prot_Ecto-sp6_S_contig96.18653.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig96.18653.1
Unique Name	prot_Ecto-sp6_S_contig96.18653.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	455

Homology

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BLAST of mRNA_Ecto-sp6_S_contig96.18653.1 vs. uniprot
Match: A0A6H5KKH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKH1_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 1.390e-155
Identity = 318/462 (68.83%), Postives = 327/462 (70.78%), Query Frame = 0

Query:    1 MDADLNPVSDDGGGS--GETAAGDIALMGAKTNELLFAQAVDPTPPNEGAVGLIFDINPLDPAVIAVVGAVVVCLVAATWWCRRKPSKTSHATTTLAADGSAGTVSAATDRPSSPVVQSRYSTRGHGVSTPGSRRLARRASSPASANRLSPPGKVMILTPQQLALCEVLYDVYNGVVPSRGIESKAVQECDLSTADIRRQFKNIKRARELDRENASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKP--PGSPRSTPVKRGAAVRPGTVGGRGSPARAAKRAA----PSSPSGRSAAPSVLPSSPPESPMRTRGRNNRTASVRVGSPKSAPTKRAXXXXXXXXXXXXXXXXXTPSKRGKPSVLEIARREAQQQTVDVASTRASSLRARRSSRSNTNTAMRRGTKS 454
            MDA LNPVSDDGGGS  G+TAAGDI LMGAK+NELLFAQA+DPTPPN  AVGLI DINPLDPAVIAVVGAVVVCLVAATW+ RRKPSKTS ATTTLA  GSAGTVSAATDR SSPV+QSRYSTRGHGV TP SRR ARRASSPASANR SPPGKV ILTPQQLALCEVLYDV+NGVVPSRGIESKAVQE DLSTADIRRQFKNI+R RELDR NASS                                                                    XXXXXXXXXXXXXXXX     P SPRSTPVKRGAA RPGT G                 PSSPSGRSAA S LPSSPPESPMRTRGRNNRTASVR+GSPKSAPTKRA                 TPSKRGKPSVLEIARRE QQQ VDVASTRASSLRARRSSRSNTNTA RRG+KS
Sbjct:    1 MDAGLNPVSDDGGGSALGQTAAGDIDLMGAKSNELLFAQAMDPTPPNGEAVGLILDINPLDPAVIAVVGAVVVCLVAATWY-RRKPSKTSRATTTLATGGSAGTVSAATDRTSSPVIQSRYSTRGHGVRTPESRRSARRASSPASANRSSPPGKVTILTPQQLALCEVLYDVFNGVVPSRGIESKAVQEFDLSTADIRRQFKNIQRERELDRGNASSSDNNGSGAPPSSPTPCPAAQSRLTRPSTRRASIAAAAADTKQQPEAGKKPSFRAKKGSRIPVPGKQTAXXXXXXXXXXXXXXXXXXXXXPVSPRSTPVKRGAAARPGTAGXXXXXXXXXXXXXXXXXPSSPSGRSAA-SDLPSSPPESPMRTRGRNNRTASVRIGSPKSAPTKRAAAAASSPRSGSGG----TPSKRGKPSVLEIARREVQQQIVDVASTRASSLRARRSSRSNTNTATRRGSKS 456

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BLAST of mRNA_Ecto-sp6_S_contig96.18653.1 vs. uniprot
Match: D7FJR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJR0_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 2.120e-141
Identity = 377/454 (83.04%), Postives = 379/454 (83.48%), Query Frame = 0

Query:    1 MDADLNPVSDDGGGSGETAAGDIALMGAKTNELLFAQAVDPTPPNEGAVGLIFDINPLDPAVIAVVGAVVVCLVAATWWCRRKPSKTSHATTTLAADGSAGTVSAATDRPSSPVVQSRYSTRGHGVSTPGSRRLARRASSPASANRLSPPGKVMILTPQQLALCEVLYDVYNGVVPSRGIESKAVQECDLSTADIRRQFKNIKRARELDRENASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPPGSPRSTPVKRGAAVRPGTVGGRGSPARAAKRAAPSSPSGRSAAPSVLPSSPPESPMRTRGRNNRTASVRVGSPKSAPTKRAXXXXXXXXXXXXXXXXXTPSKRGKPSVLEIARREAQQQTVDVASTRASSLRARRSSRSNTNTAMRRGTKS 454
            MDADLNPVSDDGGGSG+TAAGDIALMGAKTNELLFAQAVDPTPPNE AVGLIFDINPLDPAVIAVVGAVV                              GTVSAATDR SSPVVQSRYSTRGHGVS PGSRRLARRASSPASANR S PGKVMILTPQQLALCEVLYDVYNGVVPSRGIESKAVQECDLS ADIRRQFKNIKRARELDRENASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KKPP SPRSTP+KRGAA RPGTVGG                                 PMRTRGRNNRTASVRVGSPKSAPTKRAXXXXXXXXXXXXXXXXXTPSKRGKPSVLEIARREAQQQTVDVASTRASSLRARRSSRSNTN AMRRGTKS
Sbjct:    1 MDADLNPVSDDGGGSGQTAAGDIALMGAKTNELLFAQAVDPTPPNEEAVGLIFDINPLDPAVIAVVGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVSAATDRRSSPVVQSRYSTRGHGVSPPGSRRLARRASSPASANRSSRPGKVMILTPQQLALCEVLYDVYNGVVPSRGIESKAVQECDLSPADIRRQFKNIKRARELDRENASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXST-KKPPVSPRSTPIKRGAAARPGTVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMRTRGRNNRTASVRVGSPKSAPTKRAXXXXXXXXXXXXXXXXXTPSKRGKPSVLEIARREAQQQTVDVASTRASSLRARRSSRSNTNNAMRRGTKS 453

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig96.18653.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig96.18653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KKH1_9PHAE	1.390e-155	68.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJR0_ECTSI	2.120e-141	83.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23202	WASP INTERACTING PROTEIN-RELATED	coord: 9..433
None	No IPR available	PANTHER	PTHR23202:SF27	VERPROLIN 1, ISOFORM G	coord: 9..433
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..80
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 81..454
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..60
None	No IPR available	TMHMM	TMhelix		coord: 61..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig96	contig	Ecto-sp6_S_contig96:517102..519454 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig96.18653.1	mRNA_Ecto-sp6_S_contig96.18653.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig96 517102..519454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18653.1 ID=prot_Ecto-sp6_S_contig96.18653.1|Name=mRNA_Ecto-sp6_S_contig96.18653.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=455bp
MDADLNPVSDDGGGSGETAAGDIALMGAKTNELLFAQAVDPTPPNEGAVG
LIFDINPLDPAVIAVVGAVVVCLVAATWWCRRKPSKTSHATTTLAADGSA
GTVSAATDRPSSPVVQSRYSTRGHGVSTPGSRRLARRASSPASANRLSPP
GKVMILTPQQLALCEVLYDVYNGVVPSRGIESKAVQECDLSTADIRRQFK
NIKRARELDRENASSSDNNNGSGAPPSSPTPRRAAQSRLTRPSTRRASIA
AAAAADTKQQPEAGKQPSSRAKKSSRIPVPSKRAAAAAAAAAATTAPSTK
KPPGSPRSTPVKRGAAVRPGTVGGRGSPARAAKRAAPSSPSGRSAAPSVL
PSSPPESPMRTRGRNNRTASVRVGSPKSAPTKRAAAAAAAAASSPRSGGG
GTPSKRGKPSVLEIARREAQQQTVDVASTRASSLRARRSSRSNTNTAMRR
GTKS*