prot_Ecto-sp6_S_contig9.18194.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18194.1
Unique Nameprot_Ecto-sp6_S_contig9.18194.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18194.1 vs. uniprot
Match: A0A6H5KJF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 4.050e-49
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0 
Query:    1 MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFLWNRRRSRAD 77
            MGNHDRPQTTKSVLINMWSTLTI LPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDF+WNRRRSRAD
Sbjct:    1 MGNHDRPQTTKSVLINMWSTLTIVLPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFVWNRRRSRAD 77
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BLAST of mRNA_Ecto-sp6_S_contig9.18194.1 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.060e-20
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0 
Query:    1 MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFLWNRRR 73
            M  HD+PQT KS++IN+WS ++I  P+ +IVR +    +L VW A T +MM+VPP GW+RPH YSDF WNRRR
Sbjct:  366 MAKHDKPQTLKSMVINLWSLVSILGPMVLIVRMETWQAVLAVWVAVTLLMMIVPPFGWLRPHAYSDFEWNRRR 438
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BLAST of mRNA_Ecto-sp6_S_contig9.18194.1 vs. uniprot
Match: A0A7S2A8U7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8U7_TRICV)

HSP 1 Score: 54.3 bits (129), Expect = 1.110e-7
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:    5 DRPQTTKSVLINMWSTLTIFLPIFIIVRFDL----LWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFLWNRRRSRAD 77
            DR    KS+ IN+ +TL  FLPI     FD      +  ++ W+ A +++  +PP GW+RPHPYSDF WN+     D
Sbjct:   35 DRGLDPKSIAINIATTLFFFLPI--AAYFDASNARFYCEVVGWSMALALL--IPPFGWLRPHPYSDFAWNKPVGHRD 107
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJF0_9PHAE4.050e-4997.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z948_9STRA2.060e-2056.16Sulfotransferase family-domain-containing protein ... [more]
A0A7S2A8U7_TRICV1.110e-740.26Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
NoneNo IPR availableTMHMMTMhelixcoord: 40..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1752530..1755731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18194.1mRNA_Ecto-sp6_S_contig9.18194.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1751564..1756141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18194.1 ID=prot_Ecto-sp6_S_contig9.18194.1|Name=mRNA_Ecto-sp6_S_contig9.18194.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=78bp
MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIM
MVVPPVGWIRPHPYSDFLWNRRRSRAD*
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