prot_Ecto-sp6_S_contig9.18309.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18309.1
Unique Name	prot_Ecto-sp6_S_contig9.18309.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	572

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18309.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI)

HSP 1 Score: 1128 bits (2917), Expect = 0.000e+0
Identity = 564/571 (98.77%), Postives = 565/571 (98.95%), Query Frame = 0

Query:    1 VDVRKRAALSYRTGGQEEIEQGTWLWSACRFDRMAASSSSSTSSRSDEVWHRRLWGSVVGSSRGRSSNALSFLERSDRSTDSPTVAAATTNPWPVGFVPPQGTKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPYDTGSECSDAEEDSDICPSMLYSCFPCFNWSRRGKRRPADLLDGGLANSVKRESRAQLSLGTPLLTEQPPSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPAPQPLQPPLPLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPGAMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASTGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRVTAA 571
            +DVRKRAALSYRT GQEEIEQG WLWSA RFDRMAASSSSSTSSRSDEVWHRRLWGSVVGSSRGRSSNALSFLERSDRSTDSPTVAAATTNPWPVGFVPPQGTKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPYDTGSECSDAEEDSDICPSMLYSCFPCFNWSRRGKRRPADLLDGGLANSVKRESRAQLSL TPLLTEQPPSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPAPQPLQPPLPLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPG MKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPAS GNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRVTAA
Sbjct:   28 LDVRKRAALSYRTSGQEEIEQGAWLWSASRFDRMAASSSSSTSSRSDEVWHRRLWGSVVGSSRGRSSNALSFLERSDRSTDSPTVAAATTNPWPVGFVPPQGTKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPYDTGSECSDAEEDSDICPSMLYSCFPCFNWSRRGKRRPADLLDGGLANSVKRESRAQLSLSTPLLTEQPPSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPAPQPLQPPLPLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASAGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRVTAA 598

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18309.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FV86_ECTSI	0.000e+0	98.77	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 251..330

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:2918317..2926838 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18309.1	mRNA_Ecto-sp6_S_contig9.18309.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 2918317..2926838 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18309.1 ID=prot_Ecto-sp6_S_contig9.18309.1|Name=mRNA_Ecto-sp6_S_contig9.18309.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=572bp
VDVRKRAALSYRTGGQEEIEQGTWLWSACRFDRMAASSSSSTSSRSDEVW
HRRLWGSVVGSSRGRSSNALSFLERSDRSTDSPTVAAATTNPWPVGFVPP
QGTKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGL
GTLSGGMVAAGADRGGFLPRPYDTGSECSDAEEDSDICPSMLYSCFPCFN
WSRRGKRRPADLLDGGLANSVKRESRAQLSLGTPLLTEQPPSPTNFPTDV
KLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLA
TRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPAPQPLQPPL
PLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPGAMKG
NARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTR
VAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGW
EYSRGEETPASTGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWM
EGYVQGDQAVRRRLWRRVTAA*