prot_Ecto-sp6_S_contig90.18326.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig90.18326.1
Unique Nameprot_Ecto-sp6_S_contig90.18326.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 4.130e-36
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGR DSVAT+LFVVY  VVTV
Sbjct:  534 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV 609          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.570e-23
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MTT LLKFGFVM VVM GF MAFHVLFRDFDSFG +FL LF+AM GE  FF  F+G   D+VATML VVY  +VT+
Sbjct:  692 MTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTI 767          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.390e-22
Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT  LLKFGFVM V++ GF MAFHVLFRDFDSFG +FL LF+AMLG+ DFF+ F+G   D VAT L VVY  +VTV
Sbjct:  884 MTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTV 959          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.680e-21
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT TLL+FG VM+VVM GF MA HV+FRD + FG T LGLF+AMLGE  FF+ F+GGR D VAT+L VVY  +VTV
Sbjct:  871 MTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTV 946          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 4.780e-20
Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT  LLKFGFVM V++ GF MAFHV FRDFDSFG +FL LF+AMLG+ DFF+ F+G   D VAT L VV   +VTV
Sbjct:  158 MTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTV 233          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.180e-20
Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT  L+KFG V++VVM GFAM+FH LF D D+FG T L LF+AMLGEVDFF +F G + DSVAT LFV+Y +V+ V
Sbjct:  933 MTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAV 1008          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.290e-11
Identity = 33/76 (43.42%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT  L KFG +M++VM GF  +F+ L+++  ++G+ +  +FRA LGE D+F+ F+G   D VAT L VVY +++T+
Sbjct: 1006 MTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTI 1081          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.150e-10
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRNDSVATMLFVVYRLVVTV 76
            MT  L KFG +M++VM GF  +F+ L+++  ++G  +  +FRA LGE D+ + F+G   D VAT+L VVY +++T+
Sbjct: 1251 MTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTI 1326          
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.090e-10
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFF 51
            MT  L++FG VM+VVM GFAM+ HVL RD  SFG TF+ LF+A LG+VD+F
Sbjct:  320 MTAQLVRFGIVMLVVMVGFAMSLHVLIRDSKSFGETFVALFKATLGDVDYF 370          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G6K7_ECTSI4.130e-3694.74Transient Receptor Potential Channel. C terminally... [more]
A0A6H5JG42_9PHAE1.570e-2369.74Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJG3_9PHAE1.390e-2267.11Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
D7FZR6_ECTSI1.680e-2165.79Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JUV2_9PHAE4.780e-2064.47Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
D7FLB1_ECTSI5.180e-2063.16Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LT30_ECTSI1.290e-1143.42Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5LDE6_9PHAE1.150e-1042.11Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE2.090e-1062.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024862Transient receptor potential cation channel subfamily VPANTHERPTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINcoord: 2..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:148760..148987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18326.1mRNA_Ecto-sp6_S_contig90.18326.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig90 148748..148987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig90.18326.1 ID=prot_Ecto-sp6_S_contig90.18326.1|Name=mRNA_Ecto-sp6_S_contig90.18326.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=76bp
MTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDF
FETFAGGRNDSVATMLFVVYRLVVTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024862TRPV