prot_Ecto-sp6_S_contig92.18398.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18398.1
Unique Nameprot_Ecto-sp6_S_contig92.18398.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length407
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18398.1 vs. uniprot
Match: A0A6H5L1F7_9PHAE (MMR_HSR1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F7_9PHAE)

HSP 1 Score: 730 bits (1884), Expect = 1.220e-264
Identity = 374/406 (92.12%), Postives = 388/406 (95.57%), Query Frame = 0
Query:    1 MVDSTLGVRIALIGRNSTCKSLFLKAASSSDKPLPNTASDAEVWWTSPLAPREADLAHAPEHGFAPSGERLLPAQLNQASAASVLGEEGKQSDGDGCEQAAADAAGPGAGEATPAVLMVVGADMAFHKGYPRPNRGGVTPVKAAVSRVRERLGGGQIPLAVAVSFDVEWDGGPSQLTAMKAFLESVKDEMALEGVPIVAVSPRTELWLREQESEGGRVFYRRGDSQFRIHPAFESLMDKKEITNARAAFEVCGGTGILAAVSTAIGLDPPMLVFPVGDFITLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAGELVGAEASLVPTNSAGRGEPLPLDLDAPIGNGGWLVRLVGSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKDRRRGKS 406
            MVDSTLGVR+ALIGRNSTCKSLFLKAASSSDK LP+TASDAEVWWTSPLAPREADLAHAPEHGFAPSGERLLPAQLN AS ASVLGEE K+SDGD CEQA ADAA  GA EATPAVLMVVGA+++FHKGYPRPNRGGVTPVKAAVSRVRERLGGGQ+PLAVAVSFDVEWDGGPSQ +AMKAFL+SVKDEMALEGVP+VA+SPRTELWLREQESEGGRV YRRGDSQFRIHPAF+SLMDKKEITNARAAF+VCGGTGILAA STAIGLDPP LVFPVGDF+TLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAGELVGAEASL PTNSAGR  PLPLDLDAPIGNG WLVRL GSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKDRRRGKS
Sbjct:    1 MVDSTLGVRVALIGRNSTCKSLFLKAASSSDKLLPDTASDAEVWWTSPLAPREADLAHAPEHGFAPSGERLLPAQLNHASVASVLGEESKKSDGDRCEQAVADAARQGADEATPAVLMVVGAEISFHKGYPRPNRGGVTPVKAAVSRVRERLGGGQVPLAVAVSFDVEWDGGPSQSSAMKAFLQSVKDEMALEGVPVVAISPRTELWLREQESEGGRVSYRRGDSQFRIHPAFQSLMDKKEITNARAAFDVCGGTGILAAASTAIGLDPPTLVFPVGDFLTLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAGELVGAEASLAPTNSAGRAGPLPLDLDAPIGNGAWLVRLAGSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKDRRRGKS 406          
BLAST of mRNA_Ecto-sp6_S_contig92.18398.1 vs. uniprot
Match: A0A836CLS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.440e-25
Identity = 90/227 (39.65%), Postives = 113/227 (49.78%), Query Frame = 0
Query:  197 IVAVSPRTELWLREQESEGGRVFYRRGDSQF---RIHPAFESLMDKKEITNARAAFEVCGGTGILAAVSTAIGL-DPPM-LVFPVGDFITLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKK--EGILAGELVGAEASLVPTNSAGRGEPLP--------------LDLDAPIGNGGWLVRLVGSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKDRR 402
            + AVSP  E WL EQ+ EGGR+ +RRG   F    I PAF S++   E   A AA   CGG+GI AA+  A+GL  PP+ LV PVGD  TLQS GW G GAP A LR C  +   ++A  L  + K      L+GELV A A  V  + A                     L  +  IG G  +V +  +R+   MW               L SVQFGDLRSK+R+
Sbjct:   82 VFAVSPWLERWLAEQQ-EGGRLSHRRGSDSFVASAIKPAFASVIPAAEAWRAAAACRACGGSGIPAAIVAAVGLCSPPLTLVLPVGDLATLQSLGWEGVGAPRAALRDCLQVWPGTTAAQLCEILKSPPHERLSGELVQATALSVSWSRAAAXXXXXXXXXXXXXXXVVRQLRSNEAIGAGCHVVAIETTRRPVPMWQGEXXXXXXXXXXAKLPSVQFGDLRSKNRK 307          
BLAST of mRNA_Ecto-sp6_S_contig92.18398.1 vs. uniprot
Match: A0A7S3R6V4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R6V4_DUNTE)

HSP 1 Score: 63.2 bits (152), Expect = 5.770e-7
Identity = 62/206 (30.10%), Postives = 93/206 (45.15%), Query Frame = 0
Query:  191 ALEGVPIVAVSPRTELWLREQESEGGRVFYRRGDSQFRIHPAFESLMDKKEITNA-RAAFEVCGGTGILAAVSTAIGLDPPMLVFPVGDFIT--------LQSSGWC---GDGAPV------ATLRTCRLMRRNSSARDLFAVEKKEG--ILAGELVGAEASLVPTNSAGR----GEPLP-----LDLDAPIGNGGWLVRLVGSRK 367
            AL   P VA+S  +E WL     +G +V Y+       + P  +     +++    R      GGTG L AVSTA+ + PP +VFPVGD  T        + + G     G+ A          LR   LM+  S+  DLF+V  +    +L GE V AEA ++   S+G     G+P       L  D  +G    +VR++ ++K
Sbjct:  881 ALPQEPAVAMSAASERWLATTARKG-QVVYQDAAPSASVAPGCDDASVARQVAELNRRVLGPFGGTGALLAVSTAVAMRPPAVVFPVGDLNTCTALPARTIATGGGLLLGGEDAKARAAEGPTVLRDAVLMKPGSTPADLFSVLVRPPWQLLEGEFVRAEARVLQCGSSGHQGTHGKPSSASRTVLKKDDTLGFSNCVVRIMVNKK 1085          
BLAST of mRNA_Ecto-sp6_S_contig92.18398.1 vs. uniprot
Match: A0A061S841_9CHLO (MMR_HSR1_C domain-containing protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S841_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 9.260e-5
Identity = 53/180 (29.44%), Postives = 77/180 (42.78%), Query Frame = 0
Query:  183 LESVKDEMALEGVPIVAVSPRTELWLREQESEGGRVFYRRGDSQFRIHPAFESLMDK-KEITNARAAFEVCGGTGILAAVSTAIGLDPPMLVFPVGD---FITLQSSGWCGDGAPVA----------------------TLRTCRLMRRNSSARDLFAVEKKEG--ILAGELVGAEASLV 334
            +E VK    L G   + VS ++E WL +    G  V Y  G S  +      ++ D  K I +      + G TG+LAA++ A+ L PP++VFPV D   F  L    +  D    A                        +   LM+  S+  DL+ V KKE   +L+GE V AE  +V
Sbjct:  180 IEYVKQN--LPGAVSIPVSAKSEWWLCKARHRG-EVLYTPGSSHMQPATEDSTIRDTCKSIWDH--VMNIHGSTGVLAAITAAVRLRPPIVVFPVRDLKTFAPLSKKNYVSDSVTRAENEIMHVNKKEMPAIEHQSSSHVFQDVILMKPASTVNDLYMVLKKEPYRLLSGEFVRAECRVV 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L1F7_9PHAE1.220e-26492.12MMR_HSR1_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CLS2_9STRA2.440e-2539.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3R6V4_DUNTE5.770e-730.10Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A061S841_9CHLO9.260e-529.44MMR_HSR1_C domain-containing protein (Fragment) n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013646Uncharacterised GTP-binding protein, C-terminalPFAMPF08438MMR_HSR1_Ccoord: 190..278
e-value: 6.4E-8
score: 33.1
NoneNo IPR availablePANTHERPTHR23305:SF1coord: 194..334
NoneNo IPR availablePANTHERPTHR23305GTP-BINDING PROTEIN-RELATEDcoord: 194..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:198010..199643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18398.1mRNA_Ecto-sp6_S_contig92.18398.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 197722..199643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18398.1 ID=prot_Ecto-sp6_S_contig92.18398.1|Name=mRNA_Ecto-sp6_S_contig92.18398.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=407bp
MVDSTLGVRIALIGRNSTCKSLFLKAASSSDKPLPNTASDAEVWWTSPLA
PREADLAHAPEHGFAPSGERLLPAQLNQASAASVLGEEGKQSDGDGCEQA
AADAAGPGAGEATPAVLMVVGADMAFHKGYPRPNRGGVTPVKAAVSRVRE
RLGGGQIPLAVAVSFDVEWDGGPSQLTAMKAFLESVKDEMALEGVPIVAV
SPRTELWLREQESEGGRVFYRRGDSQFRIHPAFESLMDKKEITNARAAFE
VCGGTGILAAVSTAIGLDPPMLVFPVGDFITLQSSGWCGDGAPVATLRTC
RLMRRNSSARDLFAVEKKEGILAGELVGAEASLVPTNSAGRGEPLPLDLD
APIGNGGWLVRLVGSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKD
RRRGKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013646MMR_HSR1_C