prot_Ecto-sp6_S_contig93.18489.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig93.18489.1
Unique Name	prot_Ecto-sp6_S_contig93.18489.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	1055

Homology

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BLAST of mRNA_Ecto-sp6_S_contig93.18489.1 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 1901 bits (4924), Expect = 0.000e+0
Identity = 997/1052 (94.77%), Postives = 1008/1052 (95.82%), Query Frame = 0

Query:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVAATTRGGGRKDGRAELLVIGRQDWISTLQTCR-HFINTTDKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRRVGIFSHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECCRLRAFVALRNSAKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQKPGKGNEEEEAQRYGPGDIVGWPYLMPGPPARGRSPIVARTAASTKTPQKTAISGGADDRPNTPPEGNQQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKEKLEGPSSSSHSGGLGDEESLDGESELGGFFSGHGGYDRNAPTLFSGGRTWKDRRKTGRMYPPVARLRPSTAPELIALKTAIPSEECENRRPNTTALPGGVHALIEGISSRNNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGTHNLRRSLQSAPSSSSSPPPVIWGYARVAERGIGGHGDEAEARVGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVAPRFTSGCTMRNTGTIAQMKATTDTPGNTLSVELKASTFRPATTPYVHHAGKAHVAHPTGGIAARDEAFSGKPTLWGGWGLPSSKSGGTGSVAVAKGSDGAHGGASTSVKKLAGGAHVGFHDRRTTPAGQGGAVIAVADGPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQSRLRAE 1051
            MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFG PLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVA TTRGGGRKDGRAELLVIGRQDWISTLQTCR  F NTTDKYDASKEPD LKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGR      HVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPAREC RLRAFVALRNS KAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQ+PGKG+EEEEAQRYGPGDIVGWPYLMP PPARGRSPIVARTAA T TPQKTAI G A+D+PNTPPEGN+QERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHK+KLEGPSSSSHSGGLGDEESLDGESELG FFSGHGGYDRNAPTLFSGG TWKD+RKTGRM PPVARLRPSTAPELIALKTAI SEECE+RRPN T LPGGVHALIEGISSR+NWPRXXXXXXXXXXXRVGLTDSIADRISTAPQG HNLRRSLQSAPSSSSS PPVIWGYARVAERGIGGHGDEAEAR GRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVA  F SGCT RN GTIAQMKATTDTPGNTLSVELKASTFRPAT PYVHHAGKAHVAHPTGGIAA DEAF GKPTLWGGWGLPSSK GGTG  AVAKGSDGAHGG STS  KLAGGAHVGFHDRRT+PAGQGGAVIAVAD PATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEP ANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAK+TSQSRLRAE
Sbjct:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGR------HVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKHTSQSRLRAE 1046

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BLAST of mRNA_Ecto-sp6_S_contig93.18489.1 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 1397 bits (3615), Expect = 0.000e+0
Identity = 781/1057 (73.89%), Postives = 814/1057 (77.01%), Query Frame = 0

Query:   32 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVAATTRGGGRKDGRAELLVIGRQDWISTLQTCRH---------------------------------FINTTDKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELR--GLTVPGRRVGIFSHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECCRLRAFVALRNSAKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQKPGKGNEEEEAQRYGPGDIVGWPY----LMPGPPARGRSPIVARTAASTKTPQKTAISGGADDRPNTPPEGNQQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKEKLEGPSSSSHSGGLGDEESLDGESELGGFFSGHGGYDRNAPTLFSGGRTWKDRRKTGRMYPPVARLRPSTAPELIALKTAIPSEECENRRPNTTALPGGVHALIEGISSRNNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGTHNLRRSLQSAPSSSSSPP-PVIWGYARVAERGIGGHGDEAEARVGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVAPRFTSGCTMRNTGTIAQMKATTDTPGNTLSVELKASTFRPATTPYVHHAGKAHVAHPTGGIAARDEAFSGKPTLWGGWGLPSSKSGGTGSVAVAKGSDGAHGGASTSVKKLAGGAHVGFHDRRTTPAGQGGAVIAVADGPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQSRL 1048
            DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHE VRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPL+PDLDGDKPVEDFLEYAKTPHLEL HD GGDVAA TRGGGRKDGRAELLVIGRQDW+STL+TCRH                                 F+NTT+KYDA KEPDPLKSKARLAFNFPAKGRAGDQL+IAIKYLTERVAFCADLPLEQ+    A+I L    L    R      HV    RE                            GDLFGDEY SVAVK VLGIPFRTATVMTRTAPCELLVVPAREC RLRAFVALRNS KAMAIFDKFFINLP+GVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQ H++PG G EEEEAQRYGPGDIVGW       + G P R            TK P+  +++                                                              RYIA+THK+KL+GPSS SHSGGLGD+ESLDGESELG FFSGHGG DRNAPTLFSGG TWKD+RKTG+M PPV RLR           T IP+EECE+RRPNT A P GV AL++GISSR+NWPRXXXXXXXXXXXRVGLTDS AD ISTAPQGTH LRRSLQSAPSS      PVIWGYARVA RGI GHGDEAEAR GRCSCPMESCRVC+PLDRLERLRNTTIWTPSLPSRSTKPASAPSAVA  F SGCTMRNTGTIAQ KATTDTPGNTLS+ELK ST RP  TPYVHHAGKAHV HPTGG AA DEAF GK TLWGGWGLPSSK GGTG+  VAKG DGAHGG STS  KLA GAHVGFHDRRT+PAGQGGAVIAVAD P TAAVAPMSDFGVTNTSLGRG RREPDSGSE+SLPPAAA LPPDQPHLARLSYTLVQLSTRAALDP EPSANLCLRILGSFACEK+ATTRVSNLYRSILPPSSVSTAKYTSQSRL
Sbjct:   17 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHEFVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLDPDLDGDKPVEDFLEYAKTPHLELPHDGGGDVAAKTRGGGRKDGRAELLVIGRQDWVSTLRTCRHVTIVTFGLNTLSSVARLLLGRTFYLHKTISRSQFLNTTEKYDALKEPDPLKSKARLAFNFPAKGRAGDQLKIAIKYLTERVAFCADLPLEQMPTRLASIPLPYDSLDATSR-----FHVLCACRE----------------------------GDLFGDEYLSVAVKHVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGWEQGVQMAVEGVPKR-----------RTKQPRLGSVA--------------------------------------------------------------RYIAYTHKQKLQGPSSLSHSGGLGDDESLDGESELGEFFSGHGGCDRNAPTLFSGGGTWKDQRKTGKMSPPVTRLR-----------TVIPTEECESRRPNTAASPVGVQALLDGISSRDNWPRXXXXXXXXXXXRVGLTDSTADPISTAPQGTHKLRRSLQSAPSSXXXXXXPVIWGYARVAGRGIDGHGDEAEARGGRCSCPMESCRVCTPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTMRNTGTIAQTKATTDTPGNTLSLELKRSTSRPGLTPYVHHAGKAHVIHPTGGKAAGDEAFGGKSTLWGGWGLPSSKIGGTGNGVVAKGGDGAHGGTSTSGNKLAKGAHVGFHDRRTSPAGQGGAVIAVADAPVTAAVAPMSDFGVTNTSLGRGDRREPDSGSEISLPPAAAILPPDQPHLARLSYTLVQLSTRAALDPSEPSANLCLRILGSFACEKKATTRVSNLYRSILPPSSVSTAKYTSQSRL 956

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig93.18489.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig93.18489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIG1_ECTSI	0.000e+0	94.77	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5L5Z7_9PHAE	0.000e+0	73.89	Cyclic nucleotide-binding domain-containing protei...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 56..204 e-value: 1.1E-6 score: 30.4
None	No IPR available	PANTHER	PTHR23011	UNCHARACTERIZED	coord: 279..428
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 57..127 score: 10.059
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 57..128
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 377..463

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig93	contig	Ecto-sp6_S_contig93:533884..544927 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig93.18489.1	mRNA_Ecto-sp6_S_contig93.18489.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig93 533862..544927 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig93.18489.1 ID=prot_Ecto-sp6_S_contig93.18489.1|Name=mRNA_Ecto-sp6_S_contig93.18489.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1055bp
MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALER
LGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRG
TVLLTNNVLDREGAEGVRVLGAGQEFGHPLEPDLDGDKPVEDFLEYAKTP
HLELLHDSGGDVAATTRGGGRKDGRAELLVIGRQDWISTLQTCRHFINTT
DKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLP
LEQVAAMAAAIELRGLTVPGRRVGIFSHVFRRGRECFGEAYIMFTGTADQ
IGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLV
VPARECCRLRAFVALRNSAKAMAIFDKFFINLPRGVCSEIASLATFRTIK
MNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQKPGKGNEEEEAQRYGPG
DIVGWPYLMPGPPARGRSPIVARTAASTKTPQKTAISGGADDRPNTPPEG
NQQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRR
YIAHTHKEKLEGPSSSSHSGGLGDEESLDGESELGGFFSGHGGYDRNAPT
LFSGGRTWKDRRKTGRMYPPVARLRPSTAPELIALKTAIPSEECENRRPN
TTALPGGVHALIEGISSRNNWPRPRPSTRTRWRWRVGLTDSIADRISTAP
QGTHNLRRSLQSAPSSSSSPPPVIWGYARVAERGIGGHGDEAEARVGRCS
CPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVAPRFTSGC
TMRNTGTIAQMKATTDTPGNTLSVELKASTFRPATTPYVHHAGKAHVAHP
TGGIAARDEAFSGKPTLWGGWGLPSSKSGGTGSVAVAKGSDGAHGGASTS
VKKLAGGAHVGFHDRRTTPAGQGGAVIAVADGPATAAVAPMSDFGVTNTS
LGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPH
EPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQSRLRA
EKCV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like