prot_Ecto-sp6_S_contig9.18156.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18156.1
Unique Nameprot_Ecto-sp6_S_contig9.18156.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length128
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Match: D7G0N6_ECTSI (Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N6_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 6.130e-64
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0
Query:    1 MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE--GAAGAARVSRRPGLPRWGGAFRAIARGLTAGAA 109
            MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE  GAAGAARVSRRPGLPRWGGA  +IARGLTAGAA
Sbjct:    1 MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGEVQGAAGAARVSRRPGLPRWGGALCSIARGLTAGAA 111          
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Match: A0A1S8W7W3_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W7W3_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 1.540e-7
Identity = 24/49 (48.98%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   28 VRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE 76
            VR+LG L+SY+   ++A V+Y+G QL +D  LL  F ++I+SLY++IGE
Sbjct:    6 VRILGRLRSYNVHTNMAQVEYRGQQLLVDTALLGIFDYKINSLYQWIGE 54          
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Match: A0A0L0H773_SPIPD (Uncharacterized protein (Fragment) n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H773_SPIPD)

HSP 1 Score: 53.5 bits (127), Expect = 1.950e-6
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    7 TIQPGKIHLVREILRDGVTGS-VRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE 76
            T + GKI  + EI    ++GS VRV+G+L +YD    +AV+++   QL +D  LL  F  R  SL +FIGE
Sbjct:    6 TRRHGKIVHIEEIQAQSMSGSSVRVIGTLLTYDTNTSLAVIEHARSQLVVDLSLLGPFSNRTKSLLQFIGE 76          
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Match: D8RL68_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RL68_SELML)

HSP 1 Score: 50.8 bits (120), Expect = 1.230e-5
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   27 SVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE-----GAAGAARVSR 86
            S+RV+G+L+S+D  + VA + ++G +L +D  LL D   R  SLY+FIGE     G    ARV+R
Sbjct:   24 SLRVMGTLESFDVESGVAHIRHEGAKLAVDTTLLRDIHLRPGSLYQFIGELLLQNGMMLRARVAR 88          
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Match: F4P7T1_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P7T1_BATDJ)

HSP 1 Score: 49.7 bits (117), Expect = 6.950e-5
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   27 SVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGE 76
            +VRVLG LK Y+   ++   +YKG  ++ID  LL  F +++ SLY++IGE
Sbjct:   55 TVRVLGRLKDYNVHKNIVQAEYKGQCMSIDTTLLGIFDYKLGSLYQWIGE 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G0N6_ECTSI6.130e-6495.50Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus si... [more]
A0A1S8W7W3_9FUNG1.540e-748.98Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A0L0H773_SPIPD1.950e-642.25Uncharacterized protein (Fragment) n=2 Tax=Spizell... [more]
D8RL68_SELML1.230e-543.08Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
F4P7T1_BATDJ6.950e-544.00Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 8..78
e-value: 2.2E-12
score: 46.7
NoneNo IPR availableGENE3D2.40.50.140coord: 6..86
e-value: 1.8E-8
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1460610..1463014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18156.1mRNA_Ecto-sp6_S_contig9.18156.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1458951..1463014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18156.1 ID=prot_Ecto-sp6_S_contig9.18156.1|Name=mRNA_Ecto-sp6_S_contig9.18156.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=128bp
MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKG
DQLTIDACLLTDFQFRIDSLYEFIGEGAAGAARVSRRPGLPRWGGAFRAI
ARGLTAGAANNDSGRTTFDWNHGCICP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029146Ten1_animal_plant