prot_Ecto-sp6_S_contig95.18593.1 (polypeptide) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 480 bits (1235), Expect = 1.520e-168 Identity = 287/325 (88.31%), Postives = 292/325 (89.85%), Query Frame = 0
Query: 1 MDGVFEEEGEGGHAEEEGVLGGRGGGIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPH--QEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAAARLSXXXXXXXXXXXXXXXXXXXXXXXXXDENLMFFNTF 323
MDGVFEEEGEGGHAEEEGVLGG IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASI R + EAW + + + AVPD SALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQY+RGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDA XXXXXXXXXXXXXXXXXXXXXXXXX ENLMFFNTF
Sbjct: 1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASI-SARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM) HSP 1 Score: 132 bits (332), Expect = 7.140e-31 Identity = 80/261 (30.65%), Postives = 141/261 (54.02%), Query Frame = 0
Query: 28 GAGATVLD-SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
G+GAT + S++W+ G + RD R+ A + + + +A ++V+ ML +SSP ER+ DE S + R E+ A +C D + MV K+ + +P +YVV+M K+V++++ + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K L
Sbjct: 310 GSGATTDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSA---RDLFEMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENKEL 564
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL) HSP 1 Score: 131 bits (330), Expect = 1.590e-30 Identity = 76/255 (29.80%), Postives = 135/255 (52.94%), Query Frame = 0
Query: 32 TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
T S++W+ G + RD R+ + + + +A ++V+ ML +SSP ER+ DE SA + R E+ + + +C D + M+ K+ + +YVV+M K+V++++ V +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K L
Sbjct: 349 TDETSLVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSA---RDLFNMESVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKEL 598
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.370e-30 Identity = 82/262 (31.30%), Postives = 136/262 (51.91%), Query Frame = 0
Query: 30 GATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXX-----SALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
GA +++W+ G D+ RD R+ A + + + +A ++V ML +SSP ER+ DE S + E + P + A+P + +C D + MV K+ D R YVV+M K+V ++R +D++G +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY L +R+V +QEVPKRAD NP T Y W++ ++ + V E + ++ +R RRK +K L
Sbjct: 368 GALAEQALVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTAR--------ELFAVPAVKSALPKDSKDTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKEL 619
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI) HSP 1 Score: 129 bits (325), Expect = 8.380e-30 Identity = 81/261 (31.03%), Postives = 140/261 (53.64%), Query Frame = 0
Query: 28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
G+GA T S++W+ G + RD R+ A + + + +A ++V ML +S+P ER+ DE SA + R E+ + A +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ V E + ++ +R RRKF +K L
Sbjct: 372 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSA---RDLFNMESVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKEL 626
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP) HSP 1 Score: 127 bits (318), Expect = 5.490e-29 Identity = 80/261 (30.65%), Postives = 138/261 (52.87%), Query Frame = 0
Query: 28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
G+GA T S++W+ G + RD R+ A + + + +A ++V ML +SSP ER+ DE S + R E+ A +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K L
Sbjct: 303 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSA---RDLFDMESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKEL 557
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: W7U6Z3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Z3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.050e-28 Identity = 85/253 (33.60%), Postives = 130/253 (51.38%), Query Frame = 0
Query: 27 IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERK--VDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRY--------GKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRK 269
+GAG D VLW++G ++FHRD R++ L V+ + + A +V+ +L +S P ER V S + G +S + +P L D +V + T Y V + ++++ +R + R+RY G ARI +LL KYLD QQV E+AM+ + RERLYR+ D +++VQE+P+RAD +PN TFYLWT QV + + + +YK LN+RLRR+
Sbjct: 409 VGAG----DEVLWRVGVEQFHRDLRHVTCLRFVRQKV--NTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGE----------LSSRVQ--LPPNVTVKMYLEVLQNDPVQIVDR---EGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQ 640
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.200e-28 Identity = 77/261 (29.50%), Postives = 138/261 (52.87%), Query Frame = 0
Query: 28 GAGATVLD--SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
G+ A +D S++W+ G + RD R+ A + + + +A ++V ML +S+P ER+ DE +SA + R E+ + + +C D + MV K+ D R YVV+M K+V++++ +D++G +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L +++V +QE+PKRAD NP TF+ W++ + + E + ++ +R RRKF +K L
Sbjct: 353 GSSAVDMDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSA---RDLFGMESVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKEL 608
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A662YGR9_9STRA (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGR9_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.390e-27 Identity = 76/252 (30.16%), Postives = 133/252 (52.78%), Query Frame = 0
Query: 36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
S++W+ G + RD R+ A + + + +A ++V ML +SSP ER+ DE S + R E+ S + +C D + MV K+ +T +P +YVV+M K+V+++R +D++G +ARI+ +L++ + L+Q+ +GE+A++P +D R RLY L +++V +QEVPKRAD NP TF+ W++ ++ V E + ++ +R RRK +K L
Sbjct: 364 SLVWRFGAAQLLRDLRHKACIKFASENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSA---RELFAMESVKSALPPESNNPWRLLLNYIMVMCRDKSGMVMKV-SQETFDPNQTRAGDGGQYVVHMQKIVEFLRQATTHAYVQDKFGVASARIVRLLVEKRQLEQKAIGELALLPSNDVRRRLYELFAEKLVKMQEVPKRADHNPALTFFCWSVDVPRMQARVAERIQDSVCRLRRRRKAEADENKEL 609
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC) HSP 1 Score: 123 bits (308), Expect = 1.470e-27 Identity = 74/251 (29.48%), Postives = 133/251 (52.99%), Query Frame = 0
Query: 36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
S++W+ G + R+ R+ A + + + +A ++V ML++SSP ER+ +E SA + R E A + +C D + M+ K+ D+ R YVV+M K+V++++ +DR+G +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RR F +K L
Sbjct: 358 SLVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSA---RDLYNMETVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKEL 603 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig95.18593.1 ID=prot_Ecto-sp6_S_contig95.18593.1|Name=mRNA_Ecto-sp6_S_contig95.18593.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=324bpback to top |