prot_Ecto-sp6_S_contig99.18816.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18816.1
Unique Nameprot_Ecto-sp6_S_contig99.18816.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length291
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Match: D8LPI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI0_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.960e-17
Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    1 KLSAIEKNQDGDLQNIRRNQRNTERNYKDITVAFDRIKKLESTVYTLAAPAATPKARXXXXXXXXXXXXHKAKTTHKDNASPSQQVTNA-LSDVEKKSAQLEVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSLECLLSKRLLKTVVDNILVAEGGP 173
            K+S I +NQ+ D ++I RN+R  ++NYK+I    DRI+ LE TV  LA+  A    R             K   T +   +PS  V +A L  ++K+SAQL++DR ALI+F ++N +LP  +RY W+R     +   +T  FD I D  SL+ LL     K+VVDNILV +GGP
Sbjct:    5 KISEIARNQEKDFRSIERNRRYIDKNYKEIGELLDRIRCLEDTVKKLASSHA---GRVRQVDTGMAIEEKKTPVTSR---NPS--VLDARLVKMQKRSAQLQLDRSALIKFGKMNLSLPVSERYTWKRFGNGADQTAKT--FDSICDGPSLDSLLLDPKTKSVVDNILVPDGGP 168          
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Match: UPI0000161E56 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E56)

HSP 1 Score: 87.8 bits (216), Expect = 8.990e-16
Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 0
Query:   40 LESTVYTLAAPAATPKARXXXXXXXXXXXXHKAKTTHKDNASPSQQVTNALSDVEKKSAQLEVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSLECLLSKRLLKTVVDNILVAEGGP 173
            LE TV  LA+       +             K K T +   +PS  + + L ++EK+SAQL++DR ALI+F ++N ALPE KRY W+RV  + +  ++   FD I D RSLECLL   + K+VVDNILV +GGP
Sbjct:   44 LEDTVKNLASSNPDHVRQVSTGSATKKKKTMKKKKTVRTTRNPSV-LKSKLVEMEKRSAQLQIDRSALIKFVKMNMALPESKRYTWKRVGNTADKKVKI--FDSIVDGRSLECLLLNPITKSVVDNILVPDGGP 174          
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Match: A0A6H5JX91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX91_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.370e-15
Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 0
Query:   97 SAQLEVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSLECLLSKRLLKTVVDNILVAEGGPR 174
            SAQL++DR ALI F+ +NKALP  +R+VWER LE+ +G +R  K DRI DI+SLE LL  +  + VV+NILV+ GGP+
Sbjct:   96 SAQLQMDRSALIAFSEMNKALPVTERHVWERPLENGDGSVRIQKMDRIVDIKSLEYLLRTKATRNVVNNILVSTGGPK 173          
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Match: A0A6H5KWG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.720e-14
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 0
Query:   81 SPSQQVTNA--LSDVEKKSAQLEVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSLECLLSKRLLKTVVDNILVAEGGP 173
            SP Q  TN   ++ +++ SA+L++DR ALI FN+ N ALPE +R+VWE+ L+ K+G +   + DRI D +SL+CLL     + VV+N+LV +GGP
Sbjct:  104 SPKQPSTNEEKVAHMQQLSAKLQLDRSALIAFNKKNMALPESERHVWEKRLKKKDGSVVVQRLDRIVDNKSLDCLLRNDATRAVVNNMLVDKGGP 198          
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Match: A0A6H5JHU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 7.290e-14
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   80 ASPSQQVTNAL--SDVEKKSAQLEVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSLECLLSKRLLKTVVDNILVAEGGP 173
            ++P QQ TN +  + +   SAQL++DR ALI FN+ N ALPE +R+VW++ ++ K+G +   + DRI D  SL+CLL    L+ VV+ +LV +GGP
Sbjct:  170 SAPVQQTTNEMKVAHMRSVSAQLQLDRTALIAFNKKNMALPESERHVWDKRVKRKDGSVVVQRLDRIVDNASLDCLLRNDALRAVVNGMLVGDGGP 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPI0_ECTSI1.960e-1740.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0000161E568.990e-1642.54hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JX91_9PHAE1.370e-1556.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWG7_9PHAE2.720e-1446.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHU3_9PHAE7.290e-1444.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..261
NoneNo IPR availableTMHMMTMhelixcoord: 262..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:74675..75973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18816.1mRNA_Ecto-sp6_S_contig99.18816.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 74675..75975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18816.1 ID=prot_Ecto-sp6_S_contig99.18816.1|Name=mRNA_Ecto-sp6_S_contig99.18816.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=291bp
KLSAIEKNQDGDLQNIRRNQRNTERNYKDITVAFDRIKKLESTVYTLAAP
AATPKARAAPAATPKPKDAHKAKTTHKDNASPSQQVTNALSDVEKKSAQL
EVDRRALIEFNRINKALPEDKRYVWERVLESKEGDIRTMKFDRIADIRSL
ECLLSKRLLKTVVDNILVAEGGPRSTSTPVSGRSTGCSSRTVFSPRSAPT
SRVASGPSTCGRKTPCSHLRPATGSSASSARTIRAGATSTLSPTLCGCRN
KRWRRKRKRRRVAAAAAAAAVTAAAVTMTAAAATTMKVATT
back to top