prot_Ecto-sp6_S_contig9.18124.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18124.1
Unique Nameprot_Ecto-sp6_S_contig9.18124.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length268
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18124.1 vs. uniprot
Match: A0A6H5JB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB41_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 1.390e-161
Identity = 237/267 (88.76%), Postives = 241/267 (90.26%), Query Frame = 0 
Query:    1 MRYVCGIVPLVMIASGEAFVMPSALRLSAAVAPSARLLYSGQQGRRVVTMAAEGLPPGDHNNNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRGAGKRTPRQDESIRWVASTESGHRARSTLLPRAVWVLLFNQGSGPFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTDLQRFCLDHSFGIWMIPANVVPEAPRKTKKDLGFDPLNLASSPHGGRGAREEEGSVLTPDDIRKWRAKFERLYTQE 267
            MR VCGI  LVMI   EAFV PSA RLSAAVAPS RLLYSGQQGRRVVTMAAEGLPPGDHN  DPLDAQSSIPD VGSAAIRR+IDSIKRSRGAGKRTPRQ ESIRWVASTES HRAR TLLPRAVWVLLF+QGSG F SSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIP PTRVSMTDLQRFCLDHSFGI MIPA+VVPEAPRKTKKDLGFDPLNL SSPHG R A E+ G VLTPDDIRKWRAKFERLY QE
Sbjct:    1 MRCVCGIALLVMITRAEAFVTPSAFRLSAAVAPSTRLLYSGQQGRRVVTMAAEGLPPGDHNI-DPLDAQSSIPDSVGSAAIRRQIDSIKRSRGAGKRTPRQGESIRWVASTESEHRARPTLLPRAVWVLLFSQGSGSFGSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPTPTRVSMTDLQRFCLDHSFGIRMIPADVVPEAPRKTKKDLGFDPLNLTSSPHGRRDAGEDAGPVLTPDDIRKWRAKFERLYAQE 266
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BLAST of mRNA_Ecto-sp6_S_contig9.18124.1 vs. uniprot
Match: D8LLX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX3_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 9.810e-93
Identity = 139/145 (95.86%), Postives = 142/145 (97.93%), Query Frame = 0 
Query:   50 MAAEGLPPGDHNNNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRGAGKRTPRQDESIRWVASTESGHRARSTLLPRAVWVLLFNQGSGPFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTDLQ 194
            MAAEGLPPGDH+NNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRGAGKRTPRQDESIRWVASTESGHRARSTLLPRAVWVL+FNQGSG FSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMT  +
Sbjct:    1 MAAEGLPPGDHSNNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRGAGKRTPRQDESIRWVASTESGHRARSTLLPRAVWVLIFNQGSGSFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTSFE 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB41_9PHAE1.390e-16188.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX3_ECTSI9.810e-9395.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 126..210
e-value: 1.3E-10
score: 41.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1158358..1161153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18124.1mRNA_Ecto-sp6_S_contig9.18124.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1158270..1162788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18124.1 ID=prot_Ecto-sp6_S_contig9.18124.1|Name=mRNA_Ecto-sp6_S_contig9.18124.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=268bp
MRYVCGIVPLVMIASGEAFVMPSALRLSAAVAPSARLLYSGQQGRRVVTM
AAEGLPPGDHNNNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRGAGKRTPR
QDESIRWVASTESGHRARSTLLPRAVWVLLFNQGSGPFSSSSEPQRGLYC
LWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTDLQRFCLDH
SFGIWMIPANVVPEAPRKTKKDLGFDPLNLASSPHGGRGAREEEGSVLTP
DDIRKWRAKFERLYTQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110