prot_Ecto-sp6_S_contig9.18125.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18125.1
Unique Nameprot_Ecto-sp6_S_contig9.18125.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18125.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.480e-36
Identity = 127/137 (92.70%), Postives = 127/137 (92.70%), Query Frame = 0 
Query:   74 LAARPALIFCRVVDALQSALKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AAHEA----IKPLSKNGGVVAILAAMGLKEDFASAVVGGEREAGAMGEREKAEACRARVLNLLCEGEVFALAGSRS 204
            LAARPALIFCRVVDALQSALKS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AAHEA    IKPLSKNGGVVAIL AMGLKEDFASAVVGGEREAG M EREKAEACRARVLNLLCEGEVFALAGSRS
Sbjct: 8601 LAARPALIFCRVVDALQSALKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHEAYERAIKPLSKNGGVVAILEAMGLKEDFASAVVGGEREAGTMDEREKAEACRARVLNLLCEGEVFALAGSRS 8737
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BLAST of mRNA_Ecto-sp6_S_contig9.18125.1 vs. uniprot
Match: D8LLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX1_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.810e-30
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0 
Query:  133 AAHEAIKPLSKNGGVVAILAAMGLKEDFASAVVGGEREAGAMGEREKAEACRARVLNLLCEGEVFALAGSRS 204
            A   AIKPLSKNGGVVAILAAMGLKEDFASAVVGGEREAGAMGEREKAEACRARVLNLLCEGEVFALAGSRS
Sbjct:  584 AYERAIKPLSKNGGVVAILAAMGLKEDFASAVVGGEREAGAMGEREKAEACRARVLNLLCEGEVFALAGSRS 655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE6.480e-3692.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX1_ECTSI1.810e-3095.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1164137..1164813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18125.1mRNA_Ecto-sp6_S_contig9.18125.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1164018..1164813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18125.1 ID=prot_Ecto-sp6_S_contig9.18125.1|Name=mRNA_Ecto-sp6_S_contig9.18125.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=205bp
GGCGQPCAAGGRRRRRGCLRRRQRAPSESVRRATLALHLVGLRGAVPLTR
RRQRQPNPESQWRREEEEQEESVLAARPALIFCRVVDALQSALKSGGGGN
AAAAVAAAAGGGQGTLEVFLSGGDDLLLAASSAAHEAIKPLSKNGGVVAI
LAAMGLKEDFASAVVGGEREAGAMGEREKAEACRARVLNLLCEGEVFALA
GSRS*
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