prot_Ecto-sp6_S_contig9.18192.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18192.1
Unique Nameprot_Ecto-sp6_S_contig9.18192.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length353
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 603 bits (1555), Expect = 2.590e-216
Identity = 322/353 (91.22%), Postives = 331/353 (93.77%), Query Frame = 0
Query:    1 MAVSGRTGVAACKLLMRARVQRQACAASNRARPLQPQRPSFRQEDVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS-----RGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHF 348
            MAV+G  G+AACK+LM+ARVQRQACAAS+RARPLQP+RPSFR EDVLYMDNHVLLVNKPAGLLSQSDRTGD DVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARD VEKIYHAVVAG LAGRGIRQD LVSPDASGAVARRGRGPRTGLSS P RG AGGRLLAAGPTSS +GKLAQLEWEAI+VSPSSA RLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS     RGGD TDESAVPPPR AG MEPLEDRSILLHASELIVPHPTRVGA VRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARG+H 
Sbjct:    1 MAVAGTRGMAACKVLMQARVQRQACAASSRARPLQPRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGAGGRLLAAGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPR-AGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGEHL 352          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 4.440e-161
Identity = 238/244 (97.54%), Postives = 239/244 (97.95%), Query Frame = 0
Query:  108 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHFDVT 351
            MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPR GLSSVPARG AGGRLLAAGPTSSPDGKLAQLEWEAINVS SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGD TDESAVPPPRRAGR+EPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQP TGSVVECARGDHFDVT
Sbjct:    1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPATGSVVECARGDHFDVT 244          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78)

HSP 1 Score: 164 bits (415), Expect = 2.070e-45
Identity = 114/273 (41.76%), Postives = 141/273 (51.65%), Query Frame = 0
Query:   45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
            DVLY+DNH+L+VNKP GLL+Q+D TGD DV  L + +++    K G  F+ LVHRLDRP SGVM +ARTSKAAARLS  FR R   EK Y A+V G   G G   D LV                             GR +   P + P  + A+L W  +  +   A RL         +LV VRL TGR HQ+RVQLA  GHP++GD RYG SR                    PL+ R++ LHA  L + HPTR    +  VA PP  W
Sbjct:    4 DVLYLDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLVKA---------------------------GRTVRVVPATHPGARRAELAWRVL--ATDEAERL---------SLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGASR--------------------PLDGRNLALHAYRLGIEHPTR-RVPMHWVAPPPAAW 216          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT)

HSP 1 Score: 160 bits (405), Expect = 5.970e-44
Identity = 110/270 (40.74%), Postives = 138/270 (51.11%), Query Frame = 0
Query:   45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPP 314
            DVLY+DNH+L+VNKP G+L+Q+D TGD DV  L + Y++    K G  F+ LVHRLDRP SGVM +ARTSKAAARLS  FR R   EK Y A+V G+  G G   D L+                             GR +   P + P GK A+L W  +     S  R+         +LV VRL TGR HQIRVQLA  GHP++GD RY                    G  +P + R++ LH+  L + HPTR  A    V  PP
Sbjct:    4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKV---------------------------GRTVRVVPATHPGGKRAELAWRVLG----SDGRV---------SLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRY--------------------GARQPFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP 212          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT)

HSP 1 Score: 157 bits (396), Expect = 1.720e-42
Identity = 116/279 (41.58%), Postives = 144/279 (51.61%), Query Frame = 0
Query:   45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGR 323
            ++L++DNH+L+V KPAG+LSQ D TGD DVA  A+ +++   NK G  FV LV RLDRP SGVM +ARTSKAA+RL+  FR R  VEK+Y A+V G L G G  +D L     +                       G R+     T+S   K A LEW A+              T   RTLVRV L TGR HQ+RVQL  +GHP+VGD RY            A P P   G        SI LHA+ L + HPT+     R  AAPP  W +   R
Sbjct:    4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPASGVMVLARTSKAASRLTEQFRKRS-VEKVYLALVEGKLEGSGRLEDWLFKTHDT---------------------ETGTRVKRVSSTTS-GAKKAVLEWRALA-------------TVRGRTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY------------AAPVPLGDGH-------SIALHAAHLALDHPTQKDRR-RFTAAPPPAWGEDFAR 226          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 155 bits (392), Expect = 4.510e-42
Identity = 111/273 (40.66%), Postives = 147/273 (53.85%), Query Frame = 0
Query:   45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
            +VLY+DNH+L+V KP GLL+Q+DRTGD D+    + +++   +K G  F+ LVHRLDRPVSGVM +ARTSKAA RLS +FR R  VEK Y A+V G ++G G R+D L+  D  G V                      R+++A     P GK A L W+A+        RL         +LV V+L+TGR HQ+RVQLA +G P++GD RYG +R                     L+ R++ LHA  L   HP R    V   A PP  W
Sbjct:    2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKED--GRV----------------------RIVSA---DHPKGKRAVLRWQALG----EEGRL---------SLVEVKLLTGRAHQVRVQLAALGTPILGDFRYGATR--------------------ELDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A7K1ZH14_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZH14_9BACT)

HSP 1 Score: 154 bits (390), Expect = 2.180e-41
Identity = 115/292 (39.38%), Postives = 148/292 (50.68%), Query Frame = 0
Query:   33 PLQPQRPSFRQEDVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHP-TRVGATVRAVAAPPGMWSDLCGR 323
            P+ P+RP      +LYMDNH+L+VNKP G+L Q D T D D+  L + Y++    K G+AF+ LVHRLDRP SGV+ +ARTSKAAARLS  FR R   EK Y A+V G   G G  +  L       A + RG                G R++ AG  S   GK A+L+W ++ V              +  +L+ VRL TGRKHQIRVQ +  GHP++GD RY                    G +  L+ R++ LHA  L V HP TR   T      PP  W  L  R
Sbjct:   13 PVDPKRPDLH---ILYMDNHLLVVNKPPGMLVQQDETNDPDLLRLGKRYLKETFAKKGQAFLGLVHRLDRPASGVVVLARTSKAAARLSDQFRQRTP-EKEYLALVEGVCRGSGTLRHTL-------AASVRG----------------GVRIVPAGDAS---GKEARLQWRSLGVQ-------------DDLSLLSVRLETGRKHQIRVQFSAEGHPILGDFRY--------------------GALRELDGRNLALHAFRLTVAHPVTRERMTF--CTPPPPAWGTLFAR 239          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 151 bits (381), Expect = 2.760e-40
Identity = 110/274 (40.15%), Postives = 139/274 (50.73%), Query Frame = 0
Query:   45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
            DVLY+DNH+L+V KPAG+LSQ+D TGD+DV   A++++R   +K G  F  LVHRLDRPV G M +ARTSKAA+RL+  FR R   EK Y A+V G L G G   D L+            R P+ G      R    G             K A + W + +V                R+LV V L TGR HQIRVQL+ +GHP+VGD RY                    G   PL D R I LHA+ L + HPT+        +APP +W
Sbjct:    4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----------RDPKRGTRVKRVRQGTDGA------------KRAVMTWTSRSVL-------------GTRSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRY--------------------GAEAPLGDGRGIALHATHLTIEHPTKRDRRT-FTSAPPRVW 220          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT)

HSP 1 Score: 150 bits (378), Expect = 6.480e-40
Identity = 107/275 (38.91%), Postives = 139/275 (50.55%), Query Frame = 0
Query:   47 LYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRVGATVRAVAAPPGMWSDL 320
            LY+DNH+L V+KP GLL+Q+DRTGD D+ +LA+ Y++   +K G  FV LVHRLDRP SGVM +ARTSKAA+RLS  FR R   +K Y AVV G     G   + + + D  G                      GG +                +   +     +A+R R     + R+LV V L+TGRKHQIR QLAE+G P++GD RY                    G   P  D R + LHA  L+V HPT+    V  VA PP  W+ L
Sbjct:    4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAIDKGG----------------------GGSV----------------DVVPVGEGQRAALRYRTLARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRY--------------------GNQTPFADGRGVALHAYRLVVEHPTK-REPVTVVAPPPEAWAGL 218          
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT)

HSP 1 Score: 149 bits (377), Expect = 1.200e-39
Identity = 120/292 (41.10%), Postives = 148/292 (50.68%), Query Frame = 0
Query:   46 VLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTG 337
            VLY+DNH+L+VNKPAGL SQ DR+G   V +L +  ++   NK G  ++ LVHRLD PVSGVM +ARTSKAAARL   FR R  VEKIY A+V G L G G+ +D +                       PAR     RL++A     P GK A L WEA+              T N  TLVR+   TGRKHQIRVQLA  G+PV+GD RY                  RA R   L    + LHA +L V HPTR    ++  A  P  W D   R  +D +      +G
Sbjct:    9 VLYLDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERT-VEKIYLALVEGELEGEGVWEDFI----------------------APARDHM--RLVSA---DHPWGKRAVLRWEALM-------------TRNGLTLVRLIPETGRKHQIRVQLAFRGYPVLGDRRY------------------RARRW--LAPGQMALHAWKLSVTHPTR-RERMQWTAPVPSCW-DSAFRLKVDRLLAYLEASG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE2.590e-21691.22PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI4.440e-16197.5423S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
UPI001420CA782.070e-4541.76RNA pseudouridine synthase n=1 Tax=Rhodocaloribact... [more]
A0A3M1NPK6_9BACT5.970e-4440.74RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]
A0A259TYX9_9BACT1.720e-4241.58PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A848XZP8_9BACT4.510e-4240.66RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A7K1ZH14_9BACT2.180e-4139.38RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A800M4B4_9BACT2.760e-4040.15RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A271J2Z8_9BACT6.480e-4038.91PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A1M6P7L7_9BACT1.200e-3941.10Ribosomal large subunit pseudouridine synthase D n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 37..311
e-value: 9.3E-47
score: 161.3
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 42..314
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 52..245
e-value: 6.0E-27
score: 94.7
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 45..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1745475..1747458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18192.1mRNA_Ecto-sp6_S_contig9.18192.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1745475..1747497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18192.1 ID=prot_Ecto-sp6_S_contig9.18192.1|Name=mRNA_Ecto-sp6_S_contig9.18192.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=353bp
MAVSGRTGVAACKLLMRARVQRQACAASNRARPLQPQRPSFRQEDVLYMD
NHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRL
DRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQD
LLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQ
LEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHP
VVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHP
TRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHFDV
TK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf