3D	3.10.20.90		coord: 4..74 e-value: 9.0E-12 score: 46.5
None	No IPR available	GENE3D	1.10.8.10		coord: 361..411 e-value: 3.0E-18 score: 67.6
None	No IPR available	GENE3D	1.10.8.10		coord: 149..190 e-value: 9.4E-15 score: 56.1
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 5..409
None	No IPR available	PANTHER	PTHR10621:SF0	AT15685P-RELATED	coord: 5..409
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 237..303 e-value: 5.2E-22 score: 79.1
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 243..309
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 247..302 e-value: 2.0E-20 score: 72.3
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 360..410
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 133..190
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:1122994..1131393 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.524.1	mRNA_Ecto-sp6_S_contig10.524.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 1122991..1131611 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.524.1 ID=prot_Ecto-sp6_S_contig10.524.1|Name=mRNA_Ecto-sp6_S_contig10.524.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=413bp
MTRSLTVKTLKGEVFRIDVAEESVMSDVKTKISEVRGHDPGTQVLICGGK
TLKDGDPLAGSVAAGGFLVLMVKRRANPVANAAPAPAAAAATPAAAAAAT
PAAAAEAAAPAAAAPAAAAASAAATPAAPAAAAATPAGAGGANEALAIDP
TNVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDNVGAGSGGRD
ARGGGDAALAAAMMTGAEDEEGDEGGGGAAGLAQALMGMEAGEGNPLNFM
RFHPQFDELRGLVRENPAMLPQVLQGLATQSPELIERINQHPDDFLRLMN
EPPDAEGQAIMEMGAEGLLEGMDQEDDEEEEGGDAEAVAAGGGGSFPGVG
VAGREGGQGQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNA
EMAANLLFENAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004806	Rad23
IPR000626	Ubiquitin_dom
IPR015940	UBA
IPR036353	XPC-bd_sf
IPR015360	XPC-bd
IPR009060	UBA-like_sf
IPR029071	Ubiquitin-like_domsf