prot_Ecto-sp6_S_contig9.18079.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18079.1
Unique Nameprot_Ecto-sp6_S_contig9.18079.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length310
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18079.1 vs. uniprot
Match: D8LM09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM09_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 7.480e-201
Identity = 303/309 (98.06%), Postives = 304/309 (98.38%), Query Frame = 0
Query:    1 MRSYAVTAFFLAGVVESFHVSTVGRPHEFHSSRSSSKAGASVSPLRMGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADGAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPTEGIQQLERVDAMLDYKEAKAPKGGRAGRPFG 309
            MRSYAV AFFLA VVESFHVSTVGRPHEFHSSRSSS+AGASVSPL MGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAAD AGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALP EGIQQLERVDAMLDYKEAKAPKGGRAGRPFG
Sbjct:    1 MRSYAVAAFFLASVVESFHVSTVGRPHEFHSSRSSSRAGASVSPLLMGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPNEGIQQLERVDAMLDYKEAKAPKGGRAGRPFG 309          
BLAST of mRNA_Ecto-sp6_S_contig9.18079.1 vs. uniprot
Match: A0A836CAJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ8_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.610e-63
Identity = 107/213 (50.23%), Postives = 155/213 (72.77%), Query Frame = 0
Query:   92 QELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPTEGIQQLERVDAMLDYKEAKAPKGGRA 304
            ++++P + L ++ T  Q  R++ E Q+ L+ D   + G+LIARV+VSIK D + LG PD   FP +DT+DARLIV AFG+ GPPVA++R+ +KG +FP  +ELTADDLAFPLTK+ W  D+R++++IG+AV +D DG+ ATLD+  LTGYG+SKP+++G Q++RTEA V +  N  L+E+ + ALP+  I  LER+DA+LD KE+ A     A
Sbjct:   96 EDINPVQQLAQQATAEQVTRVRAEQQEVLRRDALREPGELIARVVVSIKSDAFPLGFPDVGPFPELDTEDARLIVTAFGRSGPPVASRRVPLKGLKFPALLELTADDLAFPLTKEVWLNDARAQDEIGVAVVLDVDGKLATLDAGDLTGYGISKPIKLGGQVQRTEAIVTVQVNKALEEKGQAALPSMEIAVLERIDALLDLKESIAATAAAA 308          
BLAST of mRNA_Ecto-sp6_S_contig9.18079.1 vs. uniprot
Match: A0A4D9DAT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAT9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.690e-21
Identity = 56/175 (32.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:  130 DLIARVLVSIKQ-DLYDLGAPDTTGFP--AVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPTEGIQQLERVDAMLDYKEAKAPKG 301
            D+IA+  V + + + Y LG P+  G    A++ D+A L++  +G++G PVAAK++ ++G QFP   ELT ++L FPLTK+ W  D+R+ +D+G++  +D DG+ +T +   L G+G+SKP+ I     R +A +++     +K+  ++          +R+ + +D + A+  +G
Sbjct:  147 DVIAKGTVRLPEIEGYPLG-PERPGVINYALENDNAALLITCYGREGGPVAAKKIQLRGLQFPYNFELTFNNLLFPLTKETWEKDNRAFDDLGISALLDLDGKFSTANENDLLGFGISKPVAIAGSQIRRDALIQVTPRTGVKQYTDEE---------QRLLSTIDLELARQAQG 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM09_ECTSI7.480e-20198.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAJ8_9STRA3.610e-6350.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DAT9_9STRA6.690e-2132.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:830394..834728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18079.1mRNA_Ecto-sp6_S_contig9.18079.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 830354..836305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18079.1 ID=prot_Ecto-sp6_S_contig9.18079.1|Name=mRNA_Ecto-sp6_S_contig9.18079.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=310bp
MRSYAVTAFFLAGVVESFHVSTVGRPHEFHSSRSSSKAGASVSPLRMGAP
SLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADGAGAQELSPAEML
VKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPD
TTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLA
FPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIG
AQLERTEAAVELVANPQLKERAEQALPTEGIQQLERVDAMLDYKEAKAPK
GGRAGRPFG*
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