prot_Ecto-sp6_S_contig9.18062.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18062.1
Unique Nameprot_Ecto-sp6_S_contig9.18062.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18062.1 vs. uniprot
Match: A0A6H5KRF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF4_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 9.020e-73
Identity = 123/131 (93.89%), Postives = 130/131 (99.24%), Query Frame = 0 
Query:    4 NQHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCENFTTRLQMPPEAMVGRSLLSIVDERDALSLRNAIFQVLNDAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGAHGLVVVTRLYSSGS 134
            ++HVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLC+NFT RLQMPPEAMVGRSLLSIVDER+ALSLRNAIFQVLN+AQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACG+HGL+VVTRLYSSGS
Sbjct:   48 SEHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCDNFTMRLQMPPEAMVGRSLLSIVDEREALSLRNAIFQVLNEAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLIVVTRLYSSGS 178
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BLAST of mRNA_Ecto-sp6_S_contig9.18062.1 vs. uniprot
Match: D8LCA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.700e-15
Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 0 
Query:    5 QHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCENFTTRLQMPPEAMVGRSLLSIVDERDALSLRNAIFQVLND----------------------------AQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGAHGLVVVTRL 129
            Q  ++L++ + IVE+GPDLFSLH  T+DAPFS++ ++   + Q+P E ++G+ L ++VD  D   L  A+  VL                                 XXXXXXX       VV + +  G   C ASMSIA G  GL+VVTR+
Sbjct:    8 QEEDVLEVYRDIVENGPDLFSLHGTTLDAPFSFVSKSLNLKFQLPSEYLLGKPLKTVVDPDDWGVLTTALLAVLGPNPTSGGKSGNSRDGGXXXXXXXXXXXXXXXXXXXXXXXVAVGSGTVVELNVMCGGASCLASMSIALGCRGLIVVTRM 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRF4_9PHAE9.020e-7393.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCA0_ECTSI2.700e-1535.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 8..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:675497..677351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18062.1mRNA_Ecto-sp6_S_contig9.18062.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 675497..677351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18062.1 ID=prot_Ecto-sp6_S_contig9.18062.1|Name=mRNA_Ecto-sp6_S_contig9.18062.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=135bp
MSTNQHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCENFTTRLQMPP
EAMVGRSLLSIVDERDALSLRNAIFQVLNDAQHHHHAGGGSDPPGGAVVH
VRIAHGQIFCEASMSIACGAHGLVVVTRLYSSGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf