prot_Ecto-sp6_S_contig99.18835.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18835.1
Unique Nameprot_Ecto-sp6_S_contig99.18835.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length87
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig99.18835.1 vs. uniprot
Match: A0A6H5KDC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.530e-18
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0 
Query:   35 QVHFDEEHGVWHLVPSPVAVVVATASDKKIDSTSAGGSTRLASQQTEENLETS 87
            +VHFDEEHGVWHLVP P+AVVVATASDKKIDST AGG+TRLASQQTE+ LETS
Sbjct:   60 KVHFDEEHGVWHLVPPPIAVVVATASDKKIDSTPAGGATRLASQQTED-LETS 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDC2_9PHAE4.530e-1886.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:233968..236608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18835.1mRNA_Ecto-sp6_S_contig99.18835.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 233966..236608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18835.1 ID=prot_Ecto-sp6_S_contig99.18835.1|Name=mRNA_Ecto-sp6_S_contig99.18835.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=87bp
REEAVIPSACRHTPADVTLVDKCCVLTTASTRQLQVHFDEEHGVWHLVPS
PVAVVVATASDKKIDSTSAGGSTRLASQQTEENLETS
back to top