prot_Ecto-sp6_S_contig99.18857.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig99.18857.1
Unique Name	prot_Ecto-sp6_S_contig99.18857.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	279

Homology

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BLAST of mRNA_Ecto-sp6_S_contig99.18857.1 vs. uniprot
Match: D8LSX6_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSX6_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.230e-97
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0

Query:    1 MLVHQAQQSQVVAAGPASRKSLGGGCRPPPSLQREPAVALDLDNMFGEEPPSPSPRDELPAEAMKTGQWCERNSVALLEACCNRDVGKAARILGQASAEHVGEERMKNMVMLKDDFRDTALHLSACQGEVGIVKLLLARGADVHAQNNLGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASWIGNFCKKKIARLLSTEST 278
            MLVHQAQQSQVVAAGPASRKSLGGGCRPPPSLQ EPAVALDLD+MFGEEPPS SPRDELPAE MKTGQWCERNSVALLEACCNRDVGKAARILGQASAEHVGEERMKNMVMLKDDFRDTALHLSACQGEVGIVKLLLARGADVHAQNNLGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASWIGN CKKKIARLLSTEST
Sbjct:    1 MLVHQAQQSQVVAAGPASRKSLGGGCRPPPSLQLEPAVALDLDSMFGEEPPSSSPRDELPAEVMKTGQWCERNSVALLEACCNRDVGKAARILGQASAEHVGEERMKNMVMLKDDFRDTALHLSACQGEVGIVKLLLARGADVHAQNNLGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASWIGNSCKKKIARLLSTEST 278

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig99.18857.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig99.18857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
D8LSX6_ECTSI	1.230e-97	98.20	Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSX6...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 150..165 score: 41.0 coord: 198..212 score: 38.5
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 116..145 e-value: 0.0013 score: 28.0 coord: 182..211 e-value: 1.2 score: 18.2 coord: 149..178 e-value: 0.024 score: 23.8 coord: 215..244 e-value: 30.0 score: 13.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 215..247 score: 9.217
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 182..214 score: 11.327
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 149..181 score: 13.491
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 116..148 score: 12.422
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 182..275 e-value: 5.8E-21 score: 76.4
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 56..181 e-value: 1.4E-22 score: 82.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 75..258
None	No IPR available	PFAM	PF13857	Ank_5	coord: 202..256 e-value: 1.3E-8 score: 34.9
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 151..259 coord: 118..179
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 112..180 e-value: 5.3E-12 score: 46.2
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 116..256 score: 45.44

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig99	contig	Ecto-sp6_S_contig99:412379..416756 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig99.18857.1	mRNA_Ecto-sp6_S_contig99.18857.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig99 412079..418455 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18857.1 ID=prot_Ecto-sp6_S_contig99.18857.1|Name=mRNA_Ecto-sp6_S_contig99.18857.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=279bp
MLVHQAQQSQVVAAGPASRKSLGGGCRPPPSLQREPAVALDLDNMFGEEP
PSPSPRDELPAEAMKTGQWCERNSVALLEACCNRDVGKAARILGQASAEH
VGEERMKNMVMLKDDFRDTALHLSACQGEVGIVKLLLARGADVHAQNNLG
STPLNRAAVAGRTEVVELLLDAGANLEHQDDISGTSLHGAARRNHCSTVR
LLLNRGASVDAADGVGNRPLHLASAEGAISALGVLVNHYADPQVKNIRGQ
TPLDVAQASWIGNFCKKKIARLLSTEST*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom