mRNA_Ecto-sp6_S_contig9.18031.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18031.1
Unique NamemRNA_Ecto-sp6_S_contig9.18031.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI)

HSP 1 Score: 1369 bits (3544), Expect = 0.000e+0
Identity = 746/769 (97.01%), Postives = 752/769 (97.79%), Query Frame = 1
Query:    1 MTGKGVHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTNAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTVVEELPDEAEATLATPIPSPRAPTNAVSSVQSVSLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDKPKIATVEGSFTKTTTPGAATPSEVTDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKEVTEQASAGGEGNSLSRGAHPVKEEATCPSLEARTEGKELCAPTQTPQQGRPSTPAPACRAMAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGSVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 2307
            MTGKG HDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQL+RKAMSESSS GNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRND ADGRPHI VNAANG GATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRS SRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQ+RAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEG+PPTV NAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQART+VEELPDEAEATLATPIP+PRAPTNAVSSVQSV LPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGD PKIATVEGS TKTTTPGAATPSE TDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAK VTEQASAGGE N+LSRG HPVKEEATCPSLEARTE KELCAPTQTPQQGRPSTPAPACRA AHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLG VLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC
Sbjct:    1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADGRPHINVNAANGGGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGVPPTVANAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHPVKEEATCPSLEARTEDKELCAPTQTPQQGRPSTPAPACRATAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 769          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD)

HSP 1 Score: 174 bits (440), Expect = 1.320e-42
Identity = 135/359 (37.60%), Postives = 187/359 (52.09%), Query Frame = 1
Query:   40 GPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK-THVRVE 1113
            G  A+  +VQHQIR NA  +Q+Y +DL SWEKSI +++                 RA                            P +++            D  P        GDG + +   A +    AGHTYDKGY KWAKFD+DAALR  D++          S+ XXXXXXXXX        + A +V+ +          P    + T+ SR        E+ ERE GN  + +GD+  A+K YTRCLG N  +++  SNRAMA+LK +EFGKAE D + AL++DP H+KSL RR  ARN+LGKHR AL D + AAE+DP S+Q++  ++ T E ++T ++RAPK T  ++E
Sbjct:    5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRA----------------------------PRRRV--------QQATDATP------VEGDGDSANDKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADED----------STSXXXXXXXXXXXXXXXLSSKAVVVEETE---------PAAKASATTKSR--------EELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKRTQFKIE 294          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 7.520e-41
Identity = 127/344 (36.92%), Postives = 173/344 (50.29%), Query Frame = 1
Query:   64 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            VQHQIR NA  +Q+Y +DL +WEKSI K+D                +RA   T            P ++G  P P    +      +G  N+ ADG     VN           GK   S     HTYDKGY +W KFD+DAAL+  D++     + K +S                           ++S  L+  P P+  VA      +S S +  E+ E+E GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL D Q AA +DP S+Q++  +  T E ++T ++RAPK
Sbjct:   14 VQHQIRANASQLQDYFSDLYAWEKSIGKEDS-------------ARKRAAKTT----------KKPATAGATPPP----RGARGNGVGRNNEAADG-----VN-----------GKKPDS-----HTYDKGYNRWEKFDVDAALKEADED----ASTKTKSG--------------------------AASPPLQSSPVPRRVVA------ASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT)

HSP 1 Score: 166 bits (421), Expect = 1.840e-40
Identity = 122/347 (35.16%), Postives = 170/347 (48.99%), Query Frame = 1
Query:   64 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTS---TSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            +QHQIR NA  +Q+Y +DL +WEKSI K+D    R   +  SS           TPP  PP                                    P +      G G++ ++ +  S      HTYDKGY +W KFD+D AL+  D+E +    +K+                      P+ +V  S S             APT+   TS SS + +  E+ E+E+GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +E+  AE D   ALR DP H KS  RR  ARN+LGKHR AL D Q AA +DP S+Q++K L  T E ++T ++R+ K
Sbjct:    7 MQHQIRANASQLQDYFSDLYAWEKSIDKEDSMRKRATKTAKSSA----------TPPAAPP------------------------------------PRVATTV--GVGSSDENARTVSLKKLDAHTYDKGYKRWEKFDVDTALKEADEEGDCKQKNKQ----------------------PSALVQPSGS-------------APTAMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSK 270          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.260e-39
Identity = 121/354 (34.18%), Postives = 172/354 (48.59%), Query Frame = 1
Query:   34 KDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            K+   ++   VQHQIR NA  +Q+Y +DL +WE +I K++    R   +  SS+    A P                                              P +      G G+ G+   A +      HTYDKGY +W KFD+DAAL+  D  EE G+  K                  + + + +     S S  LR        VA TS + +S + +  E+ E+E+GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL D Q AA +DP S+Q++  L  T E ++T ++R+PK
Sbjct:   22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKENSARKRATKTAKSSVAANAAPP----------------------------------------------PRVATIV--GVGSNGEELYAGNEKKLDEHTYDKGYKRWDKFDVDAALKEAD--EEAGIRQK------------------SEQASASASEQSSGSAPLR--------VATTSKASTSSTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPK 299          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR)

HSP 1 Score: 159 bits (403), Expect = 7.740e-39
Identity = 118/348 (33.91%), Postives = 167/348 (47.99%), Query Frame = 1
Query:   52 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S        P T T         + V S      +   +KL A                                         HTYDKGY +W KFD+DAAL+  D++E     +K++S+             G  R+T  + +  +S+                    ++++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL D   AA +DP S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPTAIAAPPPRTAT--------IIGVDSNGEKVSTANEKKLDA-----------------------------------------HTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA------SGTGPSRVTATSNIPAAST--------------------TTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL)

HSP 1 Score: 161 bits (407), Expect = 1.690e-38
Identity = 124/352 (35.23%), Postives = 173/352 (49.15%), Query Frame = 1
Query:   52 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESS---SMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVA-PTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            +  +VQ QIR NA ++Q+Y +DL +WEK+I+KK++     AM++ +     G + A       PI  P +  PV          PT+K  A                                         HTYDKGY KW KFD+DAAL+  D +                      + Q     T  T +            P K  VA P   S  ++S  D+E+EE   GN  + +GD+  A+KSYTRCLG NS++++  SNRAMA LK +E+ KAE+D   AL++D  HVKS  RR  ARNALGKHR AL D + A E+DP SKQ+   ++ T E+++T ++RAPK
Sbjct:   16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKEEATKSTAMTKQNVPLPRGQKTAT--VSLTPISAPEAIAPVEG--------PTKKADA-----------------------------------------HTYDKGYKKWDKFDVDAALQEADGDHS-------------------AEKQSAQAETTTTSL------------PTKKVVAKPKIGSVPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN)

HSP 1 Score: 159 bits (403), Expect = 7.570e-38
Identity = 118/348 (33.91%), Postives = 167/348 (47.99%), Query Frame = 1
Query:   52 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S        P T T         + V S      +   +KL A                                         HTYDKGY +W KFD+DAAL+  D++E     +K++S+             G  R+T  + +  +S+                    ++++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL D   AA +DP S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPTAIAAPPPRTAT--------IIGVDSNGEKVSTANEKKLDA-----------------------------------------HTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA------SGTGPSRVTATSNIPAAST--------------------TTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: A0A5D6XFC9_9STRA (RPAP3_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFC9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.070e-36
Identity = 117/347 (33.72%), Postives = 160/347 (46.11%), Query Frame = 1
Query:   52 AAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAP 1092
            AA   QHQIR NA ++Q+Y +DL SWEK++++ ++   +   +   S G   A                PV S P P                                                  A HTYD+GY KWAKFD++AAL+  D   E+G   K                         + V  SSSR                           E+ ERE+GN  + +GDF  A+K YTRCLG +S++++  SNRAMA LK +EF KAE D + A++VDP H+KSL RRA ARNALGKHR AL D + AA +DP S+Q++  ++ T E L+  ++RAP
Sbjct:    8 AALETQHQIRANAAELQDYFSDLYSWEKTVERDEEARRQAKAARQPSAGGATAA--------------APVRSAPTP--------------------------------------------------AAHTYDRGYYKWAKFDVEAALKEAD---EDGHVTK-------------------------SAVAASSSR---------------------------EEIEREEGNAHYKRGDFVAAIKCYTRCLGYDSRNAVVLSNRAMAYLKNREFAKAEDDCNLAIQVDPSHLKSLSRRATARNALGKHRLALLDFERAAALDPKSRQLQNQIASTKELLRAAIKRAP 235          
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM)

HSP 1 Score: 150 bits (378), Expect = 1.280e-34
Identity = 116/344 (33.72%), Postives = 158/344 (45.93%), Query Frame = 1
Query:   64 VQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPK 1095
            VQHQIR NA  +Q+Y +DL +WEKSI K+D                +RA   T +    PP  T  V                                  V   N   ++G+ G A        HTYDKGY +W KFD+DAALR  D                           G     P  +V+ S +  +     P+               +  E+ E+E+GN  + +GD+  AVKSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ +P HVKS  RR  ARN+LGKHR AL D   AA +DP S+Q++  L  T + ++T ++R+PK
Sbjct:    9 VQHQIRSNASQLQDYFSDLYAWEKSIDKEDS-------------ARKRAARTTKSLDATPPPRTATV----------------------------------VGVGNNSESSGE-GDATDGKQPGAHTYDKGYKRWEKFDVDAALREAD---------------------------GGGSAVP--IVEDSPASSV-----PRRVXXXXXXXXXXXXTKSREELEKEEGNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHVKSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPK 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8F8_ECTSI0.000e+097.01RPAP3_C domain-containing protein n=2 Tax=Ectocarp... [more]
K3WL17_GLOUD1.320e-4237.60RPAP3_C domain-containing protein n=1 Tax=Globispo... [more]
A0A6A4EVA2_9STRA7.520e-4136.92RPAP3_C domain-containing protein n=4 Tax=Phytopht... [more]
D0MU02_PHYIT1.840e-4035.16RNA polymerase II-associated protein, putative n=1... [more]
A0A329RPX3_9STRA1.260e-3934.18RPAP3_C domain-containing protein n=2 Tax=Phytopht... [more]
A0A081B1U1_PHYPR7.740e-3933.91Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A8K1FBG6_PYTOL1.690e-3835.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2RGZ7_PHYPN7.570e-3833.91RPAP3_C domain-containing protein n=11 Tax=Phytoph... [more]
A0A5D6XFC9_9STRA1.070e-3633.72RPAP3_C domain-containing protein n=1 Tax=Pythium ... [more]
H3GE50_PHYRM1.280e-3433.72RPAP3_C domain-containing protein n=1 Tax=Phytopht... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:430587..437846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1395.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G8F8
Model size2974
KEGG koko:K19870
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.response to arachidonic acid
EggNOG OGsCOG0639@1,KOG0376@2759
Ec32 ortholog descriptionRNA-polymerase II-associated protein 3-like, C-terminal domain
Ec32 orthologEc-14_002880.1
Cds size2310
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18031.1prot_Ecto-sp6_S_contig9.18031.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 430587..437182 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350519.9924073-CDS-Ecto-sp6_S_contig9:430586..4307411682350519.9924073-CDS-Ecto-sp6_S_contig9:430586..430741Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 430587..430741 +
1682350520.0041747-CDS-Ecto-sp6_S_contig9:432757..4331391682350520.0041747-CDS-Ecto-sp6_S_contig9:432757..433139Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 432758..433139 +
1682350520.0136712-CDS-Ecto-sp6_S_contig9:433266..4335261682350520.0136712-CDS-Ecto-sp6_S_contig9:433266..433526Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 433267..433526 +
1682350520.0236354-CDS-Ecto-sp6_S_contig9:434049..4341131682350520.0236354-CDS-Ecto-sp6_S_contig9:434049..434113Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 434050..434113 +
1682350520.0331202-CDS-Ecto-sp6_S_contig9:435297..4354681682350520.0331202-CDS-Ecto-sp6_S_contig9:435297..435468Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 435298..435468 +
1682350520.04234-CDS-Ecto-sp6_S_contig9:435904..4371821682350520.04234-CDS-Ecto-sp6_S_contig9:435904..437182Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 435905..437182 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350520.0522368-UTR-Ecto-sp6_S_contig9:437182..4378461682350520.0522368-UTR-Ecto-sp6_S_contig9:437182..437846Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 437183..437846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18031.1

>prot_Ecto-sp6_S_contig9.18031.1 ID=prot_Ecto-sp6_S_contig9.18031.1|Name=mRNA_Ecto-sp6_S_contig9.18031.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=770bp
MTGKGVHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKK
DKQLARKAMSESSSMGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPT
QKLSAKSLGCRNDRADGRPHITVNAANGDGATGDSGKAKSSMSAAGHTYD
KGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSSNSDSDTDSDKNQGTPR
LTPATMVDRSSSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNT
KFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADA
ALRVDPRHVKSLQRRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLS
KTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTN
AAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTVVE
ELPDEAEATLATPIPSPRAPTNAVSSVQSVSLPTASIAVAAQNERGGDAV
PRSYGRVDRDITVDPAGDKPKIATVEGSFTKTTTPGAATPSEVTDVAAAH
TVRPAVSTDLASKTGPPALSLVDVGAKEVTEQASAGGEGNSLSRGAHPVK
EEATCPSLEARTEGKELCAPTQTPQQGRPSTPAPACRAMAHALQLPTTGY
QFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGSVLQELG
KAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAA
SPTKVDPKDVDVLRKQFSC*
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mRNA from alignment at Ecto-sp6_S_contig9:430587..437846+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18031.1 ID=mRNA_Ecto-sp6_S_contig9.18031.1|Name=mRNA_Ecto-sp6_S_contig9.18031.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7260bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:430587..437846+ (Ectocarpus species6 EcLAC_371)
ATGACCGGGAAAGGCGTTCATGACGCGTATGGTAAGGATGGACCCGGTGC GGCTGCGTTTCGTGTCCAGCATCAGATACGGCGAAATGCTCAGGACATGC AAGAGTATCTTACCGACCTCAGCAGCTGGGAGAAGTCTATAAAGAAGAAG GACAAGTGAGTGGGGACCCTGTGCTCGAACGTTGCGTTTGTCAATCTCAC CCCCTGGTCTGTGCTGAAAGCCGGTTAATTACCATCCGATTCGTGCTCTA CCAACGGTGGTAAGAATGATTGACAAAAAGGGCGGTCGTTTCAAGGCCGG GGAATACTAGGGTGGGCGCCGAACGTGCTATAATACTATTACATACGTAG ATCAACCAAGATTTTGAATCCAGCCCACAAGCCCGCTGACCACAGCAGCT CAGTATTTCCTTTAGGTTGTAGGTTGTACACAAATAGGATTAGTACTACA GCCACACCGTAGTGATGGCGCCTTCGGGCGCATTTCCAGTCAACAACGAG CTCGGTCAGTGGCCCAAAAAAGCATGGAGCCTTTATATCCTCCGCAGCAC CCCCGTACTTGTTTGCCTCTTCAGATGAGATTTACCCGCCGACTTTCGTT CCCTCTCTCGCTTCCATCGAATGCCGGCCGGCCGGCTGAGTGTACTCTCT GATACCAATCCGGAAGTTTAACCTTGCGTCTGTTGAATATCACCACCGCT GTGGTGTGCATGGCGGTATCTACCGCTCAGTACAAAGCCGAACAGAGGCC CCCGAAGTCGATGTTTTTCCAACGCCCTGCTGTTTGGATTCGTCAATACA GGCAATCATTCGTGGTTCCGTTATTACACAGTGTACCGAGAAGAGGGGGT TCCGTTATAAAAGAGGGCCGGTGTACTTTAAATAGCGACCGGCCCTTTAT AGTGGACTGGCCCCACTATAAGCTAGTCAGTTCAGGTGCACCTGTGTGTG GCTCGCTCGGCTCCTTTACACACGCACACATAGCGGCCCCAACCACACCG GTAGCTGCATACGTGCGATATGCCATGCGCGGCTGGTGTCGTACCCTGGA TGTCATGATTAAATGTTTTCCAACGCACTTCTGTTTGGATTCGTCAATAC TTCGGAGTATTATTGTATTATACCAGTATTTTTCAAGCTACTGCTGTAAG GGTTCAGATTATAAGGGAAGCCCCGGTCTGTCTGAAACATGTTGCTTAAT CTGAAAACCGTTTTTTGCATGGGAGAATGACGTTGGAAATGGCTTTTTTG AAGCTTGTCTCGCTCTTGGAAATTTTCAGAAGTATCTCCCGTGCGTAGGC AGTCTCCCGTGCGTAGGCAGAGGCGCTAGGCCCACCCTAGGCACACACAG CAAGGCAAGCATTTTCACCAGCCCTAGAGCTACAGATAGGAGCGTTTCGG ACTAAATAGCGCGCGCGCTACGCGCGTGTACAAGAAAGTCTGCAATTTGA CAGACCATTTGGCCGTTGAACACAGCAACACAACAAGCAGCAAGGAATCG CGTACGCTGCTGTTCATGGGTAGACAGGCAGCCACACAATGGGCACACAT AGATGCCCTTGCCGCAACTTTTTTTTTTTAATGCGTGCCAAGAGTAAACG GATCTGCATGAAGTCTGTGCTCTGGATGTTTTGTGTGTGAGGCACCAGGC TAAAATGCAAACTTTGTCGTGGCCTCGAGATGATACACGGGTGATTTTGG ATTTGTCGGGTGTGCACAGCAGTTTTGTGTTCGTAGCGTCTGCCGTTGTC CAGCCACCAGAGACAATGTGGGCGTAAATTCCGTACAGAGAGAGGCGCTC CTCCGGCATACATCTATTATATACATCGCATCTTTGGCATCCAGGACTGG TCCCAACAACGTTGCTTTCCATGTAGTTCTGAAAGTATTATTTTTTAGTT CGACAAGTCAAGCTCCAGTCCGAACCTGCTGTGTAATAGTCCGAGTATTT CATCTGCTCCCTCCGACCAGCTACTGTGGCCATGAGGGACACCCCGAAAG GTGTTGTTGCGCTGAACAGCTGTTGTGCTGCACTTCTGTAGGGAAACCTT GTATGATGAAACATCATCCGACGTTTCTTAACCTCTGTTCCTTACAAAGT ACCGTTTGCTGGCGGTATGAATGCCATGTCCGTCTAATGTATGCTTTTGG CGAAATTCTCTGAAAATGCAGGCAGCTTGCTCGAAAGGCTATGTCTGAAT CGTCTTCAATGGGTAATCGACGAGCCATCCCCGACACCGGCACGCCCCCG ATCCGCCCCCCCGGAAGTACGGTCCCTGTAAGCTCTGGCCCTGCGCCCCA ACCTTCCCAACCAACGCAAAAGCTTTCGGCGAAGAGCCTGGGATGTCGAA ACGATAGGGCTGACGGTAGGCCGCACATCACCGTGAACGCTGCAAACGGC GATGGGGCGACGGGAGACTCGGGCAAGGCCAAGTCCAGCATGTCGGCTGC AGGGCACACGTATGATAAGGGATACGGAAAATGGGCCAAGTTCGACATCG ACGCCGCTCTTCGATCTGTTGATCAGGAGGAGGAGGAGGGAGTAAATGAT AAGGTAGAGTGCCATGTTGACAAAGCAGACTTCTGTAGAAGGTGTCGCGG CTGATTGTATGCGATCATTGGCACGTGCGTGGCGTGAAACCTTGATATGC CCCTTCACTGCACACCCGCACGACGATCAGAGACGCTCGAGCAGCAATAG CGATAGCGACACGGACAGCGACAAGAATCAGGGGACTCCAAGGCTCACTC CGGCAACCATGGTCGATCGGTCCAGCAGTCGAGGCCTCCGTCGTCCTCCT CCGCCTAAGCACACGGTGGCACCAACCTCAACATCCCGATCAAGTCAGTC GCCGAGAGACTTGGAGAAGGAAGAGCGGGAAAAAGGGAATACGAAGTTCG GCCAGGGTGACTTTGAGGGGGCTGTGAAGAGCTATACGAGGTAGGCAGAA TAGGGGGTGCTAGCAGGTGAGGTACGGTCTCAAGCTCACAACATACCATC GACAGCGGTAGGTGCAAATCGCATGTTGATGTATTTTACTCCTAATAGTA TAAAACACACTCAGCGTCTTGTTTTGGTCGCCACTACAGCAGTCGTAAGG CAAGGCAGTGGGCCAGACCACGACACACTCCTGCGACTCAAGCACCAACC GTTCAGGAGTCAAAATTTTGTTGACGACTTTGTGCCATTAGATGTAGCAG GTGGATAGTGGAAATTCCTCCCTTCTTTTTCGTGACTAACTTACAAATTT ACGTTATCACCCGGAACATCACCTGCACATATGAAGAACGCACGACCACA CGTTGCCATCCGTCCATGGCAGGACTACTCACGTTCCAATAGGTTTCCAA AGGTTAGGGCGTCGATGCTGTGTCGCAGGACTCGCGAGAGAACACTTCGC GCGGTAGGCGCCTATATGAATTTGCGGTTCACCCGGCCTTCTCGACGCTG CCTGCTTGTCCAGGTGCCTGGGCATGAACAGCAAGAGCTCGCTGGCTTTC TCGAACAGGGCTATGGCGAACCTCAAGGTTTGTAAGCGGCCTAGAACGCA ACGGGCTTTTATGCAAATGATACCCGGCAGGAGTGAGTCAGTGCAGAACG GCGTTTGCGAAATCGCATAGCCAATGCCGTTTACTGCTGTGGATTTGTTC TGTTTGCAGCTTTGCCTGTTGGGCGTGCGTTTTTCTGTCTCTCCGTGCCG ATGTTTTGAAGCAGCTTGGACGATCCCAAGCGCAGAGGAGGAATTTCGCT ACGTGGCGCTCGTATTTCCACCATGTTGAAGCCTGTGCCCTCTGTAGTTT TTATACCTGTCCCCCCCCCCCCGATGTTTGCCATCGGGGTTGGGTTTTCG TCGCTTGGCAACGACGTTGTAAAACGTGCTGCCCCCCCCGGTGTTTGCCA TCGGGGTTGGGTTTTCGTCGCTTGGCAGCGATGTTGTATAACGTGCCGCC CCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAGCGACG TTGTAAAACGTGCCGCCCCCCCTGGTGTTTGCCATCGGGATTGGGTTTTC GTCGCTTGGCAGCGATGTTGTAAAACAAGCCGATCACTTCGTGAGCTCAA CAACCAGGTTACCGCTTTTTTTTTTACCTCTGGTGTTTTTTTTGGGCGGT AACCATGAATGGTGGTCGAGTTGATTCTGTTGTGCGGGGTCGAGAACCCT CACTCCGCGCAAAGGGGACAATCGCACCATGTTGTGTTACAGTGGTCAAG CACCCTCGAGGCAGTTACACAGTGATTATAACTGTCTCTGGAAGTGAAAG CACCAGAAAATAAATTAAGTCATACGCAGCTGTCATCCGTACGCAATGAA GTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCTCACCCTTCAT GCGACTCGCCGAATACCTCACGGTGCTTCGCGCTTGGTGATGTGAGAGCC TGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGA GGTCAATGGTCAAACGACTACGGCATGCACGACTATGAGTACACCCCCCC CCCTGTGGCAGTTTGGCACTACCAACGTCAAGGAGCTGGATCAATGTGAT GTGTGCACTTTGGCGTTCTGTGGCAAGCGCTTGTCTGCCATGCCCATCGC TGACACCACCACCTCCATCGCTGCCTCTACTACAATCTGTGAATTAAATG AATCACCACAGCTGAAGGAGTTCGGGAAGGCAGAATCCGATGCCGATGCG GCCTTGAGGGTGGATCCGCGCCACGTTAAATCTCTCCAGCGGCGAGCAGC GGCGAGGAACGCTCTTGGGAAGCACCGTGCTGCGCTGGGTGACCTGCAAA CAGCAGCGGAAATCGATCCAACCTCGAAGCAGGTGCGTAAAGGAGGGCTT TTGTTTGGGGCAAAGGACGATGCATTGCAATTTTTATTTTGAATTGGGTG CCAAGAGGTGCACGTCGGTTCCTCCTTCCAGAGAATGATTCGCCACTGCG TATTTCGCACAATGTTGCCGCTCGTCGGTAGTGGACTTTTGACTGCATTC TTGGGTGAAGCAGGTCGTTGACTGGATTATTGCTACGGTGGGTTCGCTGT TGGTAACAATGTCTGAGCGGTAGTGAGTTTGTTTTTTAACCCGAGGGTGG TTGAGTGCTGCGCACAGCTGATGTGGCGTTGTATATTTTTAACCCCAAGG GTGGTTGAGTGCTGTGCATAACGTATGTGGCGCTGCAGCGTGTCGAAACT TATCTTGTTGTTCCACGCTGCGCATGTGCTCCAAAGTTGCCCTACTGGCT TCACCTTCAAACGTGCAGGTTCGAAAAGACCTCAGCAAAACGCTGGAAAC TTTGAAGACAGTTGTGCGCCGTGCGCCGAAGACGCATGTTCGGGTGGAGA GCTTCCCTCTCCCTGCCCCCAAGCCTCGTGGGTACTCTCAACCAGGCACA CCTATTGAAGAGGGTCTTCCACCCACCGTAACAAACGCTGCCGTATCCGC CACAAATCACAATGCTTCAGTGACCGGGGATGAGGACACAGCTGCGCCGT ATTCCTCAGTGTTGCAAGAGAGCACGGACAAGCGTGCCACCAATGAGGCC ACCGTCTACTCGTATCAAGCACGGACAGTTGTCGAAGAGCTCCCTGATGA AGCGGAGGCCACCCTGGCTACTCCCATACCTTCACCACGAGCACCCACGA ACGCAGTATCGTCAGTGCAAAGTGTCTCGTTGCCAACGGCTTCGATCGCG GTGGCCGCTCAGAATGAGCGAGGAGGGGACGCCGTACCACGTTCTTACGG CAGGGTAGATCGGGATATTACGGTAGACCCAGCAGGAGATAAACCAAAGA TTGCTACCGTAGAAGGTAGTTTCACTAAGACGACAACGCCAGGGGCCGCA ACACCATCAGAAGTGACCGACGTCGCTGCAGCGCATACAGTCCGCCCGGC AGTCTCAACGGATTTGGCGTCGAAAACGGGCCCGCCCGCGCTCTCGCTCG TGGATGTTGGCGCGAAAGAGGTGACTGAGCAAGCAAGTGCCGGTGGCGAG GGCAATAGTCTGTCTCGAGGAGCTCATCCTGTGAAAGAGGAGGCAACCTG CCCGTCGCTTGAGGCGAGAACGGAAGGCAAGGAGCTATGTGCGCCGACCC AAACACCCCAGCAGGGTAGGCCGTCTACTCCCGCTCCCGCTTGTAGGGCG ATGGCTCACGCGCTGCAGCTACCCACCACGGGCTACCAGTTTGAAAGTAT GTGGCGCGGCACAGATGGGTCGCCTGAAGGACGGCTTGAGCTGCTGCGGG CCGTCCCGCCATCGACTATCGCCAAAATCTTCCGCCGAACCCCTATCGAA GTAGAGTTGTTGGGCAGCGTTTTGCAAGAACTGGGAAAGGCTTTTCTGCC CAGGAGGCCGGCAACGGCTCTGCGGTGGCTCAAGAGCCTTTCTAAAGCGT CTCGGTTCAGCATGACGGTGGCCCTTCTCGGCGAAGAGGACGGTCGCGCA GCCGCGCGAGAAGTGCTAAGGCGGCTTGAGGCAGCATCGCCGACGAAAGT GGACCCAAAAGATGTTGATGTCTTGAGGAAGCAGTTCTCGTGTTAGAAGC GCGTGGTCCAATAGAATGTGGGTGGAGAGGTGACGAGGGAAGTGTGACGG GAGGTGTGCATACCAAGACAGGTACTAGTACTTTTGAGGGAAGCCGATTT CAGGAGTCTTGAAATTTTGTTTTGGTTGGTGCAACACCTTTGCGAGAGAA GATTGTTTTCACCTTTGGGTGCGTCGGAATGTGCCCACGCTGTGCTTTTG AGCAGGCAATATTGTTGAGCACGAGCTGTTGGCAACACCAGAAAAAGATA TGGCGGCCAGAGTGAATCAGCCGAGGTTACCCGCCTCCTCCCGTTTGTTT GTTCATATTACGTGTGCCGTGGAACTGCTGTGGTTGTCACGAGCGTCACG GTGAACCAGCACATGTTCGAGTGCAGGACTACTCGTGCTTGATGATCATG CCGAGCTCCTCCCTTCTAGTGGTTGACGTTATTTGGGCATGAGATGGCCT CAGAGGCTCCAGTGTTTGATTACTGGAAAATCCCCTCATTAAAAATTGTC AAGAGAAGGGTTGGCCGTTCGTATTGATTGAGTACGGTCCGGGGTGGCAC AATGACACATCAATCATTTCGGGTCACGGATGAGACTTTTCCAAGCAAAG GTAAATCATGTTAGGATGTTTTGAGCGGAGCCTCCCTGTTTACCCGGTTT AGAGATGCCG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:430587..437846+

>mRNA_Ecto-sp6_S_contig9.18031.1 ID=mRNA_Ecto-sp6_S_contig9.18031.1|Name=mRNA_Ecto-sp6_S_contig9.18031.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2310bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:430587..437846+ (Ectocarpus species6 EcLAC_371)
ATGACCGGGAAAGGCGTTCATGACGCGTATGGTAAGGATGGACCCGGTGC
GGCTGCGTTTCGTGTCCAGCATCAGATACGGCGAAATGCTCAGGACATGC
AAGAGTATCTTACCGACCTCAGCAGCTGGGAGAAGTCTATAAAGAAGAAG
GACAAGCAGCTTGCTCGAAAGGCTATGTCTGAATCGTCTTCAATGGGTAA
TCGACGAGCCATCCCCGACACCGGCACGCCCCCGATCCGCCCCCCCGGAA
GTACGGTCCCTGTAAGCTCTGGCCCTGCGCCCCAACCTTCCCAACCAACG
CAAAAGCTTTCGGCGAAGAGCCTGGGATGTCGAAACGATAGGGCTGACGG
TAGGCCGCACATCACCGTGAACGCTGCAAACGGCGATGGGGCGACGGGAG
ACTCGGGCAAGGCCAAGTCCAGCATGTCGGCTGCAGGGCACACGTATGAT
AAGGGATACGGAAAATGGGCCAAGTTCGACATCGACGCCGCTCTTCGATC
TGTTGATCAGGAGGAGGAGGAGGGAGTAAATGATAAGAGACGCTCGAGCA
GCAATAGCGATAGCGACACGGACAGCGACAAGAATCAGGGGACTCCAAGG
CTCACTCCGGCAACCATGGTCGATCGGTCCAGCAGTCGAGGCCTCCGTCG
TCCTCCTCCGCCTAAGCACACGGTGGCACCAACCTCAACATCCCGATCAA
GTCAGTCGCCGAGAGACTTGGAGAAGGAAGAGCGGGAAAAAGGGAATACG
AAGTTCGGCCAGGGTGACTTTGAGGGGGCTGTGAAGAGCTATACGAGGTG
CCTGGGCATGAACAGCAAGAGCTCGCTGGCTTTCTCGAACAGGGCTATGG
CGAACCTCAAGCTGAAGGAGTTCGGGAAGGCAGAATCCGATGCCGATGCG
GCCTTGAGGGTGGATCCGCGCCACGTTAAATCTCTCCAGCGGCGAGCAGC
GGCGAGGAACGCTCTTGGGAAGCACCGTGCTGCGCTGGGTGACCTGCAAA
CAGCAGCGGAAATCGATCCAACCTCGAAGCAGGTTCGAAAAGACCTCAGC
AAAACGCTGGAAACTTTGAAGACAGTTGTGCGCCGTGCGCCGAAGACGCA
TGTTCGGGTGGAGAGCTTCCCTCTCCCTGCCCCCAAGCCTCGTGGGTACT
CTCAACCAGGCACACCTATTGAAGAGGGTCTTCCACCCACCGTAACAAAC
GCTGCCGTATCCGCCACAAATCACAATGCTTCAGTGACCGGGGATGAGGA
CACAGCTGCGCCGTATTCCTCAGTGTTGCAAGAGAGCACGGACAAGCGTG
CCACCAATGAGGCCACCGTCTACTCGTATCAAGCACGGACAGTTGTCGAA
GAGCTCCCTGATGAAGCGGAGGCCACCCTGGCTACTCCCATACCTTCACC
ACGAGCACCCACGAACGCAGTATCGTCAGTGCAAAGTGTCTCGTTGCCAA
CGGCTTCGATCGCGGTGGCCGCTCAGAATGAGCGAGGAGGGGACGCCGTA
CCACGTTCTTACGGCAGGGTAGATCGGGATATTACGGTAGACCCAGCAGG
AGATAAACCAAAGATTGCTACCGTAGAAGGTAGTTTCACTAAGACGACAA
CGCCAGGGGCCGCAACACCATCAGAAGTGACCGACGTCGCTGCAGCGCAT
ACAGTCCGCCCGGCAGTCTCAACGGATTTGGCGTCGAAAACGGGCCCGCC
CGCGCTCTCGCTCGTGGATGTTGGCGCGAAAGAGGTGACTGAGCAAGCAA
GTGCCGGTGGCGAGGGCAATAGTCTGTCTCGAGGAGCTCATCCTGTGAAA
GAGGAGGCAACCTGCCCGTCGCTTGAGGCGAGAACGGAAGGCAAGGAGCT
ATGTGCGCCGACCCAAACACCCCAGCAGGGTAGGCCGTCTACTCCCGCTC
CCGCTTGTAGGGCGATGGCTCACGCGCTGCAGCTACCCACCACGGGCTAC
CAGTTTGAAAGTATGTGGCGCGGCACAGATGGGTCGCCTGAAGGACGGCT
TGAGCTGCTGCGGGCCGTCCCGCCATCGACTATCGCCAAAATCTTCCGCC
GAACCCCTATCGAAGTAGAGTTGTTGGGCAGCGTTTTGCAAGAACTGGGA
AAGGCTTTTCTGCCCAGGAGGCCGGCAACGGCTCTGCGGTGGCTCAAGAG
CCTTTCTAAAGCGTCTCGGTTCAGCATGACGGTGGCCCTTCTCGGCGAAG
AGGACGGTCGCGCAGCCGCGCGAGAAGTGCTAAGGCGGCTTGAGGCAGCA
TCGCCGACGAAAGTGGACCCAAAAGATGTTGATGTCTTGAGGAAGCAGTT
CTCGTGTTAG
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