prot_Ecto-sp6_S_contig9.18315.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18315.1
Unique Nameprot_Ecto-sp6_S_contig9.18315.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length275
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 4.910e-181
Identity = 269/273 (98.53%), Postives = 269/273 (98.53%), Query Frame = 0
Query:    1 MPRGGGGAGSSSGSKGAAPLGKQDAFNEAQTAMMAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATARTAKAXXXXXXXXDSSSEPARKKTK 273
            MPRGGGGAGSSSGSKGAAPLGKQDAFNEAQTAM AQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATARTA A XXXXXXX SSSEPARKKTK
Sbjct:   85 MPRGGGGAGSSSGSKGAAPLGKQDAFNEAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATARTANAAXXXXXXXXSSSEPARKKTK 357          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A1D2AC59_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AC59_AUXPR)

HSP 1 Score: 196 bits (498), Expect = 7.290e-59
Identity = 101/189 (53.44%), Postives = 134/189 (70.90%), Query Frame = 0
Query:   53 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVL 241
            NV AT +++C +DLK + +RARNAEYNPKRF+A I+R+    EPK+TAL+F +GK+V TG++S      A + +ARIL KL+N            + ++ ++QNMV + DV FPIRLEGL AS+   FC+YEPELFPGLIYRM DPKI  LIFVSGKVVLTGAK  +++   F+ +YP L +FKK  +L
Sbjct:   28 NVVATVNLECKLDLKDIALRARNAEYNPKRFAAVIMRI---REPKSTALIFASGKMVCTGAKSEQESRLAARKYARILQKLENPV----------IFKEFKIQNMVGSCDVRFPIRLEGL-ASSHSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKRREEIYQAFENIYPVLKEFKKGGLL 202          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A2P6VMN0_9CHLO (TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2511126 RepID=A0A2P6VMN0_9CHLO)

HSP 1 Score: 192 bits (487), Expect = 3.750e-57
Identity = 99/189 (52.38%), Postives = 133/189 (70.37%), Query Frame = 0
Query:   53 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVL 241
            NV AT +++C +DLK + + ARNAEYNPKRF+A I+R+    EPK+TAL+F +GK+V TG++S A    A + +A+IL KL       S+ ++F   ++ ++QNMV + DV FPIRLEGL AS    FC+YEPELFPGLIYRM DPKI  LIFVSGKVVLTGAK  + +   F+ +YP L  F+K  ++
Sbjct:   32 NVVATVNLECKLDLKNIALHARNAEYNPKRFAAVIMRI---REPKSTALIFHSGKMVCTGTKSEAEARTASRKYAKILQKL-------SYSVSF---KEFKIQNMVGSCDVKFPIRLEGL-ASTHAMFCSYEPELFPGLIYRMADPKIVLLIFVSGKVVLTGAKKREDIYRAFESIYPVLQTFRKGGMI 206          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A5J4XYK7_9CHLO (TATA-box-binding 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XYK7_9CHLO)

HSP 1 Score: 193 bits (490), Expect = 6.630e-57
Identity = 102/202 (50.50%), Postives = 139/202 (68.81%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATARTA 251
            ++ N+ AT ++ C +DLKT+ ++ARNAEYNPKRF+A IIR+    EPK TALVF +GK+VVTG++S  + + A K FA+I+ + D          +    +D ++QN+V + DV FPIRLEGL  ++ G F +YEPELFPGLIYRMK PKI  LIFVSGKVVLTGAK  +++   F+++YPTL  F+K  V  Q S   + A
Sbjct:   39 TLQNIVATVNLSCKLDLKTIALKARNAEYNPKRFAAVIIRI---REPKTTALVFASGKMVVTGAKSEKNSETAAKKFAKIVKQCDFPDVKFQASADLLAHQDFKLQNIVGSCDVKFPIRLEGLAYAH-GLFSSYEPELFPGLIYRMKVPKIVLLIFVSGKVVLTGAKFKEEIYQAFEQIYPTLGIFRKGDVPPQGSGAPQAA 236          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A2G2YW92_CAPAN (TATA-box-binding protein n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2YW92_CAPAN)

HSP 1 Score: 189 bits (479), Expect = 1.480e-56
Identity = 94/191 (49.21%), Postives = 132/191 (69.11%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATV 240
            ++ N+ +T ++ C +DLK + ++A+NAEYNPKRF A I+R+    EPK TAL+F TGKVVVTG+++     YA + +ARI+ K+    G     + F   +D ++QN+VA+ DVGFPIRLEGL  ++ G F +YEPE+FPGLIYRMK PKI  L+F SGK+V+TGAK  + +   F  +YP L QF K T+
Sbjct:   12 TLQNIASTVNLDCKLDLKGIALQAQNAEYNPKRFPAVIMRV---KEPKTTALIFATGKVVVTGAKNEGDAKYAARKYARIVQKIGCHLG-----VKF---KDFKIQNIVASCDVGFPIRLEGLALAH-GAFSSYEPEIFPGLIYRMKQPKIVMLVFTSGKIVITGAKVREDIYTAFDSIYPVLTQFSKKTL 190          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A7J7ISE2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISE2_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 2.470e-56
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 0
Query:   48 KLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKA 238
            ++ + NV AT ++ C +DL+ + MRARNAEYNPKRF+A I+R+    +PK TAL+F TGKVV+TG+RS      A + +A+I+ KL          + F    D  + N+VA+ DV FPIRLE L  ++   + +YEPELFPGL+YRM +PK+  LIFVSGKVV+TGAKS   L D F+K+YP LCQF+KA
Sbjct:   40 EVKLQNVVATVNLVCPLDLRHIAMRARNAEYNPKRFAAVIMRI---RDPKTTALIFSTGKVVITGARSEEDARLAARKYAKIVRKLGY------EDVKF---ADFGLHNLVASADVRFPIRLEALAHAHSN-YAHYEPELFPGLVYRMLEPKLALLIFVSGKVVITGAKSRDDLNDAFQKLYPVLCQFRKA 217          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A2T0FKA1_9ASCO (TATA-box-binding protein n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FKA1_9ASCO)

HSP 1 Score: 189 bits (481), Expect = 2.830e-56
Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKA 238
            ++ N+ AT ++ C +DLKT+ + ARNAEYNPKRF+A I+R+    EPK TAL+F +GK+VVTG++S      A + +ARI+ KL     G + K       D ++QN+V + DV FPIRLEGL A N G F +YEPELFPGLIYRM  PKI  LIFVSGK+VLTGAK  Q++ D F+ +YP L +F+K+
Sbjct:   59 TLQNIVATVNLACRLDLKTIALHARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIIQKL-----GFNAKFT-----DFKIQNIVGSCDVKFPIRLEGL-AFNHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQRQEIYDAFENIYPVLSEFRKS 233          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A7R9TBJ0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TBJ0_9VIRI)

HSP 1 Score: 190 bits (483), Expect = 3.700e-56
Identity = 103/210 (49.05%), Postives = 140/210 (66.67%), Query Frame = 0
Query:   28 EAQTAMMAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 237
            +A TA  A  +   ++       + N+ AT +M C +DL  + + ARNAEYNPKRFSA I+R+   +EPK TAL+F +GK+VVTG++S A    + K +ARI+ KL         K+NF   +D ++QN+V + DV FPIRLEG+  S+   F NYEPELFPGLIYRM+ PKI  LIFVSGKVVLTGAKS +++   F+ +YP L +F+K
Sbjct:   67 KAPTAAAAPAVDLTKHPSGIVPKLQNLVATVNMDCKLDLHKIALTARNAEYNPKRFSAVILRI---HEPKTTALIFHSGKMVVTGAKSEADARTSAKKYARIVQKL-------GFKVNF---KDFKIQNIVGSCDVKFPIRLEGISLSHSH-FSNYEPELFPGLIYRMRSPKIVLLIFVSGKVVLTGAKSRKEIYTAFEAIYPVLNEFRK 262          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: UPI001CB922F7 (TATA-box-binding protein-like isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB922F7)

HSP 1 Score: 188 bits (477), Expect = 4.330e-56
Identity = 94/188 (50.00%), Postives = 133/188 (70.74%), Query Frame = 0
Query:   50 SMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 237
            ++ N+ +T +++C +DLK++ ++ARNAEYNPKRF+A I+R+    EPK TAL+F +GK+V TG++S     +A + +ARI+ KL N +            +D ++QN+VA+ DV FPIRLEGL  S+ G F +YEPELFPGLIYRMK PKI  LIFVSGK+VLTGAK  ++    F+ +YP L +F+K
Sbjct:   25 TLQNIVSTVNLECKLDLKSIALQARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVCTGAKSEEQSRHAARKYARIIQKLGNAA----------KFKDFKIQNIVASCDVKFPIRLEGLAYSH-GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRK 198          
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Match: A0A507CSA2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CSA2_9FUNG)

HSP 1 Score: 189 bits (480), Expect = 4.800e-56
Identity = 99/185 (53.51%), Postives = 131/185 (70.81%), Query Frame = 0
Query:   53 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 237
            N+ AT +++  +DLKT+ + ARNAEYNPKRF+A I+R+    +PK TAL+F +GK+VVTG++S     YA + +ARI+ KL    G  + K       + ++QN+V + DV FPIRLEGL A+    F NYEPELFPGLIYRM DPKI  LIFVSGKVVLTGAK+ +Q+ D F+K+YP L  F+K
Sbjct:   67 NIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRI---RDPKTTALIFASGKMVVTGAKSEEQSRYAARKYARIIQKL----GFQAAKFT-----EFKIQNIVGSCDVKFPIRLEGL-ANAHSTFANYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKTREQIYDAFEKIYPVLTGFRK 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI4.910e-18198.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1D2AC59_AUXPR7.290e-5953.44Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A2P6VMN0_9CHLO3.750e-5752.38TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2... [more]
A0A5J4XYK7_9CHLO6.630e-5750.50TATA-box-binding 1 n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A2G2YW92_CAPAN1.480e-5649.21TATA-box-binding protein n=4 Tax=Capsicum TaxID=40... [more]
A0A7J7ISE2_9RHOD2.470e-5650.79Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A2T0FKA1_9ASCO2.830e-5652.38TATA-box-binding protein n=1 Tax=Wickerhamiella so... [more]
A0A7R9TBJ0_9VIRI3.700e-5649.05Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
UPI001CB922F74.330e-5650.00TATA-box-binding protein-like isoform X1 n=2 Tax=E... [more]
A0A507CSA2_9FUNG4.800e-5653.51Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 51..66
score: 31.78
coord: 75..94
score: 54.47
coord: 198..214
score: 74.97
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 50..132
e-value: 1.6E-25
score: 88.9
coord: 153..234
e-value: 5.5E-30
score: 103.2
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 48..238
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 53..235
e-value: 3.2E-63
score: 214.3
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 56..154
e-value: 3.2E-63
score: 214.3
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 48..238
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 46..134
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 151..240
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 183..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2965400..2967843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18315.1mRNA_Ecto-sp6_S_contig9.18315.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2964706..2969717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18315.1 ID=prot_Ecto-sp6_S_contig9.18315.1|Name=mRNA_Ecto-sp6_S_contig9.18315.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=275bp
MPRGGGGAGSSSGSKGAAPLGKQDAFNEAQTAMMAQVIGPFENHGQCKLS
MVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATA
LVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLER
DRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKI
CFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATART
AKAAASASASTDSSSEPARKKTKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS