prot_Ecto-sp6_S_contig93.18492.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig93.18492.1
Unique Nameprot_Ecto-sp6_S_contig93.18492.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length611
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18492.1 vs. uniprot
Match: D7FIG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG4_ECTSI)

HSP 1 Score: 1157 bits (2994), Expect = 0.000e+0
Identity = 596/607 (98.19%), Postives = 602/607 (99.18%), Query Frame = 0
Query:    1 MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLEKEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLEVVGRHRGWGASTSEVLDGVNRIIGSDKKDDYVEVVTTQTSKYRVPNKTREGAFLGSQRITAMQLYPVYDRLASTGLIFKSVVQKPATGNEEDGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLKAAAALLQATRREDRGLLGEEPERLRDLEGLHEDGAGAGXXXXXXXXXXGLGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKIIVDRVKFEMNPVYPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTATTPQPKRWAWRGRMKTFGHGEMILLPDAKTDPESLAEYAENFYAVETAVHRESTRIKAASHF 607
            MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLEKEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLEVVGRHRGWGAST+EVLDGVNRIIGSDKKDDYVEVVTTQTSKYRVPNKTREGAFLGSQRITAMQLYPVYDRLASTGLIFKSVVQKPAT NEE+GEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLKAAAALLQATRREDRGLLGEEPERLRDLEGLH+DGAGAGXXXXXXXXXXGLGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKIIVDRVKFEMNPVYPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTAT PQP+RWAWRGRMKTFGHGEM+LLPDAKTDPESLAEYAENFYAVETAVHRESTRIKA   +
Sbjct:    1 MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLEKEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLEVVGRHRGWGASTAEVLDGVNRIIGSDKKDDYVEVVTTQTSKYRVPNKTREGAFLGSQRITAMQLYPVYDRLASTGLIFKSVVQKPATDNEENGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLKAAAALLQATRREDRGLLGEEPERLRDLEGLHKDGAGAGXXXXXXXXXXGLGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKIIVDRVKFEMNPVYPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTATAPQPERWAWRGRMKTFGHGEMVLLPDAKTDPESLAEYAENFYAVETAVHRESTRIKAGERY 607          
BLAST of mRNA_Ecto-sp6_S_contig93.18492.1 vs. uniprot
Match: A0A6H5JZA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA5_9PHAE)

HSP 1 Score: 836 bits (2160), Expect = 5.990e-283
Identity = 485/725 (66.90%), Postives = 496/725 (68.41%), Query Frame = 0
Query:    1 MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLEKEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLEVVGRHRGWGASTSEVLDGVNRIIGSDKKDDYVEVVTTQTSKYRVPNKTREGAFLGSQRITAMQLYPVYDRLASTGLIFKSVVQKPATGNEEDGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLKAAAAL-------------------------------------LQATRRE-----------------------------------DRGLLGE----------------------EPERLRDLEGL-----------------------------------HEDGAGAGXXXXXXXXXXGLGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKIIVDRVKFEMNPVYPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTATTPQPKRWAWRGRMKTFGHGEMILLPDAKTDPESLAEYAENFYAVETAVHR 596
            MAMPDLQGVWETAVREVALEGSNGCTLERLWKLV+L  PSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLE+EQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLE                                                                       ASTGLIFKSVVQKPATGNEEDGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLK ++ L                                     L  ++R                                    D  LLG                        P +    +G                                      DG    XXXXXXXXXX LGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKI+VDR+KFEMNP+YPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTA  PQPKRWAWRGRMKTFGHGEMILLPDAKTDPESLAEYAENFYAVE A  R
Sbjct:    1 MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVQLHRPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKRGDPEDSRLAAIKDIPTLEQEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLE-----------------------------------------------------------------------ASTGLIFKSVVQKPATGNEEDGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEAGGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRAMDYVNSRKGRRLEWCVSLKHSSELEPPALKRPYGISLARSIMGIVKSRGEDGANVEAMQQQLHCSKRPAVKIVDLLVKNPSAYGIWKGYTREGRNAKVQALFYDEELLGRGNTKRPAATITTSAPAIKTDIPTPSKASPTQGAATPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGXXXXXXXXXXXXXXXLGDVNWSDDDELDAMVDDIGREVDEAAAAAAAKSLDKIVVDRLKFEMNPMYPPEGCSMAERLAWLQMTPKDRRKSFVLHELGLCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTAIAPQPKRWAWRGRMKTFGHGEMILLPDAKTDPESLAEYAENFYAVEAAGER 654          
BLAST of mRNA_Ecto-sp6_S_contig93.18492.1 vs. uniprot
Match: A0A7S3VKM4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKM4_DUNTE)

HSP 1 Score: 57.4 bits (137), Expect = 8.420e-5
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 0
Query:   13 AVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQQPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRE--LFLATYNDQGESNNLKRGDPEDSRLAA--------IKDIPTL-EKEQRSVGVVASRPVRLRALGLDTATLKSVTLVSPAYLQVLEVVGRHRGWGASTSEVLDGVN 179
            AV EVA+EGS+GC++  LW+L+E   P   G   +                  + VK ++W S++ +R  +  L+L +     E     +G  +DS+ A          + +P   + E+R V + AS   R   LGL  A      L  P  +  LE + R R  GA  S +   +N
Sbjct:    8 AVEEVAVEGSSGCSVSELWRLLEAKLPLPSGHVTAL----------------TDTVKQYIWVSLLQQRPLDILLYLPSGTSPHEPRPATKGKKKDSQQAQEELQETCPFESVPHYKDAEERGVRIKASTLARNNVLGLYDAHTSRFQLSGPQ-IMTLETIARARHLGALQSNLASKMN 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIG4_ECTSI0.000e+098.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZA5_9PHAE5.990e-28366.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3VKM4_DUNTE8.420e-527.53Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15180GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1coord: 13..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:557417..567689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18492.1mRNA_Ecto-sp6_S_contig93.18492.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig93 557417..567689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig93.18492.1 ID=prot_Ecto-sp6_S_contig93.18492.1|Name=mRNA_Ecto-sp6_S_contig93.18492.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=611bp
MAMPDLQGVWETAVREVALEGSNGCTLERLWKLVELDTPSQQGGSGSTPQ
QPGEEQPDDDGSDPREFVKAWLWRSIVSRRGRELFLATYNDQGESNNLKR
GDPEDSRLAAIKDIPTLEKEQRSVGVVASRPVRLRALGLDTATLKSVTLV
SPAYLQVLEVVGRHRGWGASTSEVLDGVNRIIGSDKKDDYVEVVTTQTSK
YRVPNKTREGAFLGSQRITAMQLYPVYDRLASTGLIFKSVVQKPATGNEE
DGEQKDGMFRFVVLYLKRFKDSILVPPGTKLEPTAKEVFLEMLVEHLLEA
GGSGGIVPWYNIRKDLFLDKNASGRLRNFLKKENKIPNFPIRIQLLDIRA
MDYVNSRKGRRLEWCVSLKAAAALLQATRREDRGLLGEEPERLRDLEGLH
EDGAGAGGGAAGGAAGAGLGDVNWSDDDELDAMVDDIGREVDEAAAAAAA
KSLDKIIVDRVKFEMNPVYPPEGCSMAERLAWLQMTPKDRRKSFVLHELG
LCKSIPVLKVIQLIKLLEGPGPMLQKATLDTVVAELVQEGRIKTATTPQP
KRWAWRGRMKTFGHGEMILLPDAKTDPESLAEYAENFYAVETAVHRESTR
IKAASHFSFL*
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