prot_Ecto-sp6_S_contig92.18430.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18430.1
Unique Nameprot_Ecto-sp6_S_contig92.18430.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length451
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18430.1 vs. uniprot
Match: A0A6H5JQ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ54_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 1.120e-119
Identity = 427/450 (94.89%), Postives = 430/450 (95.56%), Query Frame = 0 
Query:    1 MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGSRGALGFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLTFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKVEEGGVRWPSALERITLGSYRRSLTGVSWPPGLLALVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHLSIDSKVFNHPVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRKEECR 450
            MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGS GA GFASRVPRPTIEAISWIRASPC ALRDKLPSEAKRLTFGSNFNHT+VGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   V  STDKV+EGGVRWPS LERI LGSYRRSLTGVSWPPG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S  SIDSKVFN+PVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRKEECR
Sbjct:   41 MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGSGGAPGFASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTLVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVH-STDKVKEGGVRWPSTLERIALGSYRRSLTGVSWPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQFSIDSKVFNYPVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRKEECR 489
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BLAST of mRNA_Ecto-sp6_S_contig92.18430.1 vs. uniprot
Match: D7FU94_ECTSI (Proline dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU94_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 1.670e-85
Identity = 204/210 (97.14%), Postives = 206/210 (98.10%), Query Frame = 0 
Query:    1 MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGSRGALGFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLTFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKVEEGGVRWPSALERITLGSYRRSLTGVSWPPGLLALVLT 210
            MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEG+GS GA GFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRL FGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKV+EGGVRWPS LERITLGSYRRSLTGVSWPPGLLALVLT
Sbjct:   50 MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGEGSGGAPGFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLAFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKVKEGGVRWPSTLERITLGSYRRSLTGVSWPPGLLALVLT 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ54_9PHAE1.120e-11994.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU94_ECTSI1.670e-8597.14Proline dehydrogenase n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 136..164
e-value: 1.9E-4
score: 21.5
coord: 235..276
e-value: 6.7E-7
score: 29.4
coord: 302..343
e-value: 2.4E-4
score: 21.2
coord: 346..387
e-value: 1.7E-4
score: 21.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 64..441
e-value: 1.9E-7
score: 31.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 256..407
coord: 171..296
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 76..167
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 256..407
coord: 76..167
coord: 171..296
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 113..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:500680..502032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18430.1mRNA_Ecto-sp6_S_contig92.18430.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 500539..502759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18430.1 ID=prot_Ecto-sp6_S_contig92.18430.1|Name=mRNA_Ecto-sp6_S_contig92.18430.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=451bp
MCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGSRGAL
GFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLTFGSNFNHTVVGIR
WPEGLEEIRFGSKFSQPVAGVAWPACLQRLSFGQAFDQSLADGTFPEGLK
EISFGSKFNQSLLPVQDSTDKVEEGGVRWPSALERITLGSYRRSLTGVSW
PPGLLALVLTGEFDLPLAGIKLPGSLEVLEISSTFNHPIDEVDFPRGLKT
LTFGNQFNQAIDKVKFPAGLERLRLGLSFDQPVARVDFPARLSHLSIDSK
VFNHPVSGVSWPDFMTDLHFGDGFNQEINSAALPPRLVRLALGDRFNKPV
LGVAWPPGLRDLSFGHNFNQPVVDVVWPSSLRRLRFGARFKQCLSGTDWP
TGLETLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRKEECR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf