prot_Ecto-sp6_S_contig96.18662.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig96.18662.1
Unique Nameprot_Ecto-sp6_S_contig96.18662.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp6_S_contig96.18662.1 vs. uniprot
Match: A0A6H5KJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI1_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 7.050e-58
Identity = 104/126 (82.54%), Postives = 108/126 (85.71%), Query Frame = 0 
Query:    1 MSDLKKQRHHKGSGLSPGDLKSGD----GSGGLGNGLGSLPSKEAMASKGLEAKVDMATHGHQSWALTNLGAWRSQSLGASGEGKPAEFVKSRQREAKRAMLGAAAAA-----AGPGTAPTNATVV 117
            MSDLKKQRHH+G GLSPGDLK+GD    GS GLGN LGSLPSKEAMASKGLEAKVDMAT+GHQSWALTNLGAWRSQSLGASG GKPA+FVKSRQREAKRAMLG AA        GPG APTNATVV
Sbjct:    1 MSDLKKQRHHRGCGLSPGDLKTGDDSIDGSVGLGNWLGSLPSKEAMASKGLEAKVDMATYGHQSWALTNLGAWRSQSLGASGGGKPADFVKSRQREAKRAMLGTAAXXXXXXXTGPGAAPTNATVV 126
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BLAST of mRNA_Ecto-sp6_S_contig96.18662.1 vs. uniprot
Match: D7FJR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJR6_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.360e-21
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:    1 MSDLKKQRHHKGSGLSPGDLKSGD----GSGGLGNGLGSLPSKEAMASKGLEAK 50
            MSDLKKQRHHKGSGLSPGDLKSGD    GSGGLGNGLGSLPSKEAMASKGLEAK
Sbjct:    1 MSDLKKQRHHKGSGLSPGDLKSGDNSIDGSGGLGNGLGSLPSKEAMASKGLEAK 54
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJI1_9PHAE7.050e-5882.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJR6_ECTSI2.360e-2192.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:551881..553477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18662.1mRNA_Ecto-sp6_S_contig96.18662.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig96 551839..554498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18662.1 ID=prot_Ecto-sp6_S_contig96.18662.1|Name=mRNA_Ecto-sp6_S_contig96.18662.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=118bp
MSDLKKQRHHKGSGLSPGDLKSGDGSGGLGNGLGSLPSKEAMASKGLEAK
VDMATHGHQSWALTNLGAWRSQSLGASGEGKPAEFVKSRQREAKRAMLGA
AAAAAGPGTAPTNATVV*
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