prot_Ecto-sp6_S_contig9.18071.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18071.1
Unique Nameprot_Ecto-sp6_S_contig9.18071.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18071.1 vs. uniprot
Match: D8LM15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM15_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.040e-38
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 
Query:    1 MSHSMLSLPRVSVWHLTAPAMSGNVKLDTAILAPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
            MS S LSLP+ SVW+LTAPAMSGNVKLDT ILAPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA
Sbjct:    1 MSQSALSLPKASVWNLTAPAMSGNVKLDTVILAPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
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BLAST of mRNA_Ecto-sp6_S_contig9.18071.1 vs. uniprot
Match: A0A6H5KL14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL14_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.480e-23
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:   22 SGNVKLDTAILAPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
            +GNVKLDT  LAPRESFMRASLNSLQTRSWMTCWRGLA RWTPWSSA
Sbjct:   64 AGNVKLDTVFLAPRESFMRASLNSLQTRSWMTCWRGLARRWTPWSSA 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM15_ECTSI1.040e-3891.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL14_9PHAE1.480e-2391.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:764969..766231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18071.1mRNA_Ecto-sp6_S_contig9.18071.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 760785..767335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18071.1 ID=prot_Ecto-sp6_S_contig9.18071.1|Name=mRNA_Ecto-sp6_S_contig9.18071.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=69bp
MSHSMLSLPRVSVWHLTAPAMSGNVKLDTAILAPRESFMRASLNSLQTRS
WMTCWRGLAGRWTPWSSA*
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