prot_Ecto-sp6_S_contig97.18726.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig97.18726.1
Unique Name	prot_Ecto-sp6_S_contig97.18726.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	359

Homology

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BLAST of mRNA_Ecto-sp6_S_contig97.18726.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 6.390e-91
Identity = 223/294 (75.85%), Postives = 228/294 (77.55%), Query Frame = 0

Query:   66 GDTPHEGDPTSAXXXXXXXAPKADAKSNDNGEVASTNNXSRGSSGSTNNQDDRVRVLCRFRRTEERDGEERGSPRGKWLVFGGGXXXXXXXXXXHEGGEGAPLDTVSVRMGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAXXXXXXXXXXDVTTPSGGNAGATAPSPCHAGSAGVLPLXXXXPSSPFAGMPEAAPTNSAPVPASPPLPGYSSSVSPATLLMPXXXXXXXXXXXXGGPGTGLHPIGTVPSSDAAGAVS 359
            GD PHEGDPTSA       APKA+AKSND+ EVA    X       T+NQDDRVRVLCRFRRT ERDGEERGSPRGKWLVFGGGXXXXXXXXX HEGGEGAPLDTVSVRMGGAWS RGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTG+GKTYTMGGATATLSA   XXXXXXXXXX VTTPSGG A      PCH GSAGVLP XXXX  SPFAG PEA PTN APVPASP                 XXXXXX XXX   GPG  LHPIG +PSS AAGAVS
Sbjct:   82 GDIPHEGDPTSAPAAAD--APKAEAKSNDSVEVAXXXXXXXXXXX-TSNQDDRVRVLCRFRRTVERDGEERGSPRGKWLVFGGGXXXXXXXXX-HEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGAGKTYTMGGATATLSA---XXXXXXXXXXGVTTPSGGGAXXXXXXPCHPGSAGVLPXXXXXXXSPFAGAPEATPTNLAPVPASPXX-XXXXXXXXXXXXXXXXXXXXLXXXLPDGPGRRLHPIGIMPSSHAAGAVS 367

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BLAST of mRNA_Ecto-sp6_S_contig97.18726.1 vs. uniprot
Match: D8LL93_ECTSI (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL93_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 3.780e-70
Identity = 142/184 (77.17%), Postives = 144/184 (78.26%), Query Frame = 0

Query:  175 MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAXXXXXXXXXXDVTTPSGGNAGATAPSPCHAGSAGVLPLXXXXPSSPFAGMPEAAPTNSAPVPASPPLPGYSSSVSPATLLMPXXXXXXXXXXXXGGPGTGLHPIGTVPSSDAAGAV 358
            MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPA      XXXX   TPSGGN            SAGVLPL    PSSPFAGMPEAAPTNSAPVPASP   GYSSSVSP+TLLMPXXXXXX      GG  TGLHPI T+PSS A G V
Sbjct:    1 MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAAATPATXXXXXXXTPSGGNXXXXXXXXXXXXSAGVLPLPAPSPSSPFAGMPEAAPTNSAPVPASP---GYSSSVSPSTLLMPXXXXXXLPLQPPGGLRTGLHPIWTLPSSYALGVV 181

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig97.18726.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig97.18726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KQA5_9PHAE	6.390e-91	75.85	Kinesin motor domain-containing protein n=1 Tax=Ec...	[more]
D8LL93_ECTSI	3.780e-70	77.17	Kinesin motor domain-containing protein (Fragment)...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 116..305 e-value: 0.0065 score: -177.6
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 183..233 e-value: 8.8E-16 score: 57.7
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 118..359 score: 14.797
IPR036961	Kinesin motor domain superfamily	GENE3D	3.40.850.10		coord: 171..252 e-value: 8.9E-20 score: 72.9
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	FAMILY NOT NAMED	coord: 183..237
None	No IPR available	PANTHER	PTHR24115:SF592	CENTROMERE-ASSOCIATED PROTEIN E	coord: 183..237
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 116..236

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig97	contig	Ecto-sp6_S_contig97:499947..501832 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig97.18726.1	mRNA_Ecto-sp6_S_contig97.18726.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig97 499947..501832 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig97.18726.1 ID=prot_Ecto-sp6_S_contig97.18726.1|Name=mRNA_Ecto-sp6_S_contig97.18726.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=359bp
MVDVVASTAVAVTESSSSGSGCGGSSTVSSPSPLLPQPPLVPPPGPSPST
TPRTATAAAAAAAAAGDTPHEGDPTSAPAAAAATAPKADAKSNDNGEVAS
TNNNSRGSSGSTNNQDDRVRVLCRFRRTEERDGEERGSPRGKWLVFGGGG
GDGGGGGGGHEGGEGAPLDTVSVRMGGAWSRRGFDRVLKPGVDQAQVYSD
VKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAAATPATAA
AADVTTPSGGNAGATAPSPCHAGSAGVLPLPAPSPSSPFAGMPEAAPTNS
APVPASPPLPGYSSSVSPATLLMPPPPPPPLPPPPPGGPGTGLHPIGTVP
SSDAAGAVS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR036961	Kinesin_motor_dom_sf
IPR027640	Kinesin-like_fam
IPR027417	P-loop_NTPase