prot_Ecto-sp6_S_contig9.18031.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18031.1
Unique Name	prot_Ecto-sp6_S_contig9.18031.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	770

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI)

HSP 1 Score: 1369 bits (3544), Expect = 0.000e+0
Identity = 746/769 (97.01%), Postives = 752/769 (97.79%), Query Frame = 0

Query:    1 MTGKGVHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTNAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTVVEELPDEAEATLATPIPSPRAPTNAVSSVQSVSLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDKPKIATVEGSFTKTTTPGAATPSEVTDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKEVTEQASAGGEGNSLSRGAHPVKEEATCPSLEARTEGKELCAPTQTPQQGRPSTPAPACRAMAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGSVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 769
            MTGKG HDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQL+RKAMSESSS GNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRND ADGRPHI VNAANG GATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRS SRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQ+RAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEG+PPTV NAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQART+VEELPDEAEATLATPIP+PRAPTNAVSSVQSV LPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGD PKIATVEGS TKTTTPGAATPSE TDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAK VTEQASAGGE N+LSRG HPVKEEATCPSLEARTE KELCAPTQTPQQGRPSTPAPACRA AHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLG VLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC
Sbjct:    1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADGRPHINVNAANGGGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGVPPTVANAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHPVKEEATCPSLEARTEDKELCAPTQTPQQGRPSTPAPACRATAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 769

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD)

HSP 1 Score: 174 bits (440), Expect = 4.500e-43
Identity = 135/359 (37.60%), Postives = 187/359 (52.09%), Query Frame = 0

Query:   14 GPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK-THVRVE 371
            G  A+  +VQHQIR NA  +Q+Y +DL SWEKSI +++                 RA                            P +++            D  P        GDG + +   A +    AGHTYDKGY KWAKFD+DAALR  D++          S+ XXXXXXXXX        + A +V+ +          P    + T+ SR        E+ ERE GN  + +GD+  A+K YTRCLG N  +++  SNRAMA+LK +EFGKAE D + AL++DP H+KSL RR  ARN+LGKHR AL D + AAE+DP S+Q++  ++ T E ++T ++RAPK T  ++E
Sbjct:    5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRA----------------------------PRRRV--------QQATDATP------VEGDGDSANDKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADED----------STSXXXXXXXXXXXXXXXLSSKAVVVEETE---------PAAKASATTKSR--------EELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKRTQFKIE 294

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.910e-41
Identity = 127/344 (36.92%), Postives = 173/344 (50.29%), Query Frame = 0

Query:   22 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            VQHQIR NA  +Q+Y +DL +WEKSI K+D                +RA   T            P ++G  P P    +      +G  N+ ADG     VN           GK   S     HTYDKGY +W KFD+DAAL+  D++     + K +S                           ++S  L+  P P+  VA      +S S +  E+ E+E GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL D Q AA +DP S+Q++  +  T E ++T ++RAPK
Sbjct:   14 VQHQIRANASQLQDYFSDLYAWEKSIGKEDS-------------ARKRAAKTT----------KKPATAGATPPP----RGARGNGVGRNNEAADG-----VN-----------GKKPDS-----HTYDKGYNRWEKFDVDAALKEADED----ASTKTKSG--------------------------AASPPLQSSPVPRRVVA------ASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT)

HSP 1 Score: 166 bits (421), Expect = 7.530e-41
Identity = 122/347 (35.16%), Postives = 170/347 (48.99%), Query Frame = 0

Query:   22 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTS---TSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            +QHQIR NA  +Q+Y +DL +WEKSI K+D    R   +  SS           TPP  PP                                    P +      G G++ ++ +  S      HTYDKGY +W KFD+D AL+  D+E +    +K+                      P+ +V  S S             APT+   TS SS + +  E+ E+E+GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +E+  AE D   ALR DP H KS  RR  ARN+LGKHR AL D Q AA +DP S+Q++K L  T E ++T ++R+ K
Sbjct:    7 MQHQIRANASQLQDYFSDLYAWEKSIDKEDSMRKRATKTAKSSA----------TPPAAPP------------------------------------PRVATTV--GVGSSDENARTVSLKKLDAHTYDKGYKRWEKFDVDTALKEADEEGDCKQKNKQ----------------------PSALVQPSGS-------------APTAMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSK 270

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.150e-40
Identity = 121/354 (34.18%), Postives = 172/354 (48.59%), Query Frame = 0

Query:   12 KDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            K+   ++   VQHQIR NA  +Q+Y +DL +WE +I K++    R   +  SS+    A P                                              P +      G G+ G+   A +      HTYDKGY +W KFD+DAAL+  D  EE G+  K                  + + + +     S S  LR        VA TS + +S + +  E+ E+E+GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL D Q AA +DP S+Q++  L  T E ++T ++R+PK
Sbjct:   22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKENSARKRATKTAKSSVAANAAPP----------------------------------------------PRVATIV--GVGSNGEELYAGNEKKLDEHTYDKGYKRWDKFDVDAALKEAD--EEAGIRQK------------------SEQASASASEQSSGSAPLR--------VATTSKASTSSTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPK 299

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR)

HSP 1 Score: 159 bits (403), Expect = 3.730e-39
Identity = 118/348 (33.91%), Postives = 167/348 (47.99%), Query Frame = 0

Query:   18 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S        P T T         + V S      +   +KL A                                         HTYDKGY +W KFD+DAAL+  D++E     +K++S+             G  R+T  + +  +S+                    ++++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL D   AA +DP S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPTAIAAPPPRTAT--------IIGVDSNGEKVSTANEKKLDA-----------------------------------------HTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA------SGTGPSRVTATSNIPAAST--------------------TTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL)

HSP 1 Score: 161 bits (407), Expect = 7.610e-39
Identity = 124/352 (35.23%), Postives = 173/352 (49.15%), Query Frame = 0

Query:   18 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESS---SMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVA-PTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            +  +VQ QIR NA ++Q+Y +DL +WEK+I+KK++     AM++ +     G + A       PI  P +  PV          PT+K  A                                         HTYDKGY KW KFD+DAAL+  D +                      + Q     T  T +            P K  VA P   S  ++S  D+E+EE   GN  + +GD+  A+KSYTRCLG NS++++  SNRAMA LK +E+ KAE+D   AL++D  HVKS  RR  ARNALGKHR AL D + A E+DP SKQ+   ++ T E+++T ++RAPK
Sbjct:   16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKEEATKSTAMTKQNVPLPRGQKTAT--VSLTPISAPEAIAPVEG--------PTKKADA-----------------------------------------HTYDKGYKKWDKFDVDAALQEADGDHS-------------------AEKQSAQAETTTTSL------------PTKKVVAKPKIGSVPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN)

HSP 1 Score: 159 bits (403), Expect = 3.480e-38
Identity = 118/348 (33.91%), Postives = 167/348 (47.99%), Query Frame = 0

Query:   18 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S        P T T         + V S      +   +KL A                                         HTYDKGY +W KFD+DAAL+  D++E     +K++S+             G  R+T  + +  +S+                    ++++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL D   AA +DP S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPTAIAAPPPRTAT--------IIGVDSNGEKVSTANEKKLDA-----------------------------------------HTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA------SGTGPSRVTATSNIPAAST--------------------TTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A5D6XFC9_9STRA (RPAP3_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFC9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.300e-37
Identity = 117/347 (33.72%), Postives = 160/347 (46.11%), Query Frame = 0

Query:   18 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAP 364
            AA   QHQIR NA ++Q+Y +DL SWEK++++ ++   +   +   S G   A                PV S P P                                                  A HTYD+GY KWAKFD++AAL+  D   E+G   K                         + V  SSSR                           E+ ERE+GN  + +GDF  A+K YTRCLG +S++++  SNRAMA LK +EF KAE D + A++VDP H+KSL RRA ARNALGKHR AL D + AA +DP S+Q++  ++ T E L+  ++RAP
Sbjct:    8 AALETQHQIRANAAELQDYFSDLYSWEKTVERDEEARRQAKAARQPSAGGATAA--------------APVRSAPTP--------------------------------------------------AAHTYDRGYYKWAKFDVEAALKEAD---EDGHVTK-------------------------SAVAASSSR---------------------------EEIEREEGNAHYKRGDFVAAIKCYTRCLGYDSRNAVVLSNRAMAYLKNREFAKAEDDCNLAIQVDPSHLKSLSRRATARNALGKHRLALLDFERAAALDPKSRQLQNQIASTKELLRAAIKRAP 235

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BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM)

HSP 1 Score: 150 bits (378), Expect = 6.790e-35
Identity = 116/344 (33.72%), Postives = 158/344 (45.93%), Query Frame = 0

Query:   22 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 365
            VQHQIR NA  +Q+Y +DL +WEKSI K+D                +RA   T +    PP  T  V                                  V   N   ++G+ G A        HTYDKGY +W KFD+DAALR  D                           G     P  +V+ S +  +     P+               +  E+ E+E+GN  + +GD+  AVKSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ +P HVKS  RR  ARN+LGKHR AL D   AA +DP S+Q++  L  T + ++T ++R+PK
Sbjct:    9 VQHQIRSNASQLQDYFSDLYAWEKSIDKEDS-------------ARKRAARTTKSLDATPPPRTATV----------------------------------VGVGNNSESSGE-GDATDGKQPGAHTYDKGYKRWEKFDVDAALREAD---------------------------GGGSAVP--IVEDSPASSV-----PRRVXXXXXXXXXXXXTKSREELEKEEGNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHVKSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPK 270

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8F8_ECTSI	0.000e+0	97.01	RPAP3_C domain-containing protein n=2 Tax=Ectocarp...	[more]
K3WL17_GLOUD	4.500e-43	37.60	RPAP3_C domain-containing protein n=1 Tax=Globispo...	[more]
A0A6A4EVA2_9STRA	2.910e-41	36.92	RPAP3_C domain-containing protein n=4 Tax=Phytopht...	[more]
D0MU02_PHYIT	7.530e-41	35.16	RNA polymerase II-associated protein, putative n=1...	[more]
A0A329RPX3_9STRA	5.150e-40	34.18	RPAP3_C domain-containing protein n=2 Tax=Phytopht...	[more]
A0A081B1U1_PHYPR	3.730e-39	33.91	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
A0A8K1FBG6_PYTOL	7.610e-39	35.23	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
W2RGZ7_PHYPN	3.480e-38	33.91	RPAP3_C domain-containing protein n=11 Tax=Phytoph...	[more]
A0A5D6XFC9_9STRA	5.300e-37	33.72	RPAP3_C domain-containing protein n=1 Tax=Pythium ...	[more]
H3GE50_PHYRM	6.790e-35	33.72	RPAP3_C domain-containing protein n=1 Tax=Phytopht...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 241..274 e-value: 16.0 score: 13.2 coord: 275..308 e-value: 0.018 score: 24.2 coord: 309..342 e-value: 0.44 score: 19.6
IPR025986	RNA-polymerase II-associated protein 3-like, C-terminal domain	PFAM	PF13877	RPAP3_C	coord: 646..734 e-value: 1.9E-13 score: 50.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 233..372 e-value: 7.4E-34 score: 118.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 245..357
None	No IPR available	PANTHER	PTHR46423	FAMILY NOT NAMED	coord: 18..768
IPR019793	Peroxidases heam-ligand binding site	PROSITE	PS00435	PEROXIDASE_1	coord: 542..552
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 241..342 score: 17.008

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:430587..437182 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18031.1	mRNA_Ecto-sp6_S_contig9.18031.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 430587..437846 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18031.1 ID=prot_Ecto-sp6_S_contig9.18031.1|Name=mRNA_Ecto-sp6_S_contig9.18031.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=770bp
MTGKGVHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKK
DKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPT
QKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYD
KGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSSNSDSDTDSDKNQGTPR
LTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNT
KFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADA
ALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLS
KTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTN
AAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTVVE
ELPDEAEATLATPIPSPRAPTNAVSSVQSVSLPTASIAVAAQNERGGDAV
PRSYGRVDRDITVDPAGDKPKIATVEGSFTKTTTPGAATPSEVTDVAAAH
TVRPAVSTDLASKTGPPALSLVDVGAKEVTEQASAGGEGNSLSRGAHPVK
EEATCPSLEARTEGKELCAPTQTPQQGRPSTPAPACRAMAHALQLPTTGY
QFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGSVLQELG
KAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAA
SPTKVDPKDVDVLRKQFSC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR025986	RPAP3-like_C
IPR011990	TPR-like_helical_dom_sf
IPR019793	Peroxidases_heam-ligand_BS
IPR013026	TPR-contain_dom