prot_Ecto-sp6_S_contig9.18004.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18004.1
Unique Nameprot_Ecto-sp6_S_contig9.18004.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length147
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18004.1 vs. uniprot
Match: A0A6H5L869_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L869_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.220e-32
Identity = 86/147 (58.50%), Postives = 91/147 (61.90%), Query Frame = 0 
Query:    2 RNGEAKRGRNVAAPQQGDGGGRRACAST-KVRRKIQGRMGGHADASAGAGKKKNMRPATERATTTXXXXXXXXXXXXXXXXXXXEDREAKKHANSAKPKLTMKIATSCWKRRKVEYERDEENGRQPRVASSTLKATTVGRKRRIFES 147
            RNG+AKRGR+VAAPQQ D GGRR+CAST K RRKIQGR  GHADASAGAGKKKNM PATERA TT                   EDR AKKH +SA                        ENGRQPR+ASSTLKAT   RKRRIFES
Sbjct:  452 RNGDAKRGRSVAAPQQEDVGGRRSCASTGKARRKIQGRARGHADASAGAGKKKNMGPATERAATTIATTKVTLTERERRVRSESEDRGAKKHVSSA------------------------ENGRQPRIASSTLKATISRRKRRIFES 574
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L869_9PHAE1.220e-3258.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:184830..185270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18004.1mRNA_Ecto-sp6_S_contig9.18004.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 184830..185271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18004.1 ID=prot_Ecto-sp6_S_contig9.18004.1|Name=mRNA_Ecto-sp6_S_contig9.18004.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=147bp
KRNGEAKRGRNVAAPQQGDGGGRRACASTKVRRKIQGRMGGHADASAGAG
KKKNMRPATERATTTPATTKVTPTDRERRVRSESEDREAKKHANSAKPKL
TMKIATSCWKRRKVEYERDEENGRQPRVASSTLKATTVGRKRRIFES
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