prot_Ecto-sp6_S_contig9.18256.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18256.1
Unique Nameprot_Ecto-sp6_S_contig9.18256.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18256.1 vs. uniprot
Match: D7FVD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD4_ECTSI)

HSP 1 Score: 608 bits (1568), Expect = 7.040e-217
Identity = 333/349 (95.42%), Postives = 335/349 (95.99%), Query Frame = 0 
Query:   49 VAKEALTAEEAEKDAWRQAETKRVEDMVREEHVMLQDAANRRDGTVSTMETIGVEDADNMFEGFVGRINPRQYVLDGDRALPTRHPALPPSALGPRKVRFLENADVSMEAVTHQMAGVLRAVEEKVKKIEALQIDGPSGQQKKGSGNPSGALIAPPVSPPGITDSXXXXXXXXXXXXXGDVDNTKDNNFDRNGNPLDSTGDRGHLAVKSDGTLMAEGADTEIGPTPRYAPGTTYNDFSSHLFASSEAEELPNVTAQPWCTTTLHETGRCIGAELEVAMLCMQKRLGKQPIVYGEQDASGELEKEQGTEDSEASKPAEQPPEKEVVRTREHERSSRLQSASTPRRGPRTS 397
            VAKEALTAEEAEKDAWRQAETKRVEDMVREEHVMLQDAANRRD TVSTMETIGVEDADNMFEGFVGRI+PRQYVLDGDRALPTRHPALPPSALGPRK  FLENADVSMEAVTHQMAGVLR VEEKVKKIEALQIDGPSGQQK GSGNPSGALIAPPVSPPGITDSXXXXXXXXXXXXXGD DNTKDNNFDRNGNPLDS GDRGHLAVKSDGTLMAEGADTEIGP PRYAPGTTYNDFS HLFASSEAEELPNV AQPWCTTTL ET RCIGAELEVAMLCMQKRLGKQPIVYGEQDA+GELEKEQGTEDS ASKPAEQPPEKEVVRTREH RSSRLQSASTPRRGPRTS
Sbjct:   43 VAKEALTAEEAEKDAWRQAETKRVEDMVREEHVMLQDAANRRDDTVSTMETIGVEDADNMFEGFVGRISPRQYVLDGDRALPTRHPALPPSALGPRKFYFLENADVSMEAVTHQMAGVLRTVEEKVKKIEALQIDGPSGQQKGGSGNPSGALIAPPVSPPGITDSXXXXXXXXXXXXXGDADNTKDNNFDRNGNPLDSAGDRGHLAVKSDGTLMAEGADTEIGPAPRYAPGTTYNDFSRHLFASSEAEELPNVAAQPWCTTTLQETRRCIGAELEVAMLCMQKRLGKQPIVYGEQDATGELEKEQGTEDSVASKPAEQPPEKEVVRTREHGRSSRLQSASTPRRGPRTS 391
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVD4_ECTSI7.040e-21795.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2345779..2347716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18256.1mRNA_Ecto-sp6_S_contig9.18256.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2345779..2348574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18256.1 ID=prot_Ecto-sp6_S_contig9.18256.1|Name=mRNA_Ecto-sp6_S_contig9.18256.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=400bp
MDITKPILLIFFLPPVLGENLPVNLVQIAHDLDAKLLEFTLMAKAREQVA
KEALTAEEAEKDAWRQAETKRVEDMVREEHVMLQDAANRRDGTVSTMETI
GVEDADNMFEGFVGRINPRQYVLDGDRALPTRHPALPPSALGPRKVRFLE
NADVSMEAVTHQMAGVLRAVEEKVKKIEALQIDGPSGQQKKGSGNPSGAL
IAPPVSPPGITDSSSSSANEDDKEGGGDVDNTKDNNFDRNGNPLDSTGDR
GHLAVKSDGTLMAEGADTEIGPTPRYAPGTTYNDFSSHLFASSEAEELPN
VTAQPWCTTTLHETGRCIGAELEVAMLCMQKRLGKQPIVYGEQDASGELE
KEQGTEDSEASKPAEQPPEKEVVRTREHERSSRLQSASTPRRGPRTSKF*
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