prot_Ecto-sp6_S_contig9.18065.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18065.1
Unique Nameprot_Ecto-sp6_S_contig9.18065.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length392
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18065.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 478 bits (1230), Expect = 1.790e-165
Identity = 255/298 (85.57%), Postives = 259/298 (86.91%), Query Frame = 0 
Query:   80 QRHAGTGVTHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPFRRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPAFEFRDALLARLAAKEESLAGPDEHLRFQFARDVRDDPSLKTVAARVVAAAXXXXXXXXXARPGTSVGQRPAEAGAAAAA-PRGVMQQAKALELLRAVMSSLHRDGALHFLDRAKDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVHRMKKAGRSAQ 376
            +RHAGTG THRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPF+RDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDP FEFRDALLARLAAKEESLAGPDEHLRFQFARD                                    RPAEAGAAAAA PRGVMQQAKALELLRAVMSSLHRDGALHFLDRA+DVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACV+RMKKAGRSAQ
Sbjct:  127 ERHAGTGATHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPFQRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPTFEFRDALLARLAAKEESLAGPDEHLRFQFARD------------------------------------RPAEAGAAAAAAPRGVMQQAKALELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMKKAGRSAQ 388
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM21_ECTSI1.790e-16585.57Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 51..152
e-value: 1.9E-9
score: 39.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:698684..703558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18065.1mRNA_Ecto-sp6_S_contig9.18065.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 698544..703558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18065.1 ID=prot_Ecto-sp6_S_contig9.18065.1|Name=mRNA_Ecto-sp6_S_contig9.18065.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=392bp
MGPQSFVLELREAPHKGCARAGNPRGYRRLSRVARQQGHPPNRGFGRGGA
CQAGCDQGLRQLREVHTRRRDRAPAVHADQRHAGTGVTHRGHSERHELGE
LLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPF
RRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPAFEF
RDALLARLAAKEESLAGPDEHLRFQFARDVRDDPSLKTVAARVVAAAAAV
TAAATAARPGTSVGQRPAEAGAAAAAPRGVMQQAKALELLRAVMSSLHRD
GALHFLDRAKDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGS
ALLHHVPGARIRACVHRMKKAGRSAQQQQQQQQQQQQPESP*
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