prot_Ecto-sp6_S_contig9.18192.1 (polypeptide) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE) HSP 1 Score: 603 bits (1555), Expect = 2.590e-216 Identity = 322/353 (91.22%), Postives = 331/353 (93.77%), Query Frame = 0
Query: 1 MAVSGRTGVAACKLLMRARVQRQACAASNRARPLQPQRPSFRQEDVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS-----RGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHF 348
MAV+G G+AACK+LM+ARVQRQACAAS+RARPLQP+RPSFR EDVLYMDNHVLLVNKPAGLLSQSDRTGD DVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARD VEKIYHAVVAG LAGRGIRQD LVSPDASGAVARRGRGPRTGLSS P RG AGGRLLAAGPTSS +GKLAQLEWEAI+VSPSSA RLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS RGGD TDESAVPPPR AG MEPLEDRSILLHASELIVPHPTRVGA VRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARG+H
Sbjct: 1 MAVAGTRGMAACKVLMQARVQRQACAASSRARPLQPRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGAGGRLLAAGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPR-AGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGEHL 352
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 4.440e-161 Identity = 238/244 (97.54%), Postives = 239/244 (97.95%), Query Frame = 0
Query: 108 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHFDVT 351
MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPR GLSSVPARG AGGRLLAAGPTSSPDGKLAQLEWEAINVS SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGD TDESAVPPPRRAGR+EPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQP TGSVVECARGDHFDVT
Sbjct: 1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPATGSVVECARGDHFDVT 244
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78) HSP 1 Score: 164 bits (415), Expect = 2.070e-45 Identity = 114/273 (41.76%), Postives = 141/273 (51.65%), Query Frame = 0
Query: 45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
DVLY+DNH+L+VNKP GLL+Q+D TGD DV L + +++ K G F+ LVHRLDRP SGVM +ARTSKAAARLS FR R EK Y A+V G G G D LV GR + P + P + A+L W + + A RL +LV VRL TGR HQ+RVQLA GHP++GD RYG SR PL+ R++ LHA L + HPTR + VA PP W
Sbjct: 4 DVLYLDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLVKA---------------------------GRTVRVVPATHPGARRAELAWRVL--ATDEAERL---------SLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGASR--------------------PLDGRNLALHAYRLGIEHPTR-RVPMHWVAPPPAAW 216
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT) HSP 1 Score: 160 bits (405), Expect = 5.970e-44 Identity = 110/270 (40.74%), Postives = 138/270 (51.11%), Query Frame = 0
Query: 45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPP 314
DVLY+DNH+L+VNKP G+L+Q+D TGD DV L + Y++ K G F+ LVHRLDRP SGVM +ARTSKAAARLS FR R EK Y A+V G+ G G D L+ GR + P + P GK A+L W + S R+ +LV VRL TGR HQIRVQLA GHP++GD RY G +P + R++ LH+ L + HPTR A V PP
Sbjct: 4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKV---------------------------GRTVRVVPATHPGGKRAELAWRVLG----SDGRV---------SLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRY--------------------GARQPFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP 212
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT) HSP 1 Score: 157 bits (396), Expect = 1.720e-42 Identity = 116/279 (41.58%), Postives = 144/279 (51.61%), Query Frame = 0
Query: 45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGR 323
++L++DNH+L+V KPAG+LSQ D TGD DVA A+ +++ NK G FV LV RLDRP SGVM +ARTSKAA+RL+ FR R VEK+Y A+V G L G G +D L + G R+ T+S K A LEW A+ T RTLVRV L TGR HQ+RVQL +GHP+VGD RY A P P G SI LHA+ L + HPT+ R AAPP W + R
Sbjct: 4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPASGVMVLARTSKAASRLTEQFRKRS-VEKVYLALVEGKLEGSGRLEDWLFKTHDT---------------------ETGTRVKRVSSTTS-GAKKAVLEWRALA-------------TVRGRTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY------------AAPVPLGDGH-------SIALHAAHLALDHPTQKDRR-RFTAAPPPAWGEDFAR 226
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT) HSP 1 Score: 155 bits (392), Expect = 4.510e-42 Identity = 111/273 (40.66%), Postives = 147/273 (53.85%), Query Frame = 0
Query: 45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
+VLY+DNH+L+V KP GLL+Q+DRTGD D+ + +++ +K G F+ LVHRLDRPVSGVM +ARTSKAA RLS +FR R VEK Y A+V G ++G G R+D L+ D G V R+++A P GK A L W+A+ RL +LV V+L+TGR HQ+RVQLA +G P++GD RYG +R L+ R++ LHA L HP R V A PP W
Sbjct: 2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKED--GRV----------------------RIVSA---DHPKGKRAVLRWQALG----EEGRL---------SLVEVKLLTGRAHQVRVQLAALGTPILGDFRYGATR--------------------ELDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A7K1ZH14_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZH14_9BACT) HSP 1 Score: 154 bits (390), Expect = 2.180e-41 Identity = 115/292 (39.38%), Postives = 148/292 (50.68%), Query Frame = 0
Query: 33 PLQPQRPSFRQEDVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHP-TRVGATVRAVAAPPGMWSDLCGR 323
P+ P+RP +LYMDNH+L+VNKP G+L Q D T D D+ L + Y++ K G+AF+ LVHRLDRP SGV+ +ARTSKAAARLS FR R EK Y A+V G G G + L A + RG G R++ AG S GK A+L+W ++ V + +L+ VRL TGRKHQIRVQ + GHP++GD RY G + L+ R++ LHA L V HP TR T PP W L R
Sbjct: 13 PVDPKRPDLH---ILYMDNHLLVVNKPPGMLVQQDETNDPDLLRLGKRYLKETFAKKGQAFLGLVHRLDRPASGVVVLARTSKAAARLSDQFRQRTP-EKEYLALVEGVCRGSGTLRHTL-------AASVRG----------------GVRIVPAGDAS---GKEARLQWRSLGVQ-------------DDLSLLSVRLETGRKHQIRVQFSAEGHPILGDFRY--------------------GALRELDGRNLALHAFRLTVAHPVTRERMTF--CTPPPPAWGTLFAR 239
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT) HSP 1 Score: 151 bits (381), Expect = 2.760e-40 Identity = 110/274 (40.15%), Postives = 139/274 (50.73%), Query Frame = 0
Query: 45 DVLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRVGATVRAVAAPPGMW 317
DVLY+DNH+L+V KPAG+LSQ+D TGD+DV A++++R +K G F LVHRLDRPV G M +ARTSKAA+RL+ FR R EK Y A+V G L G G D L+ R P+ G R G K A + W + +V R+LV V L TGR HQIRVQL+ +GHP+VGD RY G PL D R I LHA+ L + HPT+ +APP +W
Sbjct: 4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----------RDPKRGTRVKRVRQGTDGA------------KRAVMTWTSRSVL-------------GTRSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRY--------------------GAEAPLGDGRGIALHATHLTIEHPTKRDRRT-FTSAPPRVW 220
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT) HSP 1 Score: 150 bits (378), Expect = 6.480e-40 Identity = 107/275 (38.91%), Postives = 139/275 (50.55%), Query Frame = 0
Query: 47 LYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRVGATVRAVAAPPGMWSDL 320
LY+DNH+L V+KP GLL+Q+DRTGD D+ +LA+ Y++ +K G FV LVHRLDRP SGVM +ARTSKAA+RLS FR R +K Y AVV G G + + + D G GG + + + +A+R R + R+LV V L+TGRKHQIR QLAE+G P++GD RY G P D R + LHA L+V HPT+ V VA PP W+ L
Sbjct: 4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAIDKGG----------------------GGSV----------------DVVPVGEGQRAALRYRTLARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRY--------------------GNQTPFADGRGVALHAYRLVVEHPTK-REPVTVVAPPPEAWAGL 218
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT) HSP 1 Score: 149 bits (377), Expect = 1.200e-39 Identity = 120/292 (41.10%), Postives = 148/292 (50.68%), Query Frame = 0
Query: 46 VLYMDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGSAGGRLLAAGPTSSPDGKLAQLEWEAINVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDETDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTG 337
VLY+DNH+L+VNKPAGL SQ DR+G V +L + ++ NK G ++ LVHRLD PVSGVM +ARTSKAAARL FR R VEKIY A+V G L G G+ +D + PAR RL++A P GK A L WEA+ T N TLVR+ TGRKHQIRVQLA G+PV+GD RY RA R L + LHA +L V HPTR ++ A P W D R +D + +G
Sbjct: 9 VLYLDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERT-VEKIYLALVEGELEGEGVWEDFI----------------------APARDHM--RLVSA---DHPWGKRAVLRWEALM-------------TRNGLTLVRLIPETGRKHQIRVQLAFRGYPVLGDRRY------------------RARRW--LAPGQMALHAWKLSVTHPTR-RERMQWTAPVPSCW-DSAFRLKVDRLLAYLEASG 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig9.18192.1 ID=prot_Ecto-sp6_S_contig9.18192.1|Name=mRNA_Ecto-sp6_S_contig9.18192.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=353bpback to top |