prot_Ecto-sp6_S_contig99.18852.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18852.1
Unique Nameprot_Ecto-sp6_S_contig99.18852.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length412
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18852.1 vs. uniprot
Match: D8LSY1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY1_ECTSI)

HSP 1 Score: 734 bits (1896), Expect = 1.760e-266
Identity = 390/411 (94.89%), Postives = 393/411 (95.62%), Query Frame = 0
Query:    1 MDDVGRMFDWEDEALEERCLDIQDKEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSENQLHVRGARYLAGALHSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGGXXXXXXXXYTKKSVKEGFIEAALASYSIETFGRVPSYNERAILLSGNDIPPSDVEEMQEYASSNVELRAVAEAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREAVLAASPLTKQELLRNSPGADDIAMKVKEFADSPSSWIQSAIDAPEDFMALGEGGPDDPPLL 411
            MDDVGRMFDWEDEALEERCLDIQDKEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSGFD LCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLS+NQLHVRGARYLAGAL SNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGGXXXXXXXXYTKKSVKEGFIEAALASYSIETF            LSGNDIPPSDVEEMQ YASSNVELRAVA+APESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREAVLAASPLTKQELLRNSPGADDIA+K K F DSPSSWIQSAIDAPEDFMALGEGGPDDPPLL
Sbjct:    1 MDDVGRMFDWEDEALEERCLDIQDKEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDSLCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSDNQLHVRGARYLAGALRSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGGXXXXXXXXYTKKSVKEGFIEAALASYSIETFR-----------LSGNDIPPSDVEEMQGYASSNVELRAVADAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREAVLAASPLTKQELLRNSPGADDIAIKAKGFVDSPSSWIQSAIDAPEDFMALGEGGPDDPPLL 400          
BLAST of mRNA_Ecto-sp6_S_contig99.18852.1 vs. uniprot
Match: A0A6H5LDS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDS7_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 2.340e-154
Identity = 266/442 (60.18%), Postives = 271/442 (61.31%), Query Frame = 0
Query:    1 MDDVGRMFDWEDEALEERCLDIQDK------------------------------------------------------------------EQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSENQLHVRGARYLAGALHSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGGXXXXXXXXYTKKSVKEGFIEAALASYSIETFGRVPSYNERAILLSGNDIPPSDVEEMQEYASSNVELRAVAEAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREAVLAASPLTKQELLRNSPGADDIAMKV 376
            MDDVGRMFDWEDEALEERCLD+QDK                                                                  EQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGL+GNRYHGLNALGNT ASGKKLTHLRISGN LHSEAALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDD EAEGVASFLALS RLEKLDLSENQ                                                                                                  ER   LSGNDIPPSDVEEMQEYASSNVELRAVA+APESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTF+EEEGPMREAVLAASPLTKQELLRNSPGA+DIAMKV
Sbjct:    1 MDDVGRMFDWEDEALEERCLDLQDKNISTSDIGAFLQSLDGLHDVSSLKVVNLAGNRVGSKRESMVPIDTLLTASARSLTALNFCGNPLGEEQRYVGPLVALADTLTSLSRLKVLDLSNCTLIGLSGNRYHGLNALGNTLASGKKLTHLRISGNRLHSEAALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDDLEAEGVASFLALSVRLEKLDLSENQ--------------------------------------------------------------------------------------------------ER---LSGNDIPPSDVEEMQEYASSNVELRAVADAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFVEEEGPMREAVLAASPLTKQELLRNSPGAEDIAMKV 341          
BLAST of mRNA_Ecto-sp6_S_contig99.18852.1 vs. uniprot
Match: UPI0015D00DBA (leucine-rich repeat-containing protein 31 isoform X1 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015D00DBA)

HSP 1 Score: 73.6 bits (179), Expect = 2.170e-10
Identity = 69/202 (34.16%), Postives = 93/202 (46.04%), Query Frame = 0
Query:   33 LVALADTLTSLSRLKVLDLSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGGWLPSLPKLRYLDLSSRSG-----FDPLCGAFRTSLHLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSENQLHVRGARYLAGALHSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSNGLTGG 229
            LV L   L  L++L+V+DLS   L+G        L  L        KL  L++SG  L ++    +G  L S+P L  LDLS  +G        L   F ++  LR L L D  + + +A  V   L L   LE LDLS NQL VRG   +A  L S   L SL L   R+ +    +L   +    +L  LD+S N   GG
Sbjct:  139 LVELGTLLPFLAQLEVMDLSWNDLLG------GSLQVLAVHLQHVGKLKTLKMSGCRLTAQDLSALGEALDSVPMLEILDLSWNAGAGGGNLHYLTSHFSSASALRELHLVDCQLSEADAMSVGELLLLLPCLEVLDLSSNQLVVRGMEDVASCLGSTPHLRSLKLRMCRLDHGSLTVLGEKLKLNPALEHLDLSCNKECGG 334          
BLAST of mRNA_Ecto-sp6_S_contig99.18852.1 vs. uniprot
Match: B7G7G2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7G2_PHATC)

HSP 1 Score: 56.2 bits (134), Expect = 7.390e-5
Identity = 66/214 (30.84%), Postives = 98/214 (45.79%), Query Frame = 0
Query:   20 LDIQDKEQRYVGPLVA-LADTLTSLSRLKVLD--LSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSE-AALIVGGWLPSLPKLRYLDLSSRSGFDPLCGAFRTSL----HLRTLLLRDVGMDDGEAEGVASFLALSARLEKLDLSENQLHVRGARYLAGAL-HSNGSLSSLLLGHNRIGNEGALLLAASVPHAASLVELDVSSN 224
            L+++D E    G L+A +A   +SL  L + D  L N  LI L    Y  L+A          L+ L I  N+  S  AA ++   + SL ++  LD+S     D      RT++     LR L L D+ M D     + S L  +A L  LD+S N+L   G   +A  L  S  ++  L L +  + + G   L  S+  A SLV L ++SN
Sbjct:  254 LELRDHELTGCGGLLAHIAQQASSLEHLSLSDTGLGNGDLIELCRGLY--LHA---------SLSSLNIQNNNFCSVLAAQMLAHTISSLTRIESLDISECPWGDEGVSVLRTTIASHTSLRKLHLADIRMTDCGFVDLCSSLLNNASLGVLDVSRNRLGTSGMHAVADLLSRSKTTIYDLNLSNCHLTDHGVETLGRSLSSAKSLVRLSLASN 456          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSY1_ECTSI1.760e-26694.89Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5LDS7_9PHAE2.340e-15460.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0015D00DBA2.170e-1034.16leucine-rich repeat-containing protein 31 isoform ... [more]
B7G7G2_PHATC7.390e-530.84Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 157..184
e-value: 0.0026
score: 27.0
coord: 43..76
e-value: 7.3
score: 11.1
coord: 185..212
e-value: 0.7
score: 18.2
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 121..380
coord: 34..114
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 34..228
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 21..116
e-value: 1.0E-10
score: 42.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 117..302
e-value: 6.1E-22
score: 79.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 159..179
e-value: 1.5
score: 9.1
coord: 187..207
e-value: 0.37
score: 10.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:352494..358236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18852.1mRNA_Ecto-sp6_S_contig99.18852.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 352494..358236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18852.1 ID=prot_Ecto-sp6_S_contig99.18852.1|Name=mRNA_Ecto-sp6_S_contig99.18852.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=412bp
MDDVGRMFDWEDEALEERCLDIQDKEQRYVGPLVALADTLTSLSRLKVLD
LSNCTLIGLAGNRYHGLNALGNTFASGKKLTHLRISGNSLHSEAALIVGG
WLPSLPKLRYLDLSSRSGFDPLCGAFRTSLHLRTLLLRDVGMDDGEAEGV
ASFLALSARLEKLDLSENQLHVRGARYLAGALHSNGSLSSLLLGHNRIGN
EGALLLAASVPHAASLVELDVSSNGLTGGNNGGGGGGYTKKSVKEGFIEA
ALASYSIETFGRVPSYNERAILLSGNDIPPSDVEEMQEYASSNVELRAVA
EAPESYDLWQASEIVETCLVAKFDRLPPGVADALKKNPTFIEEEGPMREA
VLAASPLTKQELLRNSPGADDIAMKVKEFADSPSSWIQSAIDAPEDFMAL
GEGGPDDPPLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt