prot_Ecto-sp6_S_contig9.18053.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18053.1
Unique Nameprot_Ecto-sp6_S_contig9.18053.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1300
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18053.1 vs. uniprot
Match: A0A6H5KMM5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM5_9PHAE)

HSP 1 Score: 1619 bits (4192), Expect = 0.000e+0
Identity = 1040/1362 (76.36%), Postives = 1070/1362 (78.56%), Query Frame = 0
Query:   75 MASDEDKSHAPNGGGTPVLDTSWIDNSAVVAVASXXXXXXXXXXXXXXXXXXXRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXDQEFGGS-AELTILRPPPQRDTDAAVTSPGADSAAAISVPAPPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKK-SEGKQEPLGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSRPPNPVPAAPARTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSRGSSSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGGEPRLVSQPVRRESKEQKRGLVLRIK---PLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARRVAXXXXXXXXXXXXXXXACSETAVDGMMPGVEKSASSSAKGTAIAVACTSPTRAEAASKSRRDGEGLVADPATDACPAASGVTVEESPTEKESLPPGAAXXXXXXXXXXTPSKKIDGGGAVVAIEEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSNEAAVVDGAGQEEAMAEAL-------------------------------------------------------------------------------------------------------------------------------------GRDGAPLAACGNRVGSVSERVEEAVSAYSPRRGGQTPRIYTTGHPTSRNGGXXXXXXXXXXXXXXXXXXXSSPFVEQGQHEESLTGGTPGPGGMAWKASPFGVGSPFSAAAYGAGAPTVPPGAGVAVSPGQDDEEGAEEIAALEERLWSVVDAALREYHDGVALVRARRNHHAFATAAAASEAEKISSALSCVPDAGAAATPPPAAQVGETAASMTNSGLGPKEDAFASGLPAKAAPVATTPLTDDVDRTRAVAAPAAETVDTDGQPTPDSPLLPLLQLRLSEEEDDERFEYSRAWGGAGAEXXXXXXXXXXXXXQARGGKPRRRSLAKAFSSHKTRKEPKAHEGAGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRDQAEQSGQALSCPWDRRGIDEICPLQEN 1298
            MAS+EDKS+APNGGG PVLDTSWID+SAVVAVA                    RRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSG  XXXXX           DQEFGG  AE+TILRPPPQRDTDAAVTSPGADSAAAISVPA PSGSTASPDTDLPDPTAVADLFEAEEGTT A RPSPLGTLNNNETKPSSSSAPKK SEGKQ+PLGQASSAAVARGR SRRATFGGADARIRLEAENLAPVLPS+PPNPVPAA A TATRSPR MDGEVVGA EEQASGLSTA AA  TRPGDGEETQ+RV XXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLG+ HAEA       XXXXXXXXXXXXXXXXXXXXXXXXXX PS+GS+STTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCE AGDSMEWGLEG EPRLVSQPVRRESKEQKRGLVLRIK   PLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYK PYLRHVRDVRASRVREFAAA    XXXXXXXXXXXXXXXAC ETAVDGMMPGVEK ASSS KGTAI+VAC SPTRAEAASKSRR+GEGLVADPATDA  AAS VTV E    KESLPPGAA          TPSKKIDGGGAVVAI EGEARDD SG EEADVL +T+G TQE SPEAAAETPRT+T GE   VG TAAVA NAA IETLV SNEAAVVDGAG+E+AMAEAL                                                                                                                                     GRDGAPLAACGNRV S+SERVEEAVSAYSPRRGGQTP I  T +PTSRNGG                   SSPFVEQGQHEESL GGTPGPGG AWKAS FGVGSPFSAAAYGAGAPTVPP  GVAVSPGQDD EGAEEIAALEERLW+VVDAALREYHDGVALVR+RRNHHAFATA AASE E+ S+ALSCVPDAGAAATPPPAAQVGETAAS T+SGLG +E+A+ASGLPAKAAPV TTPLT DVDRTRAVAAPAA TV+ DGQPTPDSPLLPLLQLRLSEEEDDERFEYS AWGGAGA  XXXXXXXXXXXX+ARGGKPRRRSLAKAFSSHKTRKEPK HEGAGAR AAQ AG ESEARGDGVGGGKTT LTC     NACDTVMKPCQHSAC VCVDKLR Q EQSGQALSCPWDRRG+DEICPLQEN
Sbjct:    1 MASEEDKSNAPNGGGAPVLDTSWIDDSAVVAVAYGGDSGGVTRGRGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGGDXXXXXNHQKSRSPSSHDQEFGGGLAEVTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQDPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAARAPTATRSPRTMDGEVVGAVEEQASGLSTAIAAAATRPGDGEETQKRVXXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGEDHAEAETPNMPPXXXXXXXXXXXXXXXXXXXXXXXXXX-PSQGSTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKVGDPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKVPYLRHVRDVRASRVREFAAAXXXXXXXXXXXXXXXXXXXACRETAVDGMMPGVEKRASSSVKGTAISVACISPTRAEAASKSRRNGEGLVADPATDAFAAASRVTVGELAAAKESLPPGAASWGVDNNGD-TPSKKIDGGGAVVAIGEGEARDDVSGGEEADVLTITEGTTQEASPEAAAETPRTVTSGERLYVGVTAAVAKNAAAIETLVSSNEAAVVDGAGEEKAMAEALVRGEVQEVEDLEVWKDMTAPVVAGGGVETIRESAAGEVNLDSSPSSHGTPEAVVPHPLSARLREPHGDSGLETAAIHPPFSHGVPETHGVFVPEESSASRVPETSTPRVLATHGVVSPTTTSSVNAGSSGDEQGRDGAPLAACGNRVDSISERVEEAVSAYSPRRGGQTPMISATANPTSRNGGGSSVRVLGPPSSPPGSGGASSPFVEQGQHEESLGGGTPGPGGTAWKASHFGVGSPFSAAAYGAGAPTVPPAGGVAVSPGQDD-EGAEEIAALEERLWAVVDAALREYHDGVALVRSRRNHHAFATAGAASETEENSTALSCVPDAGAAATPPPAAQVGETAASRTSSGLGLEEEAYASGLPAKAAPVDTTPLTGDVDRTRAVAAPAAATVEHDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGGAGA--XXXXXXXXXXXXKARGGKPRRRSLAKAFSSHKTRKEPKVHEGAGARSAAQVAGIESEARGDGVGGGKTTRLTCXXXXXNACDTVMKPCQHSACSVCVDKLRSQGEQSGQALSCPWDRRGVDEICPLQEN 1357          
BLAST of mRNA_Ecto-sp6_S_contig9.18053.1 vs. uniprot
Match: D8LM31_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM31_ECTSI)

HSP 1 Score: 1404 bits (3633), Expect = 0.000e+0
Identity = 962/1228 (78.34%), Postives = 975/1228 (79.40%), Query Frame = 0
Query:   75 MASDEDKSHAPNGGGTPVLDTSWIDNSAVVAVASXXXXXXXXXXXXXXXXXXXRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXDQEFGGSA-ELTILRPPPQRDTDAAVTSPGADSAAAISVPAPPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKK-SEGKQEPLGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSRPPNPVPAAPARTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KPSRGSSSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGGEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARRVAXXXXXXXXXXXXXXXACSETAVDGMMPGVEKSASSSAKGTAIAVACTSPTRAEAASKSRRDGEGLVADPATDACPAASGVTVEESPTEKESLPPGAAXXXXXXXXXXTPSKKIDGGGAVVAIEEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSNEAAVVDGAGQEEAMAEALGRDGAPLAACGNRVGSVSERVEEAVSAYSPRRGGQTPRIYTTGHPTSRNGGXXXXXXXXXXXXXXXXXXXSSPFVEQGQHEESLTGGTPGPGGMAWKASPFGVGSPFSAAAYGAGAPTVPPGAGVAVSPGQDDEEGAEEIAALEERLWSVVDAALREYHDGVALVRARRNHHAFATAAAASEAEKISSALSCVPDAGAAATPPPAAQVGETAASMTNSGLGPKEDAFASGLPAKAAPVATTPLTDDVDRTRAVAAPAAETVDTDGQPTPDSPLLPLLQLRLSEEEDDERFEYSRAWGGAGAEXXXXXXXXXXXXXQARGGKPRRRSLAKAFSSHKTRKEPKAHEGAGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRDQAEQSGQALSCPWDRRGIDEICPLQENN 1299
            MAS+EDK HAPNGGGT VLDTSWIDNSAVVAV  XXXXXXXXXXXXXXXXXXXRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXX         ELTILRPPPQRDTDAAVTSPGADSAAAISVPA PSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKK SEGKQEP GQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPS+PPNPVPAAPA TATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KPSRG++STTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEG EPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAAR   XXXXXXXXXXXXXXXAC ETAVDGMMPGVEKSASSS KGTAI+VACTSPTRAEAASKSRRDGEGLVADPATDA PAASGVTVEESPTEKESL PGAA          TPSKKIDGGGAVVA+EEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPS+EAAVVDGAGQEEAMAEALGR                                           T++                                                                                                                                                              +VGE AASMT+SGLGPKEDA+ASGLPAKAAP ATTPLTDDV RTRAVAAPAA TVDTDGQPTPDSPLLPLLQLRLSEEEDDERFEYS AWG AGAE  XXXXXXXXX  QA GGK RRRSLAKAFSSHKTRKEPKAHEG GARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLR QAEQSGQALSCPWDRRG+DEI PLQE N
Sbjct:    1 MASEEDKRHAPNGGGTLVLDTSWIDNSAVVAVXXXXXXXXXXXXXXXXXXXXXRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKKKSEGKQEPRGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSRGNTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAAR---XXXXXXXXXXXXXXXACPETAVDGMMPGVEKSASSSVKGTAISVACTSPTRAEAASKSRRDGEGLVADPATDAFPAASGVTVEESPTEKESLLPGAALGGGVDNNGDTPSKKIDGGGAVVAVEEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSDEAAVVDGAGQEEAMAEALGR-------------------------------------------TTK--------------------------------------------------------------------------------------------------------------------------------------------------------------KVGEIAASMTSSGLGPKEDAYASGLPAKAAPAATTPLTDDVGRTRAVAAPAAATVDTDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWG-AGAEAGXXXXXXXXX--QA-GGKARRRSLAKAFSSHKTRKEPKAHEGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDEIRPLQEKN 1020          
BLAST of mRNA_Ecto-sp6_S_contig9.18053.1 vs. uniprot
Match: A0A835Z9P5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 8.300e-14
Identity = 63/166 (37.95%), Postives = 89/166 (53.61%), Query Frame = 0
Query:  503 LFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGD--------SMEWGLEGGE--------PRLVSQP--VRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDG-FCYEDR-ETGEPVEPGAYKGPYLRHVRDVRASRV 648
            L R +  A PG QRARR+AAR++CL+GY LSAVA  DA +LC             +++W  +           PRL + P  +R  S  QKR LVLR++P+ + M+ +   E+   E+ATG+   +A  DG + Y D    G  V P  Y   YL+H+  VRA R+
Sbjct:  328 LCREYAAATPGGQRARRIAARVYCLSGYPLSAVAATDAELLCAARXXXXXXXXXAALDWPTDPRRDDPAAPPLPRLDALPAAMRGASNAQKRALVLRLRPVLERMEASGSVERAALEAATGLACERA--DGMYRYRDGGRAGRIVAPALYAERYLQHLAAVRAERL 491          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMM5_9PHAE0.000e+076.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LM31_ECTSI0.000e+078.34RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z9P5_9STRA8.300e-1437.95RING-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1200..1299
e-value: 1.4E-5
score: 26.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1242..1286
score: 9.598
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1236..1295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:613724..619337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18053.1mRNA_Ecto-sp6_S_contig9.18053.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 613724..619337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18053.1 ID=prot_Ecto-sp6_S_contig9.18053.1|Name=mRNA_Ecto-sp6_S_contig9.18053.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1300bp
MRRDLRTGVAFLRRKTPRYSTVGHFHHNQCEGEERLRVSTGCSTPEVCNN
STGVSTQKLVPPAEEASRSQGYICMASDEDKSHAPNGGGTPVLDTSWIDN
SAVVAVASGGGSGGVTRGRGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPM
KYPSLPSSGGDDGGSSNHQQSSSPSSHDQEFGGSAELTILRPPPQRDTDA
AVTSPGADSAAAISVPAPPSGSTASPDTDLPDPTAVADLFEAEEGTTPAP
RPSPLGTLNNNETKPSSSSAPKKSEGKQEPLGQASSAAVARGRLSRRATF
GGADARIRLEAENLAPVLPSRPPNPVPAAPARTATRSPRAMDGEVVGAAE
EQASGLSTAAAAPVTRPGDGEETQERVPPPPPPAAATKKSRSRSSRRRSI
VMPCEAQPLMDSDLGDGHAEAETANMPPPPPPAPPATGGDGTAAAAAAPA
DGDGKPSRGSSSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTR
KRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDS
MEWGLEGGEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKA
ESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVRE
FAAARRVAAVAAAAAAAAAASSSACSETAVDGMMPGVEKSASSSAKGTAI
AVACTSPTRAEAASKSRRDGEGLVADPATDACPAASGVTVEESPTEKESL
PPGAASGGGVDNNGDTPSKKIDGGGAVVAIEEGEARDDASGAEEADVLAM
TDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSNEA
AVVDGAGQEEAMAEALGRDGAPLAACGNRVGSVSERVEEAVSAYSPRRGG
QTPRIYTTGHPTSRNGGGSSARVLGPSSSPPGGGGASSPFVEQGQHEESL
TGGTPGPGGMAWKASPFGVGSPFSAAAYGAGAPTVPPGAGVAVSPGQDDE
EGAEEIAALEERLWSVVDAALREYHDGVALVRARRNHHAFATAAAASEAE
KISSALSCVPDAGAAATPPPAAQVGETAASMTNSGLGPKEDAFASGLPAK
AAPVATTPLTDDVDRTRAVAAPAAETVDTDGQPTPDSPLLPLLQLRLSEE
EDDERFEYSRAWGGAGAEAGGGGGGGGGGSSQARGGKPRRRSLAKAFSSH
KTRKEPKAHEGAGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNAC
DTVMKPCQHSACGVCVDKLRDQAEQSGQALSCPWDRRGIDEICPLQENN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING