prot_Ecto-sp6_S_contig9.17997.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.17997.1
Unique Nameprot_Ecto-sp6_S_contig9.17997.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: A0A6H5LR56_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LR56_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 7.540e-43
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 MRRSVSSMLQNRSSFARIGIRRGSKTTTTSQRQVDVGQVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG 83
            MR SVSSM QNRSSFARIGIRRGSKTTTTSQRQVDVGQVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG
Sbjct:    1 MRGSVSSMFQNRSSFARIGIRRGSKTTTTSQRQVDVGQVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG 83          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: D7G8I3_ECTSI (Acetoacetate--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I3_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 4.830e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0
Query:   53 MDAFARLAGERSGRDLRSWPDLHRWSVSEVG 83
            MDAFARLAGERSGRDLRSWPDLHRWSVSEVG
Sbjct:    1 MDAFARLAGERSGRDLRSWPDLHRWSVSEVG 31          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: UPI00196230E0 (acetoacetate--CoA ligase n=1 Tax=Nakamurella flavida TaxID=363630 RepID=UPI00196230E0)

HSP 1 Score: 55.1 bits (131), Expect = 6.790e-7
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   36 VGQVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG 83
            V +V+W+P  +R+  + + AFARLAG+R+GRDL  + DL +WSV ++G
Sbjct:    7 VPEVLWTPRPERVEGAAITAFARLAGDRAGRDLTGYDDLWQWSVDDLG 54          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: UPI000BA3E135 (acetoacetate--CoA ligase n=1 Tax=Pseudomonas sp. Irchel 3E20 TaxID=2008983 RepID=UPI000BA3E135)

HSP 1 Score: 52.4 bits (124), Expect = 6.050e-6
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   39 VMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSE 81
            ++W PS +RIR SR+ AFARL  +R G  LR +P LH+WS+ +
Sbjct:    4 ILWQPSAERIRASRLHAFARLLHDRHGIALRDYPSLHQWSIDQ 46          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: UPI000EAD2897 (acetoacetate--CoA ligase n=1 Tax=Pseudomonas urumqiensis TaxID=638269 RepID=UPI000EAD2897)

HSP 1 Score: 51.2 bits (121), Expect = 1.550e-5
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   38 QVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSE 81
            Q +W+PS  RI D+RMDAF R   ER   DL  +P LH+WS+ +
Sbjct:    3 QPLWTPSADRIADTRMDAFRRFVNERHTLDLADYPALHQWSIDQ 46          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: A0A2H0A7A7_9DELT (Acetoacetate--CoA ligase (Fragment) n=1 Tax=Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_51_8 TaxID=1973983 RepID=A0A2H0A7A7_9DELT)

HSP 1 Score: 48.9 bits (115), Expect = 6.480e-5
Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   36 VGQVMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEV 82
            + +++W PS +RIR +RM  F     +R G +L+S+PDL++WSV+ +
Sbjct:    1 MSRILWQPSAERIRQTRMVRFIGFVNDRFGLNLKSYPDLYQWSVTRI 47          
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Match: A0A117T2V9_KOCRH (Acetoacetate--CoA ligase n=13 Tax=Kocuria TaxID=57493 RepID=A0A117T2V9_KOCRH)

HSP 1 Score: 49.3 bits (116), Expect = 7.400e-5
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
Query:   39 VMWSPSQQRIRDSRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG 83
            ++W PS + +RDSRM AFAR   E  G  L  +  LH WSVS++G
Sbjct:   12 LLWEPSPEAVRDSRMAAFARWVEESRGLSLPGFTSLHEWSVSDLG 56          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.17997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5LR56_9PHAE7.540e-4397.59AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
D7G8I3_ECTSI4.830e-12100.00Acetoacetate--CoA ligase n=1 Tax=Ectocarpus silicu... [more]
UPI00196230E06.790e-747.92acetoacetate--CoA ligase n=1 Tax=Nakamurella flavi... [more]
UPI000BA3E1356.050e-651.16acetoacetate--CoA ligase n=1 Tax=Pseudomonas sp. I... [more]
UPI000EAD28971.550e-550.00acetoacetate--CoA ligase n=1 Tax=Pseudomonas urumq... [more]
A0A2H0A7A7_9DELT6.480e-540.43Acetoacetate--CoA ligase (Fragment) n=1 Tax=Desulf... [more]
A0A117T2V9_KOCRH7.400e-548.89Acetoacetate--CoA ligase n=13 Tax=Kocuria TaxID=57... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:130299..132190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.17997.1mRNA_Ecto-sp6_S_contig9.17997.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 130279..132190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.17997.1 ID=prot_Ecto-sp6_S_contig9.17997.1|Name=mRNA_Ecto-sp6_S_contig9.17997.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=83bp
MRRSVSSMLQNRSSFARIGIRRGSKTTTTSQRQVDVGQVMWSPSQQRIRD
SRMDAFARLAGERSGRDLRSWPDLHRWSVSEVG
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