prot_Ecto-sp6_S_contig9.18060.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18060.1
Unique Nameprot_Ecto-sp6_S_contig9.18060.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length35
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18060.1 vs. uniprot
Match: D8LM24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM24_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.210e-15
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0
Query:    1 MGYTWSHIKMHAARVSGWLPRDPIVGCDMADEM 33
            MGYTWS IKMHAARVSGWLPRDPIVGC+ ADEM
Sbjct:   10 MGYTWSDIKMHAARVSGWLPRDPIVGCNTADEM 42          
BLAST of mRNA_Ecto-sp6_S_contig9.18060.1 vs. uniprot
Match: A0A6H5K5C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.210e-9
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    1 MGYTWSHIKMHAARVSGWLPRDPIVGCDMADEM 33
            M YTWS IKMHAA VSGWL RDPIVGCD  +EM
Sbjct:  300 MRYTWSVIKMHAAPVSGWLCRDPIVGCDEDNEM 332          
BLAST of mRNA_Ecto-sp6_S_contig9.18060.1 vs. uniprot
Match: A0A6H5JQ60_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ60_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.240e-9
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    1 MGYTWSHIKMHAARVSGWLPRDPIVGCDMADEM 33
            M YTWS IKMHAA VSGWL RDPIVGCD  +EM
Sbjct:  295 MRYTWSVIKMHAAPVSGWLCRDPIVGCDEDNEM 327          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM24_ECTSI2.210e-1590.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5C0_9PHAE7.210e-978.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQ60_9PHAE7.240e-978.79Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:664402..664506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18060.1mRNA_Ecto-sp6_S_contig9.18060.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 663521..664509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18060.1 ID=prot_Ecto-sp6_S_contig9.18060.1|Name=mRNA_Ecto-sp6_S_contig9.18060.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=35bp
MGYTWSHIKMHAARVSGWLPRDPIVGCDMADEMT*
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