prot_Ecto-sp6_S_contig92.18426.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18426.1
Unique Nameprot_Ecto-sp6_S_contig92.18426.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length229
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18426.1 vs. uniprot
Match: A0A6H5L040_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L040_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.440e-96
Identity = 205/230 (89.13%), Postives = 209/230 (90.87%), Query Frame = 0 
Query:    1 MVYLSLSSSSSAVGDVAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ARWASLGFSPDGKMAGPSEAVVGFVGAAEAGSXXXXXXXXXXXXAGVLRYRMDGYRIASVTPLSGRHQVLTEQSVETTAEGSLIVRYKRPLVETFSPGRDACAATATAVGGGGTGGLETAAAGAAAEVCSGKAGGSSMEWLDPRERGVVLLWAYGTGAWPSYHDATGAFVLPRLTAVEVD 228
            M+YLSLS SSS+VGD   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ARWASLGFSPDGKMAGPSEAVVGFVGA EA SXXXXXXXXX   AGVLRYRMDGYRIASVTPLS RHQVLTEQSVETT EGSLIVR+KRPLVETFS GRDACAATA AVG  GTGGLE A AGA AEVCSG+AGGSSMEWLDPRERGVVLLWAYGTGAWPSYHDATGAFVLPRLTAVEVD
Sbjct:  153 MLYLSLSWSSSSVGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGARWASLGFSPDGKMAGPSEAVVGFVGATEAASXXXXXXXXXA--AGVLRYRMDGYRIASVTPLSDRHQVLTEQSVETTEEGSLIVRFKRPLVETFSAGRDACAATAAAVGEEGTGGLEAAVAGAVAEVCSGEAGGSSMEWLDPRERGVVLLWAYGTGAWPSYHDATGAFVLPRLTAVEVD 380
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L040_9PHAE1.440e-9689.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:469371..470370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18426.1mRNA_Ecto-sp6_S_contig92.18426.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 469212..470826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18426.1 ID=prot_Ecto-sp6_S_contig92.18426.1|Name=mRNA_Ecto-sp6_S_contig92.18426.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=229bp
MVYLSLSSSSSAVGDVAHQQQQQQQQWLSVKVVVPAASRGGGSGGGGGAR
WASLGFSPDGKMAGPSEAVVGFVGAAEAGSSSSSSSQEPPAAAGVLRYRM
DGYRIASVTPLSGRHQVLTEQSVETTAEGSLIVRYKRPLVETFSPGRDAC
AATATAVGGGGTGGLETAAAGAAAEVCSGKAGGSSMEWLDPRERGVVLLW
AYGTGAWPSYHDATGAFVLPRLTAVEVD*
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