prot_Ecto-sp6_S_contig94.18554.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig94.18554.1
Unique Nameprot_Ecto-sp6_S_contig94.18554.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1489
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig94.18554.1 vs. uniprot
Match: D7G2Y1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y1_ECTSI)

HSP 1 Score: 503 bits (1295), Expect = 3.800e-162
Identity = 335/369 (90.79%), Postives = 339/369 (91.87%), Query Frame = 0 
Query:  625 MPNAPTKEKLKENAMPVQIRCGEDGGEGQGGAAASSSVVRAWQKRAREAESRRDVVERELCREVSRGVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPV------VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADSAQRAADMLIGRIGDARVGVLGLRIQLTAASRRAAQARLETREAERVRTARAIDSLRSEAEELRRRPRTRRVEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQVK 987
            MPNAP KE+ KENAMPVQIR GED              VRAWQKRAREAE+RRDVVERELCREVS GVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPV        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VADSAQRAADMLIGRIG+ARVGVLGLRIQLTAASRRAAQAR ETREAERVRTARAIDSLRSEAEELRRRPRTR VEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQV+
Sbjct:    1 MPNAPMKEERKENAMPVQIRSGEDXXXXXXXXXXXXXAVRAWQKRAREAEARRDVVERELCREVSWGVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADSAQRAADMLIGRIGEARVGVLGLRIQLTAASRRAAQAR-ETREAERVRTARAIDSLRSEAEELRRRPRTRGVEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQVE 368
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2Y1_ECTSI3.800e-16290.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..263
NoneNo IPR availableCOILSCoilCoilcoord: 933..960
NoneNo IPR availableCOILSCoilCoilcoord: 433..460
NoneNo IPR availableCOILSCoilCoilcoord: 332..352
NoneNo IPR availableCOILSCoilCoilcoord: 356..376
NoneNo IPR availableCOILSCoilCoilcoord: 832..852
NoneNo IPR availableCOILSCoilCoilcoord: 663..683
NoneNo IPR availableCOILSCoilCoilcoord: 1119..1139
NoneNo IPR availableCOILSCoilCoilcoord: 391..411
NoneNo IPR availableCOILSCoilCoilcoord: 894..914
NoneNo IPR availablePANTHERPTHR18947HOOK PROTEINScoord: 394..952
NoneNo IPR availablePANTHERPTHR18947:SF28GIRDIN, ISOFORM Acoord: 394..952

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig94contigEcto-sp6_S_contig94:637954..655444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig94.18554.1mRNA_Ecto-sp6_S_contig94.18554.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig94 637954..655444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig94.18554.1 ID=prot_Ecto-sp6_S_contig94.18554.1|Name=mRNA_Ecto-sp6_S_contig94.18554.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1489bp
MLANSPPADAAAAAADGLDESGRRCRVERSALRIALKVRTQEYRLLGTAH
CFRRWQVRTFFQAALDRLKRLVQQRTSCLEIVRMAYVRDVLSVKVFLLGR
QQKDTERELPLSVPPPVPEEVQRAPSADLRDVFRDVNANVDVEVVTRTEH
GVFHRAGIGPSTGMLEFPPLIETGEARVDDLSLGIYAPSSHALVIKPCDA
CLGVSTFVFRRNRRVDEALRRLDRSERLEEQAAVLTASNASLLERLLHTE
ARLEIAVEQLSEAEGSGKNGRDWLVKELARVVQETHVLQAEVLKRDEVVL
EIHGQRDREREERTLEAKSSAESFRSRLSSAHEELETVREALLQSNAETR
REASKATELENEAFSLRGTVKHLEAKLRGRGLSLAEANRWGAAAAKEAAA
LKERLRQAREEGAEKARCELEAGNRLHEANLALEVEERESRRLVTKLDEA
NATVLNLQKQAATVASNAEVQRERCQDVAGVVAAAANAVSSPPPPVPRLA
ITPITETVVAKETRSTQTTPEEDDAAQSPSVVDNGTIHGGGVVDGGRSGV
GKVRLAAKACGFGIKRGLRLASERNLAAKAAPAAPAAPAAPAVPAAPAVP
AVAKAEADPVVRGVPDEKPKSSSGMPNAPTKEKLKENAMPVQIRCGEDGG
EGQGGAAASSSVVRAWQKRAREAESRRDVVERELCREVSRGVRRADGFAS
AMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPVVGGGGGA
SAVKADEARNTRTGGESAGSNSNRKSSDDAAAAVADSAQRAADMLIGRIG
DARVGVLGLRIQLTAASRRAAQARLETREAERVRTARAIDSLRSEAEELR
RRPRTRRVEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERK
LELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREEL
RQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQVKCSVCAVRGELGAG
EDTTPTAHAPTPKVATTRSAAAAAAAAAAAAASASAAAAAAAPCFQRAGK
AWRWTEFPNNGISAAATGSRSRAENNGNSTIKNNNDDKCTVVRESGRGGN
EGGAASPTKMPREAGRSGRSKTEASRQGASKRVDNLEKRKIEIGGAGNPV
EQPEFGNDDDDDDDDDDGSCERDASAAQGSRAVDTRDRNNREAVKLRQQQ
RHHHHHYNQQHHHQQQQQHSDSSSTSGFLVHRGLGRRGNNIFAGPESSRS
ACRQQASSSASPLSLFSQPRVDALLAEDGIFPLAVEAARVQQQRFANVGR
GSSKGVTRRTQMDDERNLARSSNTKNNHSNSGSEGHQLQRRRQDVVGDGR
GGVFATAGAGSPADAQIFRQHRQHATSSTSAVTKTAEERRERPASAGQAD
RRRTSKTPALPASVTSRNANNSGRAEDDRGHDEDDGMNQSWSGCDGDGRL
VVGIGSSVESDAGRNGWIPQPVDRVKIVLHPSTNKQLW*
back to top