prot_Ecto-sp6_S_contig94.18552.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig94.18552.1
Unique Nameprot_Ecto-sp6_S_contig94.18552.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp6_S_contig94.18552.1 vs. uniprot
Match: D7G2Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y0_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 9.800e-35
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0 
Query:   11 GGEGNFXXXXXXXXXXXXSHACRDASVSSDCGSEKCGSEGGGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRRNNG 91
            GGEGNF  XXXXXXXXXXSHACRDASVSSDCGSEKCGSEGGGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRR+NG
Sbjct: 1009 GGEGNFAGXXXXXXXXXXSHACRDASVSSDCGSEKCGSEGGGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRRSNG 1089
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BLAST of mRNA_Ecto-sp6_S_contig94.18552.1 vs. uniprot
Match: A0A6H5K804_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K804_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.400e-27
Identity = 77/93 (82.80%), Postives = 78/93 (83.87%), Query Frame = 0 
Query:    1 MGDGGSFSDAGGEGNFXXXXXXXXXXXXS--HACRDASVSSDCGSEKCGSEGGGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRRNNG 91
            MGDGGSFSDA      XXXXXXXXXXXX   HACRDASVSSDCGSEK     GGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRR+ G
Sbjct: 1311 MGDGGSFSDAXXXXXXXXXXXXXXXXXXXXXHACRDASVSSDCGSEKXXXXSGGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRRSTG 1403
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Y0_ECTSI9.800e-3596.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K804_9PHAE1.400e-2782.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig94contigEcto-sp6_S_contig94:629186..630194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig94.18552.1mRNA_Ecto-sp6_S_contig94.18552.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig94 629186..630214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig94.18552.1 ID=prot_Ecto-sp6_S_contig94.18552.1|Name=mRNA_Ecto-sp6_S_contig94.18552.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=91bp
MGDGGSFSDAGGEGNFAGGGGSSSGGGGSHACRDASVSSDCGSEKCGSEG
GGDLKGMAFLPPSPMDRNSPGGGPGLSSAAWDSPSPRRNNG
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