prot_Ecto-sp6_S_contig90.18335.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig90.18335.1
Unique Nameprot_Ecto-sp6_S_contig90.18335.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length91
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.810e-25
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 0
Query:    1 MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTI 85
            MIKVI RMTTTLLKFGFVMVVVM GFAMA HVL+ D DSF  TFL LF+AMLG+VDFF   A  +YD  SVAT+L VVYLFVVT+
Sbjct:  527 MIKVISRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYD--SVATILFVVYLFVVTV 609          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.160e-23
Identity = 59/91 (64.84%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    1 MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            M++VIFRMT TLL+FG VM+VVMIGF MALHV++ DV+ F  T L LFKAMLG+  FF+E +  +YD   VAT+L+VVYLF+VT+MLLNLL
Sbjct:  864 MVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDP--VATILVVVYLFIVTVMLLNLL 952          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.140e-23
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    4 VIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            VIFRMTT LLKFGFVM VVMIGF MA HVL+ D DSF  +FL LFKAM G+  FFN  + D YD  +VAT+LLVVYL +VTI+LLNLL
Sbjct:  688 VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYD--AVATMLLVVYLSIVTILLLNLL 773          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.150e-23
Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    3 KVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            +V+FRMT  LLKFGFVM V+++GF MA HVL+ D DSF  +FL LFKAMLGD DFF   + D YD   VAT LLVVYLF+VT+MLLNLL
Sbjct:  879 RVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDV--VATFLLVVYLFIVTVMLLNLL 965          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.850e-21
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    1 MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            M++VIFRMT TLL+FG VM+VVMIGF MALHV + DV  F  T L LFKAMLG+   F+E +  +YD   VAT+L+VVYL +VT+MLLNLL
Sbjct:  881 MVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDP--VATILVVVYLCIVTVMLLNLL 969          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.090e-20
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            MI+V+F MT  L+KFG V++VVM+GFAM+ H L+ DVD+F  T L LFKAMLG+VDFF     +QYD  SVAT L V+YL V+ +MLLNLL
Sbjct:  926 MIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYD--SVATALFVIYLVVIAVMLLNLL 1014          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.320e-20
Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    3 KVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
             V+FRMT  LLKFGFVM V+++GF MA HV + D DSF  +FL LFKAMLGD DFF   + D YD   VAT LLVV LF+VT+MLLNLL
Sbjct:  153 SVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDF--VATFLLVVGLFIVTVMLLNLL 239          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.900e-12
Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    4 VIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFF 58
            VIF MT  L++FG VM+VVM+GFAM+LHVL  D  SF  TF+ALFKA LGDVD+F
Sbjct:  316 VIFAMTAQLVRFGIVMLVVMVGFAMSLHVLIRDSKSFGETFVALFKATLGDVDYF 370          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.260e-11
Identity = 41/91 (45.05%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    1 MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            MI+V+F MT  L KFG +M++VM+GF  + + LY +  ++   + A+F+A LG+ D+ ++ +   +D   VATVLLVVYL ++TIM+LNLL
Sbjct: 1244 MIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDG--VATVLLVVYLVLLTIMMLNLL 1332          
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.720e-11
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 0
Query:    2 IKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKAMLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL 91
            I+V+F MT  L KFG +M++VM+GF  + + LY +  ++   + A+F+A LG+ D+F++ +   +D   VAT LLVVYL ++TIM+LNLL
Sbjct: 1000 IQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDDFSGTTFDG--VATALLVVYLVLLTIMMLNLL 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G6K7_ECTSI1.810e-2574.12Transient Receptor Potential Channel. C terminally... [more]
D7FZR6_ECTSI1.160e-2364.84Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JG42_9PHAE2.140e-2369.32Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJG3_9PHAE2.150e-2366.29Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KBU4_9PHAE5.850e-2162.64Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FLB1_ECTSI1.090e-2060.44Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JUV2_9PHAE1.320e-2064.04Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE8.900e-1267.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LDE6_9PHAE1.260e-1145.05Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LT30_ECTSI1.720e-1144.44Ankyrin Repeat Transient Receptor Potential Channe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 2..91
e-value: 2.2E-6
score: 27.1
IPR024862Transient receptor potential cation channel subfamily VPANTHERPTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINcoord: 2..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..91
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 71..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:322359..322957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18335.1mRNA_Ecto-sp6_S_contig90.18335.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig90 322359..322977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig90.18335.1 ID=prot_Ecto-sp6_S_contig90.18335.1|Name=mRNA_Ecto-sp6_S_contig90.18335.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=91bp
MIKVIFRMTTTLLKFGFVMVVVMIGFAMALHVLYHDVDSFCTTFLALFKA
MLGDVDFFNEIATDQYDNDSVATVLLVVYLFVVTIMLLNLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR024862TRPV