prot_Ecto-sp6_S_contig92.18422.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18422.1
Unique Nameprot_Ecto-sp6_S_contig92.18422.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18422.1 vs. uniprot
Match: D7FPS5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS5_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 1.060e-153
Identity = 281/305 (92.13%), Postives = 285/305 (93.44%), Query Frame = 0 
Query:    1 MSRTRDLSSVCSINSSTSCCSIGSGPPLLDDAEDDTGRATSRGGGYISEDDRQSLAYSSAAPEANGDTTTRSGRASQARGSNKRNNGRVNVSRRSQRPLREVVARRAFECVVGTHGELSKVLKTTVEIDAAPKQTRDRYDQDEXXXXXXXXXXR------SYPYHDRHGRHSRVDSPGLGCRVEPVIHGEDIDIDHQASSGSFWGVDLHWCDLESLAGLPAELGDSPWALPGKGSEKDXXXXXXXXXXXXXXXSWRCIYLDASLNRLRGIDAIADEASLRDLXXXXXXXXXXXXXXXVQNLRNMQ 299
            MSRTRDLSSVCSINSSTSCCSI SGPPLLDDAEDDTGRATSRGGGYISEDDRQSLAYSSA PEANGDTTTRSGRASQARGSNKRNNGRVNVS RSQRPLREVVARRAFECVVGTHGELSKVL+ TVEIDAAPKQTRDRYDQD XXXXXXXXXX       S  +HDRHGRHSRVDSPGLGCRVEPV+HGEDIDIDHQASSGSFWGVDLHWCDLESLAGLPAELGDSPWAL GKG EKD XXXXXXXXXXXX  SWRC+YLDASLNRLRGIDAIADEASLRDL XXXXXXXXXXXXXXVQNLRNMQ
Sbjct:    1 MSRTRDLSSVCSINSSTSCCSISSGPPLLDDAEDDTGRATSRGGGYISEDDRQSLAYSSAVPEANGDTTTRSGRASQARGSNKRNNGRVNVSSRSQRPLREVVARRAFECVVGTHGELSKVLRITVEIDAAPKQTRDRYDQDXXXXXXXXXXXXXXXSDTSGQHHDRHGRHSRVDSPGLGCRVEPVLHGEDIDIDHQASSGSFWGVDLHWCDLESLAGLPAELGDSPWALSGKGGEKDDXXXXXXXXXXXXE-SWRCLYLDASLNRLRGIDAIADEASLRDLVXXXXXXXXXXXXXXVQNLRNMQ 304
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BLAST of mRNA_Ecto-sp6_S_contig92.18422.1 vs. uniprot
Match: A0A6H5KZ74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ74_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 7.110e-119
Identity = 227/282 (80.50%), Postives = 238/282 (84.40%), Query Frame = 0 
Query:    1 MSRTRDLSSVCSINSSTSCCSIGSGPPLLDDAEDDTGRATSRGGGYISEDDRQSLAYSSAAPEANGDTTTRSGRASQARGSNKRNNGRVNVSRRSQRPLREVVARRAFECVVGTHGELSKVLKTTVEIDAAPKQTRDRYDQDEXXXXXXXXXXR------SYPYHDRHGRHSRVDSPGLGCRVEPVIHGEDIDIDHQASSGSFWGVDLHWCDLESLAGLPAELGDSPWALPGKGSEKDXXXXXXXXXXXXXXXSWRCIYLDASLNRLRGIDAIADEASLRDL 276
            M+RTRDLSSVCSINSSTS CSI SGP LL+DAE DTGRATSRGGG  SE DRQ    SSAAPEA+GD T RSGRASQA GSNKR+NGRVNVSR SQRPLREVVARRAFECVVGTHG LSKVL+   E DAA  QTRDRYD   XXXXXXXXXX       S  +HDRHGRHSRVDSPGLGCRVEPV+HGEDID  HQASSGSFWGVDLHWCDLESLAGLPAELG SPWA PGKGS+K+ XXXXXXXXX     SWRC+YLDASLNRLRGIDA+ADEASLRDL
Sbjct:    1 MTRTRDLSSVCSINSSTSFCSISSGPSLLEDAEHDTGRATSRGGGNSSEYDRQ---CSSAAPEADGDVTARSGRASQAGGSNKRHNGRVNVSR-SQRPLREVVARRAFECVVGTHGGLSKVLRIIAESDAAAAQTRDRYDXXXXXXXXXXXXXXXXXSETSGQHHDRHGRHSRVDSPGLGCRVEPVLHGEDIDTYHQASSGSFWGVDLHWCDLESLAGLPAELGGSPWAPPGKGSDKEDXXXXXXXXXNEDV-SWRCLYLDASLNRLRGIDALADEASLRDL 277
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPS5_ECTSI1.060e-15392.13Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZ74_9PHAE7.110e-11980.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 275..296
score: 7.635
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:445260..447718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18422.1mRNA_Ecto-sp6_S_contig92.18422.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 445260..447718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18422.1 ID=prot_Ecto-sp6_S_contig92.18422.1|Name=mRNA_Ecto-sp6_S_contig92.18422.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=300bp
MSRTRDLSSVCSINSSTSCCSIGSGPPLLDDAEDDTGRATSRGGGYISED
DRQSLAYSSAAPEANGDTTTRSGRASQARGSNKRNNGRVNVSRRSQRPLR
EVVARRAFECVVGTHGELSKVLKTTVEIDAAPKQTRDRYDQDEPQQTETE
TETRSYPYHDRHGRHSRVDSPGLGCRVEPVIHGEDIDIDHQASSGSFWGV
DLHWCDLESLAGLPAELGDSPWALPGKGSEKDEDEDEDEDEDEDEDESWR
CIYLDASLNRLRGIDAIADEASLRDLVYLDVSYNLIRDLDAVQNLRNMQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt