prot_Ecto-sp6_S_contig95.18593.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig95.18593.1
Unique Nameprot_Ecto-sp6_S_contig95.18593.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length324
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 1.520e-168
Identity = 287/325 (88.31%), Postives = 292/325 (89.85%), Query Frame = 0
Query:    1 MDGVFEEEGEGGHAEEEGVLGGRGGGIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPH--QEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAAARLSXXXXXXXXXXXXXXXXXXXXXXXXXDENLMFFNTF 323
            MDGVFEEEGEGGHAEEEGVLGG    IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASI   R    +  EAW + +  +  AVPD        SALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQY+RGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDA     XXXXXXXXXXXXXXXXXXXXXXXXX ENLMFFNTF
Sbjct:    1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASI-SARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM)

HSP 1 Score: 132 bits (332), Expect = 7.140e-31
Identity = 80/261 (30.65%), Postives = 141/261 (54.02%), Query Frame = 0
Query:   28 GAGATVLD-SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            G+GAT  + S++W+ G  +  RD R+ A +    +    + +A ++V+ ML +SSP ER+ DE  S  +     R     E+        A             +C D + MV K+   +  +P         +YVV+M K+V++++    +   +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K L
Sbjct:  310 GSGATTDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSA---RDLFEMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENKEL 564          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL)

HSP 1 Score: 131 bits (330), Expect = 1.590e-30
Identity = 76/255 (29.80%), Postives = 135/255 (52.94%), Query Frame = 0
Query:   32 TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            T   S++W+ G  +  RD R+   +    +    + +A ++V+ ML +SSP ER+ DE  SA +     R     E+        +           + +C D + M+ K+            +   +YVV+M K+V++++   V    +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D++V +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K L
Sbjct:  349 TDETSLVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSA---RDLFNMESVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKEL 598          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.370e-30
Identity = 82/262 (31.30%), Postives = 136/262 (51.91%), Query Frame = 0
Query:   30 GATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXX-----SALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            GA    +++W+ G D+  RD R+ A +    +    + +A ++V  ML +SSP ER+ DE  S  +           E +  P  + A+P              + +C D + MV K+     D    R      YVV+M K+V ++R        +D++G  +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY L  +R+V +QEVPKRAD NP  T Y W++   ++ + V E +  ++  +R RRK     +K L
Sbjct:  368 GALAEQALVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTAR--------ELFAVPAVKSALPKDSKDTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKEL 619          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI)

HSP 1 Score: 129 bits (325), Expect = 8.380e-30
Identity = 81/261 (31.03%), Postives = 140/261 (53.64%), Query Frame = 0
Query:   28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            G+GA T   S++W+ G  +  RD R+ A +    +    + +A ++V  ML +S+P ER+ DE  SA +     R     E+  +     A             +C D + MV K+   +  +P         +YVV+M K+V++++        +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   V E +  ++  +R RRKF    +K L
Sbjct:  372 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSA---RDLFNMESVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKEL 626          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP)

HSP 1 Score: 127 bits (318), Expect = 5.490e-29
Identity = 80/261 (30.65%), Postives = 138/261 (52.87%), Query Frame = 0
Query:   28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            G+GA T   S++W+ G  +  RD R+ A +    +    + +A ++V  ML +SSP ER+ DE  S  +     R     E+        A             +C D + MV K+   +  +P         +YVV+M K+V++++        +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  D+++ +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RRKF    +K L
Sbjct:  303 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSA---RDLFDMESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKEL 557          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: W7U6Z3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Z3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.050e-28
Identity = 85/253 (33.60%), Postives = 130/253 (51.38%), Query Frame = 0
Query:   27 IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERK--VDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYMRGNLVKCTARDRY--------GKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRK 269
            +GAG    D VLW++G ++FHRD R++  L  V+ +   +  A  +V+ +L +S P ER   V    S  +  G           +S   +  +P           L  D   +V +     T    Y V + ++++ +R   +    R+RY        G   ARI  +LL  KYLD QQV E+AM+   + RERLYR+  D +++VQE+P+RAD +PN TFYLWT    QV + + + +YK  LN+RLRR+
Sbjct:  409 VGAG----DEVLWRVGVEQFHRDLRHVTCLRFVRQKV--NTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGE----------LSSRVQ--LPPNVTVKMYLEVLQNDPVQIVDR---EGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQ 640          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.200e-28
Identity = 77/261 (29.50%), Postives = 138/261 (52.87%), Query Frame = 0
Query:   28 GAGATVLD--SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            G+ A  +D  S++W+ G  +  RD R+ A +    +    + +A ++V  ML +S+P ER+ DE +SA +     R     E+  +     +             +C D + MV K+     D    R      YVV+M K+V++++        +D++G  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L  +++V +QE+PKRAD NP  TF+ W++    +   + E +  ++  +R RRKF    +K L
Sbjct:  353 GSSAVDMDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSA---RDLFGMESVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKEL 608          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A662YGR9_9STRA (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGR9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.390e-27
Identity = 76/252 (30.16%), Postives = 133/252 (52.78%), Query Frame = 0
Query:   36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            S++W+ G  +  RD R+ A +    +    + +A ++V  ML +SSP ER+ DE  S  +     R     E+  S     +             +C D + MV K+   +T +P         +YVV+M K+V+++R        +D++G  +ARI+ +L++ + L+Q+ +GE+A++P +D R RLY L  +++V +QEVPKRAD NP  TF+ W++   ++   V E +  ++  +R RRK     +K L
Sbjct:  364 SLVWRFGAAQLLRDLRHKACIKFASENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSA---RELFAMESVKSALPPESNNPWRLLLNYIMVMCRDKSGMVMKV-SQETFDPNQTRAGDGGQYVVHMQKIVEFLRQATTHAYVQDKFGVASARIVRLLVEKRQLEQKAIGELALLPSNDVRRRLYELFAEKLVKMQEVPKRADHNPALTFFCWSVDVPRMQARVAERIQDSVCRLRRRRKAEADENKEL 609          
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC)

HSP 1 Score: 123 bits (308), Expect = 1.470e-27
Identity = 74/251 (29.48%), Postives = 133/251 (52.99%), Query Frame = 0
Query:   36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRRRTWRRFEAWMSPHQEPAVPDXXXXXXXXSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKAL 278
            S++W+ G  +  R+ R+ A +    +    + +A ++V  ML++SSP ER+ +E  SA +     R     E         A           + +C D + M+ K+     D+   R      YVV+M K+V++++        +DR+G  +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY L  D++V +QE+PKRAD NP  TF+ W++   Q+   + E +  ++  +R RR F    +K L
Sbjct:  358 SLVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSA---RDLYNMETVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKEL 603          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMS6_ECTSI1.520e-16888.31DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
H3GD40_PHYRM7.140e-3130.65DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A0P1AWK6_PLAHL1.590e-3029.80DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A5D6XL36_9STRA2.370e-3031.30DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A0W8C9C8_PHYNI8.380e-3031.03DNA-directed RNA polymerase III subunit RPC3 n=12 ... [more]
G4Z0C0_PHYSP5.490e-2930.65DNA-directed RNA polymerase III subunit RPC3 (Frag... [more]
W7U6Z3_9STRA1.050e-2833.60DNA-directed RNA polymerase III subunit RPC3 n=2 T... [more]
A0A3R7FY14_9STRA3.200e-2829.50DNA-directed RNA polymerase III subunit RPC3 n=3 T... [more]
A0A662YGR9_9STRA1.390e-2730.16DNA-directed RNA polymerase III subunit RPC3 (Frag... [more]
A0A484E8N6_BRELC1.470e-2729.48DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 289..316
IPR024550TFIIEalpha/SarR/Rpc3 HTH domainPFAMPF02002TFIIE_alphacoord: 166..259
e-value: 8.9E-8
score: 31.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 156..245
e-value: 6.7E-28
score: 98.4
IPR039748DNA-directed RNA polymerase III subunit RPC3PANTHERPTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDcoord: 35..322
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 164..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:529847..536514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18593.1mRNA_Ecto-sp6_S_contig95.18593.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig95 529847..537431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig95.18593.1 ID=prot_Ecto-sp6_S_contig95.18593.1|Name=mRNA_Ecto-sp6_S_contig95.18593.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=324bp
MDGVFEEEGEGGHAEEEGVLGGRGGGIGAGATVLDSVLWKLGFDKFHRDF
RNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASIRCGRR
RTWRRFEAWMSPHQEPAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP
RYVVNMAKMVQYMRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGE
MAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVA
QVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAAARLSNDAERERLDQVR
RSLDRLDTAVLRLDENLMFFNTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR036388WH-like_DNA-bd_sf
IPR039748RPC3
IPR036390WH_DNA-bd_sf