prot_Ecto-sp6_S_contig9.17999.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.17999.1
Unique Name	prot_Ecto-sp6_S_contig9.17999.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	382

Homology

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.680e-27
Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = 0

Query:  262 IDTEEVPREGLPDT-TEDPVHDNNINCLRQAFDRWLPHAWVTAKWLWGLVMALFFGAVVVGIVEEKDVLWKSCLAAAGLLLASAIVASVFAYRFGTHGPCS--EQGQTGGQHETPVEVIAAF 380
            IDT + P EGL D  TEDP      NC+R+AF  WLPHAW TAKWL+GL + LF  AVV GIVE+K+ LWKS L    +L+  ++VASVFAY       C   EQGQ+GGQH TP +V+AAF
Sbjct:  682 IDTGKDPFEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKWLFGLAVVLFTTAVVAGIVEDKETLWKSSLGVCCVLMVFSVVASVFAY-------CGDREQGQSGGQHGTPEDVVAAF 796

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.930e-13
Identity = 152/216 (70.37%), Postives = 170/216 (78.70%), Query Frame = 0

Query:    2 NLSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQNLTALEALTLFXXXXXXXXXXXXXXXXXXXXXLLDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNPLECLPTTTLPELDDDDLSDADRVIVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTC 217
            +LS C +AD D + GDLA CLDAAGRES+  L+L  +++TTLP+G+F +LT++E L +  XXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          TTL    DDD   AD + VD YG ECGC++ GV  NVCGA+ CT GPVGYTC
Sbjct:   83 DLSECLVADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTSMETLHIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETTLAAAADDD---ADGLHVDTYGTECGCAVTGVT-NVCGAETCTPGPVGYTC 294

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 4.010e-11
Identity = 124/217 (57.14%), Postives = 142/217 (65.44%), Query Frame = 0

Query:    2 NLSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQNLTALEALTLFXXXXXXXXXXXXXXXXXXXXXLLDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNPLECLPTTTLPELDDDDLSDADRVIVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTCA 218
            +LS C IAD D + GDLA CLDAAGRES+  L+L  +++TTLP+G+F +LTA+E L +                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + LE +         DDD   AD + VD YG ECGC++ GV  NVCGA+ CT GPVGY CA
Sbjct:   75 DLSECLIADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTAMETLHI----------------------------------DVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSALEIMAAAA-----DDD---ADGLHVDTYGTECGCAVTGVT-NVCGAETCTPGPVGYICA 248

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: A0A6H5KAC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC1_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 7.320e-9
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0

Query:    2 NLSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQNLTALEAL 57
            +L  C IAD D +  DLA CL+AAG E+IT L L+ +E+TTLPEGIF  LTALE L
Sbjct:   31 SLGLCGIADTDFD--DLASCLEAAGPETITTLYLSVNELTTLPEGIFGGLTALETL 84

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.670e-8
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0

Query:    1 RNLSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQNLTALEA 56
            R L+ C I D D +GGDLA CLD AGRE + EL L+ + +TTLP GIF+ LT L+A
Sbjct:   81 RRLNDCGITDEDVDGGDLASCLDNAGRELVVELWLSSNALTTLPAGIFEGLTVLDA 136

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.200e-7
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0

Query:  168 LPELDDDDLSDADRV--IVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTCAT 219
            L ELDDD +S  D V   +D YG ECGCSI GV DNVCG ++CT GP GYTC T
Sbjct:  306 LGELDDDTISYNDIVGLRIDPYGEECGCSILGVTDNVCGEEICTPGPQGYTCDT 359

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.570e-7
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 0

Query:  165 TTTLPELDDDDLSDADRVIVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTCA 218
            +TTL E+DDD    +D + VDAYG ECGCSI GV DNVCG + CT G  GYTCA
Sbjct:  194 STTLVEVDDDV---SDGLHVDAYGDECGCSITGVVDNVCGEETCTPGDEGYTCA 244

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.990e-7
Identity = 51/124 (41.13%), Postives = 61/124 (49.19%), Query Frame = 0

Query:  164 PTTTLPELDDDDLSDADRVIVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTCATS---------------------SGQGSPSDAAAIIAGVLS---AAAVVLVALAVCLTRRKIAKRNAID 263
            P+TTL E+DD        + VD YG ECGCSI GV DNVCG + CT G  GYTCA +                     S  GS S+  A  AGV+    A A+ L AL   L RR++AK    D
Sbjct:  138 PSTTLVEVDDYASFYEIGLHVDPYGDECGCSIEGVIDNVCGQEACTPGDEGYTCAVTLAPAPAPALGTTAPESTPHPTSVPGSSSEGDASTAGVVVGVVAGALALAALGFFLRRRRVAKSTGPD 261

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: A0A6H5K2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.100e-7
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query:    3 LSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQNLTALEAL 57
            L  C   DAD +  DLA CL+AAG E+IT L L  +E+TTLPEGIF  LTALE L
Sbjct:   43 LGLCGTTDADFD--DLASCLEAAGPETITTLYLYRNELTTLPEGIFGGLTALETL 95

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.370e-7
Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0

Query:  163 LPTTTLPELDDDDLSDADRV--IVDAYGIECGCSIPGVNDNVCGAQVCTAGPVGYTCATSSGQGSPSDA 229
            +PT  L E DDD +S  D V   VD YG ECGCSI GV DNVC  ++CT GP GY CA      +P+ A
Sbjct:  156 IPTLGLGERDDDTISYNDIVGLRVDPYGEECGCSILGVTDNVCDDEICTPGPQGYNCAPVPDTPAPTSA 224

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.17999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A6H5K8T1_9PHAE	2.680e-27	55.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7X7_ECTSI	3.930e-13	70.37	ATP binding / amino acid binding / protein kinase/...	[more]
A0A6H5KF25_9PHAE	4.010e-11	57.14	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A6H5KAC1_9PHAE	7.320e-9	60.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FL57_ECTSI	3.670e-8	57.14	Hypothetical leucine rich repeat kinase n=1 Tax=Ec...	[more]
D7FN19_ECTSI	1.200e-7	62.96	Putative CTR1-like protein kinase/ leucine rich re...	[more]
D8LH32_ECTSI	1.570e-7	62.96	Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca...	[more]
D7FRQ5_ECTSI	1.990e-7	41.13	Similar to CG1848-PA, isoform A/ leucine rich repe...	[more]
A0A6H5K2E6_9PHAE	3.100e-7	60.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KA37_9PHAE	6.370e-7	52.17	Protein kinase domain-containing protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 147..170 e-value: 3.3 score: 16.7 coord: 99..122 e-value: 6.5E-4 score: 29.0 coord: 28..50 e-value: 34.0 score: 8.9 coord: 51..74 e-value: 0.61 score: 19.1 coord: 75..98 e-value: 4.1E-4 score: 29.7 coord: 123..146 e-value: 0.37 score: 19.9
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 149..164 e-value: 0.31 score: 11.8
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 78..136 e-value: 4.1E-14 score: 52.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 3..184 e-value: 1.4E-39 score: 137.4
None	No IPR available	PANTHER	PTHR45836:SF11	RETICULON-4 RECEPTOR-LIKE 1	coord: 31..193 coord: 72..166
None	No IPR available	PANTHER	PTHR45836	FAMILY NOT NAMED	coord: 31..193 coord: 72..166
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 353..381
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 329..352
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 324..328
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 252..304
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..228
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 305..323
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 229..251
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 28..168
None	No IPR available	TMHMM	TMhelix		coord: 333..355
None	No IPR available	TMHMM	TMhelix		coord: 301..323
None	No IPR available	TMHMM	TMhelix		coord: 229..251

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:147177..152234 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.17999.1	mRNA_Ecto-sp6_S_contig9.17999.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 146991..152234 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.17999.1 ID=prot_Ecto-sp6_S_contig9.17999.1|Name=mRNA_Ecto-sp6_S_contig9.17999.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=382bp
RNLSYCEIADADAEGGDLALCLDAAGRESITELNLTFSEITTLPEGIFQN
LTALEALTLFVNDLSTLPERSFEGLTALELLLLDDNELTTLPGGVFQGLT
ALKQLSLVRNSLSTLPEGIFQDLESLEWLYLGYTDLITLPEGIFQSLTSL
KILNLTGNPLECLPTTTLPELDDDDLSDADRVIVDAYGIECGCSIPGVND
NVCGAQVCTAGPVGYTCATSSGQGSPSDAAAIIAGVLSAAAVVLVALAVC
LTRRKIAKRNAIDTEEVPREGLPDTTEDPVHDNNINCLRQAFDRWLPHAW
VTAKWLWGLVMALFFGAVVVGIVEEKDVLWKSCLAAAGLLLASAIVASVF
AYRFGTHGPCSEQGQTGGQHETPVEVIAAFG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf