prot_Ecto-sp6_S_contig98.18749.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig98.18749.1
Unique Name	prot_Ecto-sp6_S_contig98.18749.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	233

Homology

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BLAST of mRNA_Ecto-sp6_S_contig98.18749.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 7.190e-156
Identity = 227/231 (98.27%), Postives = 229/231 (99.13%), Query Frame = 0

Query:    2 STIEPKAVRSRSKSPTRSPLTRTASKTNLVINTQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEALYELVYSGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ 232
            STIEPKAVRSRSKSPTRSPL RTASKTNLVI+TQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEA YELVY+GDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ
Sbjct:    2 STIEPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ 232

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig98.18749.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig98.18749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G0W8_ECTSI	7.190e-156	98.27	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036426	Bulb-type lectin domain superfamily	GENE3D	2.90.10.10		coord: 122..227 e-value: 4.8E-5 score: 25.2
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 114..232
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..90
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..113
None	No IPR available	TMHMM	TMhelix		coord: 91..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig98	contig	Ecto-sp6_S_contig98:154030..157776 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig98.18749.1	mRNA_Ecto-sp6_S_contig98.18749.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig98 154030..157776 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18749.1 ID=prot_Ecto-sp6_S_contig98.18749.1|Name=mRNA_Ecto-sp6_S_contig98.18749.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=233bp
QSTIEPKAVRSRSKSPTRSPLTRTASKTNLVINTQAGHDAADKGEPLISP
ARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLS
VVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGC
KPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEALYELVYS
GDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036426	Bulb-type_lectin_dom_sf