prot_Ecto-sp6_S_contig96.18624.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig96.18624.1
Unique Nameprot_Ecto-sp6_S_contig96.18624.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18624.1 vs. uniprot
Match: D8LH18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH18_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 3.720e-151
Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
Query:    1 MKLDSFRGGLWCLVVSASMSYVGGFVAGTSPSALTPAPHRTRALESMSEHRGVPKRRRLLYAEGXXXGQESVEPAAVLRTAVETRKAVPMTEVSEALRVLAEDGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGFTLLSRVPEKG 228
            MKLDSF GGLWCLVVSASMSYVGGFV GTSPSALTPAPHRTRALESMSEHRGVPKRRRLLYAEG XXGQESVEPAAVLRTAVETRK VPMTEVSEALRVLA DGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGF LLSRVPE+G
Sbjct:    1 MKLDSFCGGLWCLVVSASMSYVGGFV-GTSPSALTPAPHRTRALESMSEHRGVPKRRRLLYAEGGXXGQESVEPAAVLRTAVETRK-VPMTEVSEALRVLAADGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGFALLSRVPEEG 226          
BLAST of mRNA_Ecto-sp6_S_contig96.18624.1 vs. uniprot
Match: A0A836CJ46_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ46_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.960e-23
Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 0
Query:   76 AVLRTAVETRKAVPMTEVSEALRVLAEDGGSPLACGAEDVEG-SWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGP-LPIGGMRGKCWWR---GGEENELAFMLGAVKLGPFKF---GKDKNEVKTYKFFVNDGKVLAARSSAGGFTLLSRV 224
            A++  +V+TR+ +P   V +AL  L +      A   +DV+G +WELVFS+QL  GYMP+RE++ F  S  + S+  T GP +P+GG++G C W+   G +   ++F L  V LGP  F   G  +   KTY FF +   VLAARSS GG  +L +V
Sbjct:   50 ALVLESVDTRQ-IPAENVVQALESLEQKAQ---AVRQQDVDGLNWELVFSSQLSKGYMPVREVICFDISNGKISLSTTFGPGIPLGGIQGTCSWQEPEGSQPGVVSFNLSKVLLGPIAFEKPGAKEAPPKTYSFFFSGDGVLAARSSNGGVAVLKKV 202          
BLAST of mRNA_Ecto-sp6_S_contig96.18624.1 vs. uniprot
Match: A0A2V0NPG4_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPG4_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.680e-8
Identity = 55/162 (33.95%), Postives = 77/162 (47.53%), Query Frame = 0
Query:   73 EPAAVLRTAVETRKAVPMTEVSEALRVLAEDG--GSPLACGAEDVEGSWELVFSTQLKSG---YMPIRELVGFYPSREEASIDATAGPLP--IGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKD------KNEVKTYKFFVNDGKVLAARSSAGGFTLL 221
            E  ++L+TA  T+   P  E+ E   V  E      P   G + V+GSW LVFST        Y+P++E +    + +  S+++  GP    IGG      WR  E  EL F   AV +    FG          + KTY F+   G++ AARSSAGG +LL
Sbjct:   63 ECLSLLKTAATTKAVDP--EIVEGALVWLEQNTAAGPAGGGVQSVDGSWRLVFSTSTGLRFFQYIPVKEDLVIDTASKAISLESELGPFRFVIGGAISG--WRP-ESGELDFQFSAVDI--LLFGNKIWTVNPATKPKTYSFYFVGGRISAARSSAGGLSLL 217          
BLAST of mRNA_Ecto-sp6_S_contig96.18624.1 vs. uniprot
Match: A0A0D2MG47_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MG47_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 4.300e-8
Identity = 50/157 (31.85%), Postives = 76/157 (48.41%), Query Frame = 0
Query:   76 AVLRTAVETRKAVPMTEVSEALRVLAEDGGSPLACGAEDVEGSWELVFSTQLKSG---YMPIRELVGFYPSREEASIDATAGPLP--IGGMRGKCWWRGGEENELAFMLGAVKLGPF----KFGKDKNEVKTYKFFVNDGKVLAARSSAGGFTLLSR 223
            ++L+ A  T+   P  E+ E   V  E+  +  + G E ++GSW LVFST        Y+P++E +         S+++  GP    IGG      W+  +  EL F   +V +  F    K      + KTY F+   G++ AARSSAGG +LL R
Sbjct:    6 SLLKNAATTKSVSP--ELVEGALVWLEESTAGESSGVESIDGSWRLVFSTSTGLRFFQYIPVKEDLVIDSKSGAISLESELGPFRFIIGGAISA--WKPAK-GELDFQFSSVDILLFGNKIKTLSPTTKPKTYSFYFVGGRISAARSSAGGLSLLLR 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH18_ECTSI3.720e-15196.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ46_9STRA6.960e-2340.76Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2V0NPG4_9CHLO1.680e-833.95Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A0D2MG47_9CHLO4.300e-831.85Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:221250..225370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18624.1mRNA_Ecto-sp6_S_contig96.18624.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig96 220780..225370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18624.1 ID=prot_Ecto-sp6_S_contig96.18624.1|Name=mRNA_Ecto-sp6_S_contig96.18624.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=229bp
MKLDSFRGGLWCLVVSASMSYVGGFVAGTSPSALTPAPHRTRALESMSEH
RGVPKRRRLLYAEGGGGGQESVEPAAVLRTAVETRKAVPMTEVSEALRVL
AEDGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASID
ATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYK
FFVNDGKVLAARSSAGGFTLLSRVPEKG*
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