prot_Ecto-sp6_S_contig89.17915.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17915.1
Unique Nameprot_Ecto-sp6_S_contig89.17915.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length249
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17915.1 vs. uniprot
Match: D8LKG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG8_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 9.110e-151
Identity = 210/248 (84.68%), Postives = 224/248 (90.32%), Query Frame = 0
Query:    1 MSQDNPTYVPVGGEFDEGRPVALPLHRQRDARGVVPPSRGRRREWWWQPGPVDTVGFCWDLDMGMGLLAAVDLARGILSFASIGYRLAADKSTVVAQKREEEFARDCEGLEEMPYKCERLINSILELTLANDTLVPNVLAAAVLVMLGLIGLRAWWCFDARAAKFNLWLRPLMYLMFAVVMAIQVTKEMSYGRHPEWGAFVFVLLCMVLHMMYLSKATWSYHIFLLKKTSRAIRKAGMVELDATSPTV 248
            M Q NP YV VGGEFDEGRPVALPLHRQRDARGVVPPSRGRR+EWWWQPGPVDTVGFCWDLDMG+GL A  +L  GIL+FASIG+RLAAD STVV Q++EEEFARDCEGLE+MPYKCERLI SILELTLANDTLVPNVLAAAVL+MLG +GLRAWWCFDARAAKFNLWLRPLM+LM AVVMAI+VTKEMSYGRHP W  +VF LL MVL MMY SK  WSYHIFLLKKTSRA R+AGMVELDATSPTV
Sbjct:    1 MPQGNPVYVRVGGEFDEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPGPVDTVGFCWDLDMGVGLNAVGELVYGILAFASIGHRLAADTSTVVVQEKEEEFARDCEGLEQMPYKCERLIGSILELTLANDTLVPNVLAAAVLLMLGWLGLRAWWCFDARAAKFNLWLRPLMFLMSAVVMAIRVTKEMSYGRHPVWDLYVFWLLLMVLSMMYSSKVMWSYHIFLLKKTSRATREAGMVELDATSPTV 248          
BLAST of mRNA_Ecto-sp6_S_contig89.17915.1 vs. uniprot
Match: D8LNW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW6_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.840e-27
Identity = 79/246 (32.11%), Postives = 120/246 (48.78%), Query Frame = 0
Query:    8 YVPVGGEFDEGRPVALPLHRQRDARGVVPPSRGRRREWWWQPGPVDTVGFCWDLDMGMGLLAAVDL-ARGILSFASIGYRLAADKSTVVAQKREEEFARDCEGLEEMPYKCERLINSILELTLANDTLVPNVLAAAVLVMLGLIGLRAWWCFDARAAKFNLWLRPLMYLMFAVVMAIQVTKEMSYGRHPEWGAFVFVLLCMVLHMMYLSKATWSYHIFLLKKTSRAIRKA----GMVELDATSPTV 248
            YVPVG EFD GRP+   + R     GV       R++WWWQPGPVD+    + L  G+ +LAA+D+   G +    + +         +    E+++A +CE + E    C    + IL L   ND  VP VL   +  + G +GLRA +  DA AA+  LW  P   ++  V + +Q  +   Y     WG  V   +  VL + Y  K  WSY + ++++ +RA   A    G +ELD +  +V
Sbjct:   11 YVPVGSEFDGGRPLGERV-RFNGVGGV-------RKDWWWQPGPVDSXXXXFSLAAGVAVLAALDIIVLGAMRLYYVSFVTGDAGLKQLLAGFEKKYAEECEDVAEASADCLAQASIILSLNKTNDLYVPAVLQGVIAAIFGFVGLRAVFAHDALAARAYLWSWPPRIVLTLVELVMQRIRFERYDMGFLWGFTVVWNIPRVLILAYCLKVAWSYWV-VVRRNNRAAATAADTSGSIELDGSRSSV 247          
BLAST of mRNA_Ecto-sp6_S_contig89.17915.1 vs. uniprot
Match: D8LNW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW7_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.720e-10
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 0
Query:   40 GRRREWWWQPGPVDTVGFCWDLDMGMGLLAAVDL-ARGILSFASIGYRLAADKSTVVA-QKREEEFARDCEGLEEMPYKCERLINSI----LELTLANDTLVPNVLAAAVLVMLGLIGLRAWWCFDARAAKFNLWL-RPLMYLMFAVVMAIQVTKEMSYGRHPEWGAFVFV-LLCMVLHMMYLSKATWSYHIFLLKKTSRAIRKAGMVE 240
            G RR+WWWQPGPVD+  FC  L  G+G+LAA DL   GI S  +   R   +K    A +  +  + +DC+        C +L ++I     E+ L ++  V   + A + ++ G +GL A +  +A +AK  LW+  P  ++       ++   +  YG     G  V +  L  V+  +Y  K  WS+H  L  ++  +   +G VE
Sbjct:   24 GVRRQWWWQPGPVDSCCFCCSLRAGVGILAANDLFLNGIWS--TFYSRSHIEKMLHAAIEILQSVYDKDCKDAPVQTEDCLQLSHNIEQAEFEVELFDNLPVIVYVEAIIAMLAGAVGLFAVFKSNALSAKIYLWMWLPRFFVGLVAKYTLRAVMK-QYGIDNSDGPGVVIGHLVDVVVFLYFVKVAWSFHQRLKARSGNSSSPSGGVE 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKG8_ECTSI9.110e-15184.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNW6_ECTSI4.840e-2732.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNW7_ECTSI1.720e-1029.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..196
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 201..223
NoneNo IPR availableTMHMMTMhelixcoord: 167..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:105393..111585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17915.1mRNA_Ecto-sp6_S_contig89.17915.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 105266..112157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17915.1 ID=prot_Ecto-sp6_S_contig89.17915.1|Name=mRNA_Ecto-sp6_S_contig89.17915.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=249bp
MSQDNPTYVPVGGEFDEGRPVALPLHRQRDARGVVPPSRGRRREWWWQPG
PVDTVGFCWDLDMGMGLLAAVDLARGILSFASIGYRLAADKSTVVAQKRE
EEFARDCEGLEEMPYKCERLINSILELTLANDTLVPNVLAAAVLVMLGLI
GLRAWWCFDARAAKFNLWLRPLMYLMFAVVMAIQVTKEMSYGRHPEWGAF
VFVLLCMVLHMMYLSKATWSYHIFLLKKTSRAIRKAGMVELDATSPTV*
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