mRNA_Ecto-sp6_S_contig94.18554.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18554.1 vs. uniprot
Match: D7G2Y1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y1_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 3.800e-162 Identity = 335/369 (90.79%), Postives = 339/369 (91.87%), Query Frame = 1
Query: 1873 MPNAPTKEKLKENAMPVQIRCGEDGGEGQGGAAASSSVVRAWQKRAREAESRRDVVERELCREVSRGVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPV------VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADSAQRAADMLIGRIGDARVGVLGLRIQLTAASRRAAQARLETREAERVRTARAIDSLRSEAEELRRRPRTRRVEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQVK 2961
MPNAP KE+ KENAMPVQIR GED VRAWQKRAREAE+RRDVVERELCREVS GVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VADSAQRAADMLIGRIG+ARVGVLGLRIQLTAASRRAAQAR ETREAERVRTARAIDSLRSEAEELRRRPRTR VEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQV+
Sbjct: 1 MPNAPMKEERKENAMPVQIRSGEDXXXXXXXXXXXXXAVRAWQKRAREAEARRDVVERELCREVSWGVRRADGFASAMDGLRLAVDRLSGAITGGADVEVVGDDVGGEDCTGAVVTGPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADSAQRAADMLIGRIGEARVGVLGLRIQLTAASRRAAQAR-ETREAERVRTARAIDSLRSEAEELRRRPRTRGVEVQTGLKGSDVGDTEALVLALERKNKGTEAGFETFKKDAERKLELENLKAEEEALKADDHLHASHVREGNARAYCQRLEGRVAALMAHREELRQERQVLRAAVRASFKDAADKEKLRVERMRNVSTQVE 368 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18554.1 >prot_Ecto-sp6_S_contig94.18554.1 ID=prot_Ecto-sp6_S_contig94.18554.1|Name=mRNA_Ecto-sp6_S_contig94.18554.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1489bp MLANSPPADAAAAAADGLDESGRRCRVERSALRIALKVRTQEYRLLGTAHback to top mRNA from alignment at Ecto-sp6_S_contig94:637954..655444+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18554.1 ID=mRNA_Ecto-sp6_S_contig94.18554.1|Name=mRNA_Ecto-sp6_S_contig94.18554.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=17491bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:637954..655444+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:637954..655444+ >mRNA_Ecto-sp6_S_contig94.18554.1 ID=mRNA_Ecto-sp6_S_contig94.18554.1|Name=mRNA_Ecto-sp6_S_contig94.18554.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4467bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:637954..655444+ (Ectocarpus species6 EcLAC_371)back to top |