prot_Ecto-sp6_S_contig98.18788.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18788.1
Unique Nameprot_Ecto-sp6_S_contig98.18788.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length127
Homology
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BLAST of mRNA_Ecto-sp6_S_contig98.18788.1 vs. uniprot
Match: A0A6H5JQS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS9_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.770e-23
Identity = 53/82 (64.63%), Postives = 53/82 (64.63%), Query Frame = 0 
Query:    3 ESKSKVIPIFLETARLQGQRTENAPRAREHENHVTTCPGSRRPHQEAPSEAFLAVLLDLGFWTRRRDFSWRSSCPPLHHSFV 84
            ESKSKVIPI LETAR QGQRTEN                      EAPSE FL VLLDLG W RRRDFS RSSCPPLHHSFV
Sbjct:   42 ESKSKVIPILLETARHQGQRTEN----------------------EAPSEVFLVVLLDLGLWRRRRDFSCRSSCPPLHHSFV 101
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BLAST of mRNA_Ecto-sp6_S_contig98.18788.1 vs. uniprot
Match: D7FNE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE4_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.670e-7
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 MEESKSKVIPIFLETARLQGQRTENAPRA 29
            MEESKSKVIPIFLETAR QGQRTEN PRA
Sbjct:   29 MEESKSKVIPIFLETARRQGQRTENLPRA 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQS9_9PHAE5.770e-2364.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE4_ECTSI1.670e-793.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:496772..497342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18788.1mRNA_Ecto-sp6_S_contig98.18788.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 496371..497485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18788.1 ID=prot_Ecto-sp6_S_contig98.18788.1|Name=mRNA_Ecto-sp6_S_contig98.18788.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=127bp
MEESKSKVIPIFLETARLQGQRTENAPRAREHENHVTTCPGSRRPHQEAP
SEAFLAVLLDLGFWTRRRDFSWRSSCPPLHHSFVWFWGSRAISEKWKCWH
PCEALPTRVLVGKGTQKMYRARACTM*
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