prot_Ecto-sp6_S_contig93.18456.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig93.18456.1
Unique Nameprot_Ecto-sp6_S_contig93.18456.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length240
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.790e-148
Identity = 222/239 (92.89%), Postives = 223/239 (93.31%), Query Frame = 0
Query:    1 MLADMDSRAGFLRTAAAAAIGGAALVVCGESQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAVIADLLKQRRDSDAAGGTPVESVVLPGVTQDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWVQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV 239
            MLADMDSRAGFLRTAAA             SQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPA IADLLKQRRDSDAAGGTPVESVVLPGVT DGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDW QEGGAKDRLKVATDSFRLEGLIV+GVRLGAV
Sbjct:    1 MLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV 239          
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 1.600e-143
Identity = 217/239 (90.79%), Postives = 218/239 (91.21%), Query Frame = 0
Query:    1 MLADMDSRAGFLRTAAAAAIGGAALVVCGESQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAVIADLLKQRRDSDAAGGTPVESVVLPGVTQDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWVQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV 239
            MLADMDSRAGFLRTAA                PSSAAEVAATEFVDFEDSRGLFSC IPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVK FDLLTDAGLPT+GDLTKWENVGKPA IADLLKQRRDSDAAGGTPVESVVLPGVT DGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDW QEGGAKDRLKVATDSFRLEGLIVEGVRLGAV
Sbjct:   65 MLADMDSRAGFLRTAAXXXXXXXXXXXXXXXXPSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV 303          
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.710e-50
Identity = 98/188 (52.13%), Postives = 121/188 (64.36%), Query Frame = 0
Query:   47 FEDSRGLFSCRIPKNFLRAERAKDK--RGTVFVAGDYSKAEVLSVQVVKTFDLLTDAG-----LPTIGDLTKWENVGKPAVIADLLKQRRDSDAAGGTPVESVVLPG-VTQDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWVQEGGAKDRLKVATDSFRL 226
            + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  LSV ++K+  LL DAG     LPT  DLT W  VG P  IA LL  RRD DAA     +S VLP  V  DG+ L FM+K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALNT+W +   A+D L     SF L
Sbjct:   42 YSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228          
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 112 bits (280), Expect = 2.650e-26
Identity = 83/230 (36.09%), Postives = 119/230 (51.74%), Query Frame = 0
Query:   13 RTAAAAAIGGAALVVCGESQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERA-----------KDKRG-TVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAVIADLLKQRRDSDAAGGTPV-----ESVVLPGVTQDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRG-DGSFLVVWAGALNTDWVQEGGAKDRLKVATDSF 224
            R   A+ +  A  V   ++    A +V    FVD  +   LF+  +P+ F    R+           K +RG T+F AGD SKAEV++V+      LL + G   +GDL+ +E +G P  IA LL +RR+ D  G   V     +SVV   VT+DG  L+F +K  I V + +LL +E GVS L+R T  KA +   DG+ LVV+A AL+ D+    G    L+   DSF
Sbjct:   45 RAMVASTLSAAVSVAASKALAEEATDVPMKLFVDTANP-SLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSVAVLDKDSVV---VTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268          
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 5.150e-13
Identity = 59/197 (29.95%), Postives = 96/197 (48.73%), Query Frame = 0
Query:   49 DSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTD-------AGLPTIGDLTK------WENVGKPAVIADLLKQRRDSDAAGGTPVESVVLPGVTQDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVVWAGALNTDWVQEGGAKDRLKVATDSF 224
            D+   F+  IP +F+ ++R K   GT+FVAG++ +A V+SV       LL D        GLP    + +      + ++G    +A LL + RD DA+ G    ++ L  ++ DG  L+F   + + V   D LE+++GV +L R T   +++     GDG+       VW  AL  DW ++   K  L+    SF
Sbjct:   46 DAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSF 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G9G4_ECTSI1.790e-14892.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE1.600e-14390.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA1.710e-5052.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0RXZ5_THAOC2.650e-2636.09Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MYB7_9EUKA5.150e-1329.95Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..239
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..37
score: 7.975

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:129785..133084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18456.1mRNA_Ecto-sp6_S_contig93.18456.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig93 129163..133084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig93.18456.1 ID=prot_Ecto-sp6_S_contig93.18456.1|Name=mRNA_Ecto-sp6_S_contig93.18456.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=240bp
MLADMDSRAGFLRTAAAAAIGGAALVVCGESQPSSAAEVAATEFVDFEDS
RGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTD
AGLPTIGDLTKWENVGKPAVIADLLKQRRDSDAAGGTPVESVVLPGVTQD
GDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWA
GALNTDWVQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal