prot_Ecto-sp6_S_contig9.18232.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18232.1
Unique Nameprot_Ecto-sp6_S_contig9.18232.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length764
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18232.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 1207 bits (3122), Expect = 0.000e+0
Identity = 687/764 (89.92%), Postives = 714/764 (93.46%), Query Frame = 0
Query:    1 MARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQEAAKAERNASGVAASTTKTAVDKAKTRSAATRAARVFDELLRALGARGRGLDSGGRPYGLSLLQVVEGVAAQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIASEVDERHSVEDLQGGGSEPEQRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDND-DDGDDGTAAEQEGGARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAAAEESXXXXXXSQVNEEGSNSAGGTAARPSAEQSYQLLRQRLREASLNGNASAGIRNVEQSCAAA-VAAAAELTKEAGRGPDRRHPSQAPTQGASESHRDILRRVTILAERGRPHAALAALQAVDGRKRGTRVAVPYKVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFEPDRFTFATLIHGLARAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEAISFAQHAYNQYGCAPTAGKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLEERGAFD 762
            MARA++LALCVRDSGL+S  AMSRSM+AFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAI SDLRQ+A KAERNAS VAASTTKTAVDKAKTRSAATRAA VFDELLRALGARGRGLDSG R YGLSLL+VV+ VAAQAHACG+RSQGDVDSRLTATLQAVLTTSRFLDREDA SINKAIRTALDSAA AIA+EV  RH VEDLQ GGSEPE RREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDN+ DDG DGTAAEQEG ARRV  VG AIRGMV+SSTTRGV EWDAQEPL AAE+       +Q N+E S S G +AA+PSAEQSYQLLRQR REASLNGNAS G+RNVEQSCAAA VAAAAE+TK+AGRG DRRHPSQAPT GASESHRDILRRVT+LAERGRPHAALAALQAVDGRKRGTRV+VPY+VYALLFRALANGYSAQG EELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQ GGFEPDRFTF+TLIHGLA+AGDN      XXXXXXXXXXXXXXXXXXXXXXXXXXX VGEAISFAQHAYNQYGCAPTAGK+CRVVHAAAAL+DGQHEARRAIVVAEQMWEG+WRGEGKTSHPVLGHANLRRLLEERGAFD
Sbjct: 1974 MARAAALALCVRDSGLVSGAAMSRSMDAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAILSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAALVFDELLRALGARGRGLDSGDRLYGLSLLRVVDDVAAQAHACGERSQGDVDSRLTATLQAVLTTSRFLDREDATSINKAIRTALDSAAAAIAAEVGGRHPVEDLQ-GGSEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDNNNDDGADGTAAEQEGDARRVGRVGGAIRGMVKSSTTRGVGEWDAQEPLGAAEKYASGGGDTQGNDEASYSTGDSAAQPSAEQSYQLLRQRRREASLNGNASVGVRNVEQSCAAAAVAAAAEVTKDAGRGLDRRHPSQAPTPGASESHRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRVSVPYRVYALLFRALANGYSAQGCEELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQSGGFEPDRFTFSTLIHGLAKAGDNNGAWEVXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGEAISFAQHAYNQYGCAPTAGKYCRVVHAAAALNDGQHEARRAIVVAEQMWEGEWRGEGKTSHPVLGHANLRRLLEERGAFD 2736          
BLAST of mRNA_Ecto-sp6_S_contig9.18232.1 vs. uniprot
Match: D7FVF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF8_ECTSI)

HSP 1 Score: 1075 bits (2780), Expect = 0.000e+0
Identity = 588/626 (93.93%), Postives = 596/626 (95.21%), Query Frame = 0
Query:    1 MARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQEAAKAERNASGVAASTTKTAVDKAKTRSAATRAARVFDELLRALGARGRGLDSGGRPYGLSLLQVVEGVAAQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIASEVDERHSVEDLQGGGSEPEQRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDNDDDGDDGTAAEQEGGARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAAAEESXXXXXXSQVNEEGSNSAGGTAARPSAEQSYQLLRQRLREASLNGNASAGIRNVEQSCAAAVAAAAELTKEAGRGPDRRHPSQAPTQGASESHRDILRRVTILAERGRPHAALAALQAVDGRKRGTRVAVPYKVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE 626
            MARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQ+A KAERNAS VAASTTKTAVDKAKTRSAATRAARVFDELLRALGARGRGLDSGGRPYGLSLL+VVE VA QAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIA       SVEDLQ G SEPE RREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDN+DDGDDGTAAEQEG ARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAAAEES      +QVNEEG       A RPSAEQSYQLLRQRLREASLNGNASAG+RNVEQSCAAAVAAAAELTKEAGRGPDRRHPSQAPTQGASESHRDIL+RVT+LAERGRPHAALAALQAVDGRKRGTRVAVPY+VYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGY AKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE
Sbjct:  242 MARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAARVFDELLRALGARGRGLDSGGRPYGLSLLEVVEDVAGQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIA-------SVEDLQ-GRSEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDNNDDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAAAEESANGDGGTQVNEEGXXXXXXXAVRPSAEQSYQLLRQRLREASLNGNASAGVRNVEQSCAAAVAAAAELTKEAGRGPDRRHPSQAPTQGASESHRDILKRVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYPAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE 859          
BLAST of mRNA_Ecto-sp6_S_contig9.18232.1 vs. uniprot
Match: D7FVF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF9_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.720e-49
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
Query:  680 VGEAISFAQHAYNQYGCAPTAGKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLEERGAFDY 763
            VGEAISFAQHAYNQYGCAPTAGKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLEERGAFDY
Sbjct:   38 VGEAISFAQHAYNQYGCAPTAGKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLEERGAFDY 121          
BLAST of mRNA_Ecto-sp6_S_contig9.18232.1 vs. uniprot
Match: UPI000C1D76DB (pentatricopeptide repeat-containing protein At3g09060-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D76DB)

HSP 1 Score: 53.9 bits (128), Expect = 9.230e-5
Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  590 VAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFEPDRFTFATLIHGLARAG 643
            VAPN+ +FNI++K+ C+ Q FD+  + +  + R    PD +++ TLI+GLA++G
Sbjct:   52 VAPNLETFNILMKIACKKQQFDKCRDLINYVWRRNLRPDVYSYGTLINGLAKSG 105          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KBD4_9PHAE0.000e+089.92Integrase catalytic domain-containing protein n=1 ... [more]
D7FVF8_ECTSI0.000e+093.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVF9_ECTSI1.720e-49100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000C1D76DB9.230e-540.74pentatricopeptide repeat-containing protein At3g09... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..429
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 590..691
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..763
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 592..641
e-value: 1.1E-12
score: 47.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 595..628
e-value: 7.9E-6
score: 23.7
coord: 630..664
e-value: 3.1E-6
score: 25.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..265
score: 6.478
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 593..627
score: 11.082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 628..662
score: 12.003
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 663..698
score: 6.456
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 7.18
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 455..744
e-value: 1.4E-27
score: 98.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2087120..2095344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18232.1mRNA_Ecto-sp6_S_contig9.18232.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2086287..2098052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18232.1 ID=prot_Ecto-sp6_S_contig9.18232.1|Name=mRNA_Ecto-sp6_S_contig9.18232.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=764bp
MARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAE
VVRGLARCGRQSEVEAIFSDLRQEAAKAERNASGVAASTTKTAVDKAKTR
SAATRAARVFDELLRALGARGRGLDSGGRPYGLSLLQVVEGVAAQAHACG
DRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIAS
EVDERHSVEDLQGGGSEPEQRREWAGPNLAALSLLALLHVSQNRWEGIPA
AIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGF
GPPRDNDDDGDDGTAAEQEGGARRVVGVGEAIRGMVESSTTRGVDEWDAQ
EPLAAAEESANGGGGSQVNEEGSNSAGGTAARPSAEQSYQLLRQRLREAS
LNGNASAGIRNVEQSCAAAVAAAAELTKEAGRGPDRRHPSQAPTQGASES
HRDILRRVTILAERGRPHAALAALQAVDGRKRGTRVAVPYKVYALLFRAL
ANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAV
AAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNII
VKVMCRLQMFDQAFEALEVMQRGGFEPDRFTFATLIHGLARAGDNDGAWE
VMVEMTNRGIAPDSIVIDGVVGGFVQSGDVGEAISFAQHAYNQYGCAPTA
GKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHAN
LRRLLEERGAFDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf