prot_Ecto-sp6_S_contig93.18491.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig93.18491.1
Unique Nameprot_Ecto-sp6_S_contig93.18491.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length618
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18491.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 1158 bits (2995), Expect = 0.000e+0
Identity = 585/601 (97.34%), Postives = 590/601 (98.17%), Query Frame = 0
Query:   17 KPSVVAGIDARVKATLPAGRQRSWVDIPRRREGAERKGEAASDRIRILSYNVLGARQGLADKHDHVGVDIRNWSTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFSGETLGLREDKGREGERSHSSRASEVPEAVPAAPKATRTRAGKGAAPPCDQFLRRVYGGDTGRGAKGEQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELLKMGVGKPWTPRRNRRTRGAPVVPAEHRPSGEWVSGFGDTLEDAYRDRGAVSPCFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEATPDRQEEHSPTNPPAWGEFGPIPNKLWGSDHLALGVELVLL 617
            +PSVVAGIDARVKATLPAGRQRSWVDIPRRREGAERKGEAASDRIRILSYNVLGARQGLADKHDHVGVDIRNW TRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFS ETLGLRED+GREGERSHSSRASE+PEAVPAAPKAT TRAGKGAAPPCDQFLRRVYGGDTGRGAK EQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQEL K+G GK WTPRR RRTRGAPVVPAEHRPSGEWVSGFG TLEDAYRDRGAVSP FTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPE TPDRQEEHSPT+PPAWGEFGPIPNKLWGSDHLALGVELVLL
Sbjct:   24 QPSVVAGIDARVKATLPAGRQRSWVDIPRRREGAERKGEAASDRIRILSYNVLGARQGLADKHDHVGVDIRNWPTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFSEETLGLREDRGREGERSHSSRASELPEAVPAAPKATTTRAGKGAAPPCDQFLRRVYGGDTGRGAKREQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTRGAPVVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL 624          
BLAST of mRNA_Ecto-sp6_S_contig93.18491.1 vs. uniprot
Match: L1JY19_GUITC (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY19_GUITC)

HSP 1 Score: 92.0 bits (227), Expect = 6.280e-16
Identity = 105/416 (25.24%), Postives = 154/416 (37.02%), Query Frame = 0
Query:   59 DRIRILSYNVLGARQGLADKHDHVGVDIRNWSTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKS-----------------DRPQRRH------RSRCLGVAIFYSSTHFEKMAEVRVVFSGETLGL-----REDKGREGERSHSSRASEVPEAVPAAPKATRTRA-GKGA-APPCDQFLRRVYGGDTGRGAKGEQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTF 444
            D + +LSYNVLG +Q L +KH++  +  R W  R+ +L EEI  Y         ++CLQE+T  T  +D+ PF+ +LGLD  VY PK                   RP  R          CLG A F+ S+  + +   RV+   +   L      ++    G+ S  S  +E  E+  +  +  R R  GK    PP D                          L  D+  + D A      LK       G  G+G         R   +   HLF+DP RPD+K  QC +   +     ++  V    G  K            L+L  DFNS   +   FL                                   +++   +Q   S V+ L+  G V  +HPEHP +F
Sbjct:   94 DCLSLLSYNVLGPKQALTEKHNYASLRHRKWPYRKKQLLEEIERY------NPDILCLQEITPDTFQHDFTPFLKELGLDSGVYTPKKLPVGEVMSNGKRVVKRKPRPILRPDLLGTGSHACLGTATFFRSSVLKLLKCERVLLRSKLSTLCDVLDSQEAVSNGQSSELSGETEGDESTKSLTRRARRRQRGKTRLVPPVDSLSMS---------------------LASDVRGKADTAVFTCFELK-------GKEGQGAV-------RRLGIANVHLFWDPQRPDIKLIQCALACSSFSAFMKE--VQDQHGEQKT----------PLILSGDFNSVRHLQTEFL-----------------------------------RNLSQENQEEFSAVWRLMAKGSVDASHPEHPSSF 421          
BLAST of mRNA_Ecto-sp6_S_contig93.18491.1 vs. uniprot
Match: A0A0D2MGA1_9CHLO (CCR4-NOT transcription complex subunit6 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MGA1_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 1.140e-10
Identity = 100/366 (27.32%), Postives = 150/366 (40.98%), Query Frame = 0
Query:  261 ANRHDAAA--LVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAI-DRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKR---KEQEEISRQELLKMGVG--KPWTPRRNRRTRGAPVVPAEHRPSGEWVSGFGDTLEDAYRDRGAVSPCFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRE-TTSSGEDLEQSGPEATPDRQEEHSPTNPPAWGEFGPIPNKLWGSDHLALGVELVLL 617
            A R DAAA  L+R+ ++     EEGA+          +GR       HLF+DP  PD+K  Q   L + I D L  + G  +A       + +P L      +  DFNS        LPG               + + DP             +  P  Q   S VY LL  G V PTHP+HP       + R   ++Q+ ++ ++L  +G G  +  +P+R  +  G+P      R S    +  G  L   +       P  TT+T++F G +D++F+S G       +   + FP      +G+      G  L  +G  A P      +         F P PN +W SDH+A+G EL LL
Sbjct:  124 AVRDDAAAQPLMRVLMRR----EEGAAAA--LLQHRASGRRVLAASTHLFWDPQFPDVKLVQAAALCRGIADFLETRLGPGAA-------AAVPVL------IGGDFNS--------LPG---------------VWASDPF------------NTVPPGQCLVSAVYELLVTGRVGPTHPDHPSQRSCARVARAGQQQQQALAAEQLAAVGGGLRRGPSPQRGHQRAGSPGRCPLDRLS---FNTSGLQLNSMHVQALGREPPLTTRTATFDGTLDYLFLSAGHWQVLSTLD--MPFPSQQQQGQGQHGQRPGGGGL--TGAHAVPPGSVSQA--------AFPPAPNAVWASDHVAVGAELELL 420          
BLAST of mRNA_Ecto-sp6_S_contig93.18491.1 vs. uniprot
Match: A0A2V0NSP3_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NSP3_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 1.750e-6
Identity = 90/382 (23.56%), Postives = 130/382 (34.03%), Query Frame = 0
Query:  267 AALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAI-DRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELLKMGVGKP------------------------------WTPRRNRRTRGAPVVPAEHRPSGEWVSGFGDTLEDAYRDRGAVSPCFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEATPDRQEEHSPTNPPAWGEFGPIPNKLWGSDHLALGVELVLL 617
            A LVR+     D  +EGA G          GR       HLF+DPN PD+K      L + + + L  +CG  +A             G   +V+  DFN+        LPG   +    R+                           P+     SG Y LL  G V P HP+HP       ++R      + ++      G+                                  RR R   G     +            G  LE  +       P  TT+T++F G +D++F+S G+ +    ++ VL+ P  A    G                          P++ P  G FG  PN +W SDHLA+G ELVLL
Sbjct:  137 APLVRV----VDRRDEGAVGA--LLRHRATGRRLLAASTHLFWDPNYPDVKLVHAAALCRGVAEFLDAQCGPGAA-------------GRVPVVIGGDFNT--------LPGKWASDQYDRV---------------------------PAGGCLVSGAYQLLTRGSVGPDHPDHP-------IRRS----CAGEQRAAAAAGREDGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRRCALGRHAFDSS-----------GLRLESMHVRALGAEPPLTTRTATFDGTLDYLFLSAGDWE----VAAVLSMPYAAGGGPGGGA---------------------RPPSSVPV-GAFGAAPNAVWPSDHLAVGAELVLL 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIG3_ECTSI0.000e+097.34Endo/exonuclease/phosphatase domain-containing pro... [more]
L1JY19_GUITC6.280e-1625.24Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A0D2MGA1_9CHLO1.140e-1027.32CCR4-NOT transcription complex subunit6 n=1 Tax=Mo... [more]
A0A2V0NSP3_9CHLO1.750e-623.56Endo/exonuclease/phosphatase domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 64..607
e-value: 2.5E-7
score: 30.5
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 37..615
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..617
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.799
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 57..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:551552..556777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18491.1mRNA_Ecto-sp6_S_contig93.18491.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig93 551315..556777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig93.18491.1 ID=prot_Ecto-sp6_S_contig93.18491.1|Name=mRNA_Ecto-sp6_S_contig93.18491.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=618bp
MMLLRALLFIPSVLGIKPSVVAGIDARVKATLPAGRQRSWVDIPRRREGA
ERKGEAASDRIRILSYNVLGARQGLADKHDHVGVDIRNWSTRRDRLREEI
WSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQ
RRHRSRCLGVAIFYSSTHFEKMAEVRVVFSGETLGLREDKGREGERSHSS
RASEVPEAVPAAPKATRTRAGKGAAPPCDQFLRRVYGGDTGRGAKGEQDP
ATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGGRGGGGENGRSF
TVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEI
PSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSA
PTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLK
RKEQEEISRQELLKMGVGKPWTPRRNRRTRGAPVVPAEHRPSGEWVSGFG
DTLEDAYRDRGAVSPCFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAF
PPGAHLTEGRETTSSGEDLEQSGPEATPDRQEEHSPTNPPAWGEFGPIPN
KLWGSDHLALGVELVLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf